EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000024588 (Gene tree)
Gene ID: 111840582
Gene Symbol: stau1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 12639 bases
Position: chrPGUA01000080.1:237577-250215
Accession: 111840582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000009511	dsrm	PF00035.26	4.4e-47	1	4
ENSPKIP00000009511	dsrm	PF00035.26	4.4e-47	2	4
ENSPKIP00000009511	dsrm	PF00035.26	4.4e-47	3	4
ENSPKIP00000009511	dsrm	PF00035.26	4.4e-47	4	4
ENSPKIP00000009531	dsrm	PF00035.26	4.4e-47	1	4
ENSPKIP00000009531	dsrm	PF00035.26	4.4e-47	2	4
ENSPKIP00000009531	dsrm	PF00035.26	4.4e-47	3	4
ENSPKIP00000009531	dsrm	PF00035.26	4.4e-47	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000033643	-	2262	-	ENSPKIP00000009531	695 (aa)	XP_023661327	UPI000CD5ED91
ENSPKIT00000033623	-	2499	-	ENSPKIP00000009511	695 (aa)	XP_023661327	UPI000CD5ED91

Gene Model

Click here to download ENSPKIG00000024588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000024588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000024588	stau1	70	46.813	ENSPKIG00000006663	stau2	86	46.032

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000024588	stau1	93	72.171	ENSG00000124214	STAU1	99	74.451	Homo_sapiens
ENSPKIG00000024588	stau1	100	79.571	ENSAPOG00000017260	stau1	100	79.173	Acanthochromis_polyacanthus
ENSPKIG00000024588	stau1	99	70.756	ENSAMEG00000013681	STAU1	99	70.756	Ailuropoda_melanoleuca
ENSPKIG00000024588	stau1	100	79.023	ENSACIG00000015918	stau1	100	79.023	Amphilophus_citrinellus
ENSPKIG00000024588	stau1	100	80.884	ENSAOCG00000012224	stau1	100	80.314	Amphiprion_ocellaris
ENSPKIG00000024588	stau1	100	80.884	ENSAPEG00000012308	stau1	100	80.314	Amphiprion_percula
ENSPKIG00000024588	stau1	100	80.484	ENSATEG00000024600	stau1	100	80.448	Anabas_testudineus
ENSPKIG00000024588	stau1	99	73.955	ENSAPLG00000010527	STAU1	99	73.955	Anas_platyrhynchos
ENSPKIG00000024588	stau1	99	73.513	ENSACAG00000015909	STAU1	99	73.513	Anolis_carolinensis
ENSPKIG00000024588	stau1	93	71.009	ENSANAG00000032714	STAU1	99	70.459	Aotus_nancymaae
ENSPKIG00000024588	stau1	100	79.743	ENSACLG00000012270	stau1	100	79.173	Astatotilapia_calliptera
ENSPKIG00000024588	stau1	82	82.411	ENSAMXG00000016812	stau1	99	81.423	Astyanax_mexicanus
ENSPKIG00000024588	stau1	93	72.356	ENSBTAG00000000241	STAU1	95	72.710	Bos_taurus
ENSPKIG00000024588	stau1	93	71.800	ENSCJAG00000016233	STAU1	95	72.150	Callithrix_jacchus
ENSPKIG00000024588	stau1	93	74.125	ENSCAFG00000011347	STAU1	96	72.366	Canis_familiaris
ENSPKIG00000024588	stau1	93	72.366	ENSCAFG00020017123	STAU1	99	73.813	Canis_lupus_dingo
ENSPKIG00000024588	stau1	93	71.614	ENSCHIG00000001799	-	95	71.963	Capra_hircus
