EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000023943 (Gene tree)
Gene ID: 111838675
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12457 bases
Position: chrPGUA01000665.1:44552-57008
Accession: 111838675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000008476	Nucleoplasmin	PF03066.15	7.9e-32	1	1
ENSPKIP00000008462	Nucleoplasmin	PF03066.15	3.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000032556	-	1434	-	ENSPKIP00000008476	270 (aa)	-	-
ENSPKIT00000032542	-	1527	-	ENSPKIP00000008462	301 (aa)	XP_023657675	UPI000CD5E875

Gene Model

Click here to download ENSPKIG00000023943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000023943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000023943	npm1a	96	40.260	ENSPKIG00000020050	npm1b	95	38.961
ENSPKIG00000023943	npm1a	55	33.533	ENSPKIG00000009700	npm2b	54	40.187

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000023943	npm1a	100	57.566	ENSAPOG00000002813	npm1a	100	58.553	Acanthochromis_polyacanthus
ENSPKIG00000023943	npm1a	94	55.986	ENSACIG00000014201	npm1a	100	55.986	Amphilophus_citrinellus
ENSPKIG00000023943	npm1a	89	53.532	ENSAOCG00000004978	npm1a	100	57.806	Amphiprion_ocellaris
ENSPKIG00000023943	npm1a	100	58.361	ENSAPEG00000008594	npm1a	100	58.361	Amphiprion_percula
ENSPKIG00000023943	npm1a	100	56.550	ENSATEG00000008885	npm1a	99	56.958	Anabas_testudineus
ENSPKIG00000023943	npm1a	97	50.512	ENSACLG00000008376	npm1a	97	50.566	Astatotilapia_calliptera
ENSPKIG00000023943	npm1a	99	53.199	ENSAMXG00000010155	npm1a	99	54.849	Astyanax_mexicanus
ENSPKIG00000023943	npm1a	100	44.884	ENSCSEG00000011165	npm1a	100	59.477	Cynoglossus_semilaevis
ENSPKIG00000023943	npm1a	100	53.770	ENSCVAG00000008960	npm1a	100	55.082	Cyprinodon_variegatus
ENSPKIG00000023943	npm1a	98	58.983	ENSDARG00000014329	npm1a	100	57.627	Danio_rerio
ENSPKIG00000023943	npm1a	92	35.294	ENSEBUG00000012753	npm1a	86	36.184	Eptatretus_burgeri
ENSPKIG00000023943	npm1a	100	58.361	ENSELUG00000013705	npm1a	100	58.497	Esox_lucius
ENSPKIG00000023943	npm1a	100	56.066	ENSFHEG00000012496	npm1a	100	56.393	Fundulus_heteroclitus
ENSPKIG00000023943	npm1a	100	55.340	ENSGAFG00000013059	npm1a	100	55.340	Gambusia_affinis
ENSPKIG00000023943	npm1a	99	50.165	ENSGACG00000020319	npm1a	99	48.505	Gasterosteus_aculeatus
ENSPKIG00000023943	npm1a	99	54.232	ENSHBUG00000000776	npm1a	100	54.232	Haplochromis_burtoni
ENSPKIG00000023943	npm1a	100	48.397	ENSHCOG00000001059	npm1a	100	47.756	Hippocampus_comes
ENSPKIG00000023943	npm1a	98	57.616	ENSIPUG00000019452	npm1	99	57.616	Ictalurus_punctatus
ENSPKIG00000023943	npm1a	100	52.632	ENSKMAG00000010709	npm1a	100	52.632	Kryptolebias_marmoratus
ENSPKIG00000023943	npm1a	100	54.605	ENSLBEG00000008793	npm1a	100	55.263	Labrus_bergylta
ENSPKIG00000023943	npm1a	85	58.242	ENSLOCG00000009683	npm1a	99	58.242	Lepisosteus_oculatus
ENSPKIG00000023943	npm1a	100	56.436	ENSMAMG00000009344	npm1a	83	56.436	Mastacembelus_armatus
ENSPKIG00000023943	npm1a	99	54.717	ENSMZEG00005013717	npm1a	100	55.346	Maylandia_zebra
ENSPKIG00000023943	npm1a	95	56.897	ENSMMOG00000007980	npm1a	100	56.897	Mola_mola
ENSPKIG00000023943	npm1a	100	51.634	ENSMALG00000001146	npm1a	100	52.614	Monopterus_albus
ENSPKIG00000023943	npm1a	99	53.125	ENSNBRG00000013172	npm1a	100	52.812	Neolamprologus_brichardi
ENSPKIG00000023943	npm1a	99	52.980	ENSONIG00000001860	npm1a	98	54.636	Oreochromis_niloticus
ENSPKIG00000023943	npm1a	100	56.066	ENSORLG00000010179	npm1a	100	55.738	Oryzias_latipes
ENSPKIG00000023943	npm1a	100	55.082	ENSORLG00020020817	npm1a	100	54.754	Oryzias_latipes_hni
ENSPKIG00000023943	npm1a	100	56.066	ENSORLG00015003439	npm1a	100	55.738	Oryzias_latipes_hsok
ENSPKIG00000023943	npm1a	100	54.125	ENSOMEG00000007083	npm1a	100	54.125	Oryzias_melastigma
ENSPKIG00000023943	npm1a	100	48.845	ENSPMGG00000011716	npm1a	100	48.845	Periophthalmus_magnuspinnatus
ENSPKIG00000023943	npm1a	100	54.369	ENSPFOG00000019173	npm1a	100	54.369	Poecilia_formosa
ENSPKIG00000023943	npm1a	100	51.961	ENSPLAG00000001093	npm1a	100	51.634	Poecilia_latipinna
ENSPKIG00000023943	npm1a	100	54.369	ENSPMEG00000012523	npm1a	100	54.369	Poecilia_mexicana
ENSPKIG00000023943	npm1a	100	52.961	ENSPREG00000001647	npm1a	100	54.870	Poecilia_reticulata
ENSPKIG00000023943	npm1a	99	55.096	ENSPNYG00000019321	npm1a	100	55.096	Pundamilia_nyererei
ENSPKIG00000023943	npm1a	99	54.455	ENSPNAG00000026891	npm1a	99	54.248	Pygocentrus_nattereri
ENSPKIG00000023943	npm1a	100	65.563	ENSSFOG00015007074	npm1a	100	65.563	Scleropages_formosus
ENSPKIG00000023943	npm1a	100	56.066	ENSSMAG00000019090	npm1a	100	56.066	Scophthalmus_maximus
ENSPKIG00000023943	npm1a	100	53.947	ENSSDUG00000015609	npm1a	100	53.947	Seriola_dumerili
ENSPKIG00000023943	npm1a	100	56.250	ENSSLDG00000017849	npm1a	100	56.250	Seriola_lalandi_dorsalis
ENSPKIG00000023943	npm1a	94	53.725	ENSSPAG00000021660	npm1a	93	59.184	Stegastes_partitus
ENSPKIG00000023943	npm1a	100	58.170	ENSTRUG00000024003	npm1a	100	58.824	Takifugu_rubripes
ENSPKIG00000023943	npm1a	100	53.947	ENSTNIG00000010773	npm1a	100	53.947	Tetraodon_nigroviridis
ENSPKIG00000023943	npm1a	99	47.351	ENSXCOG00000005958	npm1a	100	50.000	Xiphophorus_couchianus
ENSPKIG00000023943	npm1a	100	52.769	ENSXMAG00000000396	npm1a	100	53.698	Xiphophorus_maculatus