EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000024719 (Gene tree)
Gene ID: 111835771
Gene Symbol: chd1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 15880 bases
Position: chrPGUA01000532.1:55404-71283
Accession: ZDB-GENE-030131-7120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000009741	ResIII	PF04851.15	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000033853	-	4755	-	ENSPKIP00000009741	1584 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000024719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000024719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000024719	chd1	90	55.641	ENSPKIG00000000495	chd2	92	54.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000024719	chd1	92	79.134	ENSG00000153922	CHD1	94	83.019	Homo_sapiens
ENSPKIG00000024719	chd1	64	89.205	ENSAPOG00000005764	chd1	86	88.813	Acanthochromis_polyacanthus
ENSPKIG00000024719	chd1	92	75.851	ENSAOCG00000023105	chd1	94	77.261	Amphiprion_ocellaris
ENSPKIG00000024719	chd1	92	77.109	ENSAPEG00000013544	chd1	94	78.389	Amphiprion_percula
ENSPKIG00000024719	chd1	92	78.655	ENSATEG00000010676	chd1	90	77.792	Anabas_testudineus
ENSPKIG00000024719	chd1	73	81.074	ENSAMXG00000010843	chd1	93	81.240	Astyanax_mexicanus
ENSPKIG00000024719	chd1	94	79.041	ENSCATG00000032035	CHD1	91	78.384	Cercocebus_atys
ENSPKIG00000024719	chd1	94	78.975	ENSCSAG00000015339	CHD1	90	78.384	Chlorocebus_sabaeus
ENSPKIG00000024719	chd1	52	72.241	ENSCPBG00000015831	CHD1	86	72.645	Chrysemys_picta_bellii
ENSPKIG00000024719	chd1	94	76.706	ENSCANG00000036916	CHD1	91	76.084	Colobus_angolensis_palliatus
ENSPKIG00000024719	chd1	92	78.398	ENSCGRG00001023943	Chd1	89	78.107	Cricetulus_griseus_chok1gshd
ENSPKIG00000024719	chd1	92	78.398	ENSCGRG00000008652	Chd1	89	78.107	Cricetulus_griseus_crigri
ENSPKIG00000024719	chd1	92	74.402	ENSCSEG00000009553	chd1	95	73.806	Cynoglossus_semilaevis
ENSPKIG00000024719	chd1	92	73.492	ENSEASG00005016110	CHD1	87	78.909	Equus_asinus_asinus
ENSPKIG00000024719	chd1	92	79.560	ENSELUG00000017677	chd1	93	78.079	Esox_lucius
ENSPKIG00000024719	chd1	74	86.978	ENSFHEG00000021164	chd1	85	86.640	Fundulus_heteroclitus
ENSPKIG00000024719	chd1	92	82.152	ENSGMOG00000001537	chd1	89	78.090	Gadus_morhua
ENSPKIG00000024719	chd1	92	77.697	ENSGALG00000031327	-	93	75.526	Gallus_gallus
ENSPKIG00000024719	chd1	83	80.226	ENSGAFG00000019880	chd1	85	84.855	Gambusia_affinis
ENSPKIG00000024719	chd1	92	75.197	ENSGGOG00000011463	CHD1	89	74.885	Gorilla_gorilla
ENSPKIG00000024719	chd1	92	78.010	ENSHCOG00000014222	chd1	94	77.104	Hippocampus_comes
ENSPKIG00000024719	chd1	92	80.996	ENSIPUG00000001369	chd1	95	80.432	Ictalurus_punctatus
ENSPKIG00000024719	chd1	52	74.689	ENSLAFG00000023183	CHD1	82	74.689	Loxodonta_africana