ENSPKIG00000024588	stau1	93	73.152	ENSTSYG00000036179	-	95	72.500	Carlito_syrichta
ENSPKIG00000024588	stau1	72	72.455	ENSCAPG00000017041	STAU1	99	72.255	Cavia_aperea
ENSPKIG00000024588	stau1	71	70.600	ENSCPOG00000005566	STAU1	99	70.600	Cavia_porcellus
ENSPKIG00000024588	stau1	93	71.009	ENSCCAG00000034339	STAU1	95	71.349	Cebus_capucinus
ENSPKIG00000024588	stau1	93	73.760	ENSCATG00000028474	STAU1	99	73.373	Cercocebus_atys
ENSPKIG00000024588	stau1	71	73.400	ENSCLAG00000006516	-	99	73.400	Chinchilla_lanigera
ENSPKIG00000024588	stau1	71	60.000	ENSCLAG00000002784	-	100	60.000	Chinchilla_lanigera
ENSPKIG00000024588	stau1	72	74.451	ENSCSAG00000014986	STAU1	99	74.451	Chlorocebus_sabaeus
ENSPKIG00000024588	stau1	93	72.222	ENSCHOG00000001511	STAU1	95	72.575	Choloepus_hoffmanni
ENSPKIG00000024588	stau1	99	74.646	ENSCPBG00000026741	STAU1	99	74.646	Chrysemys_picta_bellii
ENSPKIG00000024588	stau1	93	72.171	ENSCANG00000039220	STAU1	95	72.523	Colobus_angolensis_palliatus
ENSPKIG00000024588	stau1	71	70.400	ENSCGRG00001013453	Stau1	99	70.400	Cricetulus_griseus_chok1gshd
ENSPKIG00000024588	stau1	71	70.400	ENSCGRG00000007216	Stau1	99	70.400	Cricetulus_griseus_crigri
ENSPKIG00000024588	stau1	100	71.167	ENSCSEG00000000792	stau1	100	71.167	Cynoglossus_semilaevis
ENSPKIG00000024588	stau1	93	76.877	ENSCVAG00000005906	stau1	100	76.877	Cyprinodon_variegatus
ENSPKIG00000024588	stau1	99	79.714	ENSDARG00000044182	stau1	99	79.656	Danio_rerio
ENSPKIG00000024588	stau1	93	72.407	ENSDNOG00000014933	STAU1	93	72.575	Dasypus_novemcinctus
ENSPKIG00000024588	stau1	71	72.470	ENSDORG00000030220	Stau1	99	72.470	Dipodomys_ordii
ENSPKIG00000024588	stau1	67	74.837	ENSETEG00000018235	STAU1	79	74.837	Echinops_telfairi
ENSPKIG00000024588	stau1	92	73.375	ENSEASG00005023343	STAU1	96	73.375	Equus_asinus_asinus
ENSPKIG00000024588	stau1	93	73.457	ENSECAG00000012894	STAU1	97	73.380	Equus_caballus
ENSPKIG00000024588	stau1	57	76.633	ENSEEUG00000014344	STAU1	68	76.633	Erinaceus_europaeus
ENSPKIG00000024588	stau1	97	82.344	ENSELUG00000002529	stau1	99	81.988	Esox_lucius
ENSPKIG00000024588	stau1	93	74.514	ENSFCAG00000001447	STAU1	95	74.514	Felis_catus
ENSPKIG00000024588	stau1	99	74.714	ENSFALG00000012940	STAU1	99	74.714	Ficedula_albicollis
ENSPKIG00000024588	stau1	71	73.200	ENSFDAG00000014119	-	99	73.200	Fukomys_damarensis
ENSPKIG00000024588	stau1	72	57.485	ENSFDAG00000020837	-	99	57.285	Fukomys_damarensis
ENSPKIG00000024588	stau1	99	78.429	ENSFHEG00000013517	stau1	100	78.740	Fundulus_heteroclitus
ENSPKIG00000024588	stau1	99	69.167	ENSGMOG00000016850	stau1	99	68.194	Gadus_morhua
ENSPKIG00000024588	stau1	99	75.429	ENSGALG00000004736	STAU1	99	75.429	Gallus_gallus
ENSPKIG00000024588	stau1	99	78.714	ENSGAFG00000010437	stau1	99	77.857	Gambusia_affinis
