EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000024718 (Gene tree)
Gene ID: 111834556
Gene Symbol: ovol1a
Alias: -
Full Name: ovo like transcriptional repressor 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 9802 bases
Position: chrPGUA01000115.1:1003778-1013579
Accession: 111834556
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000009717	zf-C2H2	PF00096.26	9.3e-18	1	3
ENSPKIP00000009717	zf-C2H2	PF00096.26	9.3e-18	2	3
ENSPKIP00000009717	zf-C2H2	PF00096.26	9.3e-18	3	3
ENSPKIP00000009713	zf-C2H2	PF00096.26	2.7e-17	1	3
ENSPKIP00000009713	zf-C2H2	PF00096.26	2.7e-17	2	3
ENSPKIP00000009713	zf-C2H2	PF00096.26	2.7e-17	3	3
ENSPKIP00000009717	zf-met	PF12874.7	0.00018	1	1
ENSPKIP00000009713	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000033825	-	894	-	ENSPKIP00000009713	297 (aa)	XP_023649756	UPI000CD5CAB7
ENSPKIT00000033829	-	4132	-	ENSPKIP00000009717	249 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000024718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000024718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000024718	ovol1a	61	38.158	ENSPKIG00000006563	-	84	38.158
ENSPKIG00000024718	ovol1a	55	34.286	ENSPKIG00000017781	-	64	39.560
ENSPKIG00000024718	ovol1a	68	39.583	ENSPKIG00000018168	znf236	51	39.583
ENSPKIG00000024718	ovol1a	73	40.000	ENSPKIG00000015951	-	80	40.000
ENSPKIG00000024718	ovol1a	66	41.250	ENSPKIG00000010773	-	90	42.105
ENSPKIG00000024718	ovol1a	85	41.558	ENSPKIG00000012069	-	96	41.558
ENSPKIG00000024718	ovol1a	64	35.294	ENSPKIG00000019848	-	50	35.294
ENSPKIG00000024718	ovol1a	59	32.407	ENSPKIG00000014203	ZIC2	57	34.118
ENSPKIG00000024718	ovol1a	57	44.000	ENSPKIG00000012290	-	68	41.333
ENSPKIG00000024718	ovol1a	72	33.333	ENSPKIG00000008355	-	73	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000024718	ovol1a	87	50.562	ENSAMXG00000041879	ovol1b	91	50.562	Astyanax_mexicanus
ENSPKIG00000024718	ovol1a	99	59.878	ENSAMXG00000011046	ovol1a	94	61.039	Astyanax_mexicanus
ENSPKIG00000024718	ovol1a	95	55.405	ENSDARG00000078256	ovol1b	98	56.140	Danio_rerio
ENSPKIG00000024718	ovol1a	99	60.121	ENSDARG00000076472	ovol1a	91	63.051	Danio_rerio
ENSPKIG00000024718	ovol1a	99	57.759	ENSELUG00000000343	ovol1a	99	58.046	Esox_lucius
ENSPKIG00000024718	ovol1a	86	57.792	ENSFHEG00000002773	-	93	56.656	Fundulus_heteroclitus
ENSPKIG00000024718	ovol1a	100	52.862	ENSGACG00000018794	ovol1a	100	53.872	Gasterosteus_aculeatus
ENSPKIG00000024718	ovol1a	100	57.895	ENSHCOG00000015860	ovol1a	100	56.725	Hippocampus_comes
ENSPKIG00000024718	ovol1a	85	59.468	ENSKMAG00000002605	-	100	57.637	Kryptolebias_marmoratus
ENSPKIG00000024718	ovol1a	100	55.747	ENSMAMG00000009768	ovol1a	100	55.747	Mastacembelus_armatus
ENSPKIG00000024718	ovol1a	100	57.143	ENSMALG00000008421	ovol1a	100	56.571	Monopterus_albus
ENSPKIG00000024718	ovol1a	100	54.366	ENSPFOG00000008841	-	100	54.153	Poecilia_formosa
ENSPKIG00000024718	ovol1a	100	61.162	ENSPNAG00000020630	ovol1a	100	61.162	Pygocentrus_nattereri
ENSPKIG00000024718	ovol1a	85	53.516	ENSPNAG00000016198	ovol1b	94	53.516	Pygocentrus_nattereri
ENSPKIG00000024718	ovol1a	85	59.283	ENSSDUG00000009846	ovol1a	100	55.618	Seriola_dumerili
ENSPKIG00000024718	ovol1a	60	56.923	ENSXCOG00000006461	-	78	56.923	Xiphophorus_couchianus