ENSPKIG00000024719	chd1	94	78.975	ENSMFAG00000031226	CHD1	91	78.318	Macaca_fascicularis
ENSPKIG00000024719	chd1	75	79.381	ENSMMUG00000014090	CHD1	88	77.859	Macaca_mulatta
ENSPKIG00000024719	chd1	94	78.975	ENSMNEG00000045073	CHD1	91	78.318	Macaca_nemestrina
ENSPKIG00000024719	chd1	92	79.651	ENSMLEG00000041096	CHD1	96	70.803	Mandrillus_leucophaeus
ENSPKIG00000024719	chd1	73	80.522	ENSMZEG00005010957	chd1	92	81.092	Maylandia_zebra
ENSPKIG00000024719	chd1	92	76.347	ENSMOCG00000019121	Chd1	91	75.362	Microtus_ochrogaster
ENSPKIG00000024719	chd1	76	79.204	ENSMALG00000013317	chd1	89	79.919	Monopterus_albus
ENSPKIG00000024719	chd1	94	78.398	MGP_CAROLIEiJ_G0021099	Chd1	91	78.041	Mus_caroli
ENSPKIG00000024719	chd1	94	78.464	ENSMUSG00000023852	Chd1	91	78.107	Mus_musculus
ENSPKIG00000024719	chd1	94	77.924	MGP_PahariEiJ_G0023414	Chd1	96	73.982	Mus_pahari
ENSPKIG00000024719	chd1	93	75.969	ENSNBRG00000006860	chd1	94	75.242	Neolamprologus_brichardi
ENSPKIG00000024719	chd1	92	76.823	ENSNLEG00000014493	CHD1	89	76.402	Nomascus_leucogenys
ENSPKIG00000024719	chd1	97	79.295	ENSOANG00000004891	CHD1	100	84.072	Ornithorhynchus_anatinus
ENSPKIG00000024719	chd1	55	87.040	ENSORLG00015016725	chd1	86	78.378	Oryzias_latipes_hsok
ENSPKIG00000024719	chd1	92	77.792	ENSPPAG00000043367	CHD1	90	76.963	Pan_paniscus
ENSPKIG00000024719	chd1	92	78.937	ENSPTRG00000017103	CHD1	89	78.172	Pan_troglodytes
ENSPKIG00000024719	chd1	94	78.975	ENSPANG00000006387	CHD1	91	78.318	Papio_anubis
ENSPKIG00000024719	chd1	72	81.004	ENSPMGG00000005785	chd1	92	79.691	Periophthalmus_magnuspinnatus
ENSPKIG00000024719	chd1	94	78.398	ENSPEMG00000015939	Chd1	90	78.041	Peromyscus_maniculatus_bairdii
ENSPKIG00000024719	chd1	95	82.113	ENSPREG00000004209	chd1	95	81.118	Poecilia_reticulata
ENSPKIG00000024719	chd1	75	78.711	ENSRNOG00000014434	Chd1	88	79.003	Rattus_norvegicus
ENSPKIG00000024719	chd1	94	77.449	ENSRBIG00000044325	CHD1	91	75.911	Rhinopithecus_bieti
ENSPKIG00000024719	chd1	94	79.093	ENSRROG00000001726	CHD1	91	79.027	Rhinopithecus_roxellana
ENSPKIG00000024719	chd1	79	80.992	ENSSFOG00015007161	chd1	94	82.061	Scleropages_formosus
ENSPKIG00000024719	chd1	76	80.700	ENSSDUG00000018314	chd1	94	75.944	Seriola_dumerili
ENSPKIG00000024719	chd1	52	78.068	ENSSLDG00000017244	chd1	88	79.682	Seriola_lalandi_dorsalis
ENSPKIG00000024719	chd1	73	81.286	ENSSPAG00000007024	chd1	87	81.204	Stegastes_partitus
ENSPKIG00000024719	chd1	77	80.374	ENSSSCG00000014177	CHD1	87	80.530	Sus_scrofa
ENSPKIG00000024719	chd1	95	82.609	ENSTRUG00000010282	chd1	92	83.673	Takifugu_rubripes
ENSPKIG00000024719	chd1	68	86.364	ENSTNIG00000007101	chd1	85	82.676	Tetraodon_nigroviridis
ENSPKIG00000024719	chd1	98	78.756	ENSXCOG00000017184	chd1	94	78.056	Xiphophorus_couchianus
ENSPKIG00000024719	chd1	74	88.627	ENSXMAG00000014538	chd1	89	90.870	Xiphophorus_maculatus