ENSPKIG00000024588	stau1	100	78.745	ENSGACG00000001352	stau1	100	77.746	Gasterosteus_aculeatus
ENSPKIG00000024588	stau1	99	75.429	ENSGAGG00000009825	STAU1	99	75.429	Gopherus_agassizii
ENSPKIG00000024588	stau1	93	66.545	ENSGGOG00000025351	STAU1	99	75.543	Gorilla_gorilla
ENSPKIG00000024588	stau1	100	79.886	ENSHBUG00000023668	stau1	100	79.315	Haplochromis_burtoni
ENSPKIG00000024588	stau1	71	74.089	ENSHGLG00000008730	STAU1	99	74.089	Heterocephalus_glaber_female
ENSPKIG00000024588	stau1	71	74.089	ENSHGLG00100000098	STAU1	99	74.089	Heterocephalus_glaber_male
ENSPKIG00000024588	stau1	100	74.893	ENSHCOG00000018461	stau1	100	74.217	Hippocampus_comes
ENSPKIG00000024588	stau1	100	76.040	ENSIPUG00000023725	stau1	100	75.610	Ictalurus_punctatus
ENSPKIG00000024588	stau1	71	73.887	ENSSTOG00000003634	STAU1	99	73.887	Ictidomys_tridecemlineatus
ENSPKIG00000024588	stau1	71	72.874	ENSJJAG00000020032	Stau1	99	72.874	Jaculus_jaculus
ENSPKIG00000024588	stau1	99	78.129	ENSKMAG00000007135	stau1	99	77.810	Kryptolebias_marmoratus
ENSPKIG00000024588	stau1	100	79.173	ENSLBEG00000020172	stau1	100	78.602	Labrus_bergylta
ENSPKIG00000024588	stau1	98	74.785	ENSLACG00000016157	STAU1	99	71.034	Latimeria_chalumnae
ENSPKIG00000024588	stau1	99	82.734	ENSLOCG00000003134	stau1	99	82.734	Lepisosteus_oculatus
ENSPKIG00000024588	stau1	74	75.097	ENSLAFG00000003238	STAU1	99	75.097	Loxodonta_africana
ENSPKIG00000024588	stau1	93	73.760	ENSMFAG00000040931	STAU1	99	75.912	Macaca_fascicularis
ENSPKIG00000024588	stau1	93	66.545	ENSMMUG00000002302	STAU1	99	75.912	Macaca_mulatta
ENSPKIG00000024588	stau1	93	72.857	ENSMNEG00000033821	STAU1	99	73.373	Macaca_nemestrina
ENSPKIG00000024588	stau1	93	71.800	ENSMLEG00000031383	STAU1	95	72.150	Mandrillus_leucophaeus
ENSPKIG00000024588	stau1	100	80.171	ENSMAMG00000017586	stau1	100	80.419	Mastacembelus_armatus
ENSPKIG00000024588	stau1	100	79.857	ENSMZEG00005015605	stau1	100	79.286	Maylandia_zebra
ENSPKIG00000024588	stau1	99	73.816	ENSMGAG00000004719	STAU1	99	73.816	Meleagris_gallopavo
ENSPKIG00000024588	stau1	71	70.800	ENSMAUG00000013846	Stau1	99	70.800	Mesocricetus_auratus
ENSPKIG00000024588	stau1	93	70.092	ENSMICG00000001995	STAU1	95	70.425	Microcebus_murinus
ENSPKIG00000024588	stau1	71	71.200	ENSMOCG00000018743	Stau1	99	71.200	Microtus_ochrogaster
ENSPKIG00000024588	stau1	100	76.748	ENSMMOG00000015455	stau1	99	78.715	Mola_mola
ENSPKIG00000024588	stau1	96	74.594	ENSMODG00000016276	STAU1	99	74.594	Monodelphis_domestica
ENSPKIG00000024588	stau1	100	80.314	ENSMALG00000000045	stau1	100	79.458	Monopterus_albus
ENSPKIG00000024588	stau1	71	71.457	MGP_CAROLIEiJ_G0024699	Stau1	100	72.074	Mus_caroli
ENSPKIG00000024588	stau1	71	71.660	ENSMUSG00000039536	Stau1	100	72.279	Mus_musculus
ENSPKIG00000024588	stau1	71	71.457	MGP_PahariEiJ_G0026141	Stau1	99	71.457	Mus_pahari
ENSPKIG00000024588	stau1	71	71.457	MGP_SPRETEiJ_G0025619	Stau1	100	72.074	Mus_spretus
ENSPKIG00000024588	stau1	92	73.750	ENSMPUG00000017581	STAU1	95	73.750	Mustela_putorius_furo
ENSPKIG00000024588	stau1	93	73.735	ENSMLUG00000008407	STAU1	93	73.735	Myotis_lucifugus
ENSPKIG00000024588	stau1	71	72.800	ENSNGAG00000007108	Stau1	99	72.800	Nannospalax_galili
ENSPKIG00000024588	stau1	100	79.886	ENSNBRG00000017596	stau1	100	79.315	Neolamprologus_brichardi
ENSPKIG00000024588	stau1	93	71.800	ENSNLEG00000006955	STAU1	99	73.176	Nomascus_leucogenys
ENSPKIG00000024588	stau1	67	78.373	ENSMEUG00000003263	STAU1	79	78.478	Notamacropus_eugenii
ENSPKIG00000024588	stau1	73	72.125	ENSOPRG00000014569	STAU1	89	72.125	Ochotona_princeps
ENSPKIG00000024588	stau1	72	74.052	ENSODEG00000006523	STAU1	99	74.052	Octodon_degus
ENSPKIG00000024588	stau1	100	77.917	ENSONIG00000004152	stau1	99	77.191	Oreochromis_niloticus
ENSPKIG00000024588	stau1	99	72.779	ENSOANG00000006394	STAU1	99	72.779	Ornithorhynchus_anatinus
ENSPKIG00000024588	stau1	96	70.556	ENSOCUG00000006214	STAU1	99	73.346	Oryctolagus_cuniculus
ENSPKIG00000024588	stau1	99	77.794	ENSOMEG00000002388	stau1	99	76.791	Oryzias_melastigma
ENSPKIG00000024588	stau1	96	71.963	ENSOGAG00000002127	STAU1	97	71.963	Otolemur_garnettii
ENSPKIG00000024588	stau1	71	51.389	ENSOGAG00000028222	-	99	50.794	Otolemur_garnettii
ENSPKIG00000024588	stau1	93	73.302	ENSOARG00000012204	STAU1	96	73.302	Ovis_aries
ENSPKIG00000024588	stau1	93	66.545	ENSPPAG00000032023	STAU1	99	75.543	Pan_paniscus
ENSPKIG00000024588	stau1	93	74.514	ENSPPRG00000003436	STAU1	99	74.251	Panthera_pardus
ENSPKIG00000024588	stau1	93	74.514	ENSPTIG00000011768	STAU1	99	73.176	Panthera_tigris_altaica
ENSPKIG00000024588	stau1	93	66.545	ENSPTRG00000023130	STAU1	99	75.543	Pan_troglodytes
ENSPKIG00000024588	stau1	93	73.760	ENSPANG00000020560	STAU1	95	75.652	Papio_anubis
ENSPKIG00000024588	stau1	99	75.892	ENSPSIG00000010731	STAU1	99	75.892	Pelodiscus_sinensis
ENSPKIG00000024588	stau1	99	76.462	ENSPMGG00000018553	stau1	100	77.079	Periophthalmus_magnuspinnatus
ENSPKIG00000024588	stau1	71	71.200	ENSPEMG00000022045	Stau1	99	71.200	Peromyscus_maniculatus_bairdii
ENSPKIG00000024588	stau1	99	72.766	ENSPCIG00000023269	STAU1	99	75.189	Phascolarctos_cinereus
ENSPKIG00000024588	stau1	99	77.652	ENSPFOG00000017253	stau1	99	76.662	Poecilia_formosa
ENSPKIG00000024588	stau1	57	79.798	ENSPLAG00000014829	stau1	97	74.419	Poecilia_latipinna
ENSPKIG00000024588	stau1	99	74.540	ENSPMEG00000007495	stau1	99	73.550	Poecilia_mexicana
ENSPKIG00000024588	stau1	99	77.511	ENSPREG00000003477	stau1	99	76.521	Poecilia_reticulata
ENSPKIG00000024588	stau1	93	71.190	ENSPPYG00000011111	STAU1	95	71.536	Pongo_abelii
ENSPKIG00000024588	stau1	72	67.793	ENSPCAG00000002459	STAU1	91	68.136	Procavia_capensis
ENSPKIG00000024588	stau1	93	70.872	ENSPCOG00000027746	STAU1	99	72.189	Propithecus_coquereli
ENSPKIG00000024588	stau1	66	76.471	ENSPVAG00000015019	STAU1	78	76.471	Pteropus_vampyrus
ENSPKIG00000024588	stau1	100	79.886	ENSPNYG00000014436	stau1	100	79.315	Pundamilia_nyererei
ENSPKIG00000024588	stau1	100	79.403	ENSPNAG00000011323	stau1	100	78.663	Pygocentrus_nattereri
ENSPKIG00000024588	stau1	71	70.800	ENSRNOG00000007781	Stau1	99	70.800	Rattus_norvegicus
ENSPKIG00000024588	stau1	71	74.395	ENSRBIG00000037345	STAU1	99	74.194	Rhinopithecus_bieti
ENSPKIG00000024588	stau1	93	72.653	ENSRROG00000039008	STAU1	99	73.413	Rhinopithecus_roxellana
ENSPKIG00000024588	stau1	93	71.009	ENSSBOG00000034448	STAU1	99	70.949	Saimiri_boliviensis_boliviensis
ENSPKIG00000024588	stau1	96	74.397	ENSSHAG00000009492	STAU1	99	74.156	Sarcophilus_harrisii
ENSPKIG00000024588	stau1	100	90.791	ENSSFOG00015021497	stau1	100	90.791	Scleropages_formosus
ENSPKIG00000024588	stau1	100	79.315	ENSSMAG00000017410	stau1	100	78.745	Scophthalmus_maximus
ENSPKIG00000024588	stau1	100	81.170	ENSSDUG00000019439	stau1	100	80.599	Seriola_dumerili
ENSPKIG00000024588	stau1	100	81.000	ENSSLDG00000025040	stau1	100	80.599	Seriola_lalandi_dorsalis
ENSPKIG00000024588	stau1	99	74.646	ENSSPUG00000017983	STAU1	99	75.371	Sphenodon_punctatus
ENSPKIG00000024588	stau1	100	80.714	ENSSPAG00000019275	stau1	100	80.314	Stegastes_partitus
ENSPKIG00000024588	stau1	93	72.356	ENSSSCG00000027444	STAU1	99	75.331	Sus_scrofa
ENSPKIG00000024588	stau1	99	73.472	ENSTGUG00000008784	STAU1	99	73.472	Taeniopygia_guttata
ENSPKIG00000024588	stau1	100	78.336	ENSTRUG00000005837	stau1	100	78.031	Takifugu_rubripes
ENSPKIG00000024588	stau1	97	77.647	ENSTNIG00000014732	stau1	100	76.765	Tetraodon_nigroviridis
ENSPKIG00000024588	stau1	96	63.301	ENSTBEG00000009404	STAU1	99	62.764	Tupaia_belangeri
ENSPKIG00000024588	stau1	67	74.304	ENSTTRG00000004285	STAU1	79	74.348	Tursiops_truncatus
ENSPKIG00000024588	stau1	72	73.425	ENSUAMG00000025449	STAU1	99	73.425	Ursus_americanus
ENSPKIG00000024588	stau1	54	71.579	ENSUMAG00000024475	STAU1	89	71.579	Ursus_maritimus
ENSPKIG00000024588	stau1	93	72.171	ENSVPAG00000001313	STAU1	91	72.523	Vicugna_pacos
ENSPKIG00000024588	stau1	93	72.519	ENSVVUG00000022325	STAU1	96	72.519	Vulpes_vulpes
ENSPKIG00000024588	stau1	99	71.795	ENSXETG00000001783	stau1	99	71.795	Xenopus_tropicalis
ENSPKIG00000024588	stau1	53	80.000	ENSXCOG00000008804	stau1	98	77.720	Xiphophorus_couchianus
ENSPKIG00000024588	stau1	99	78.045	ENSXMAG00000016175	stau1	99	77.195	Xiphophorus_maculatus