EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000024852 (Gene tree)
Gene ID: 111860545
Gene Symbol: htatsf1
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7890 bases
Position: chrPGUA01000401.1:232887-240776
Accession: 111860545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000009968	RRM_1	PF00076.22	6.5e-15	1	2
ENSPKIP00000009968	RRM_1	PF00076.22	6.5e-15	2	2
ENSPKIP00000009961	RRM_1	PF00076.22	8.2e-15	1	2
ENSPKIP00000009961	RRM_1	PF00076.22	8.2e-15	2	2
ENSPKIP00000009958	RRM_1	PF00076.22	8.9e-15	1	2
ENSPKIP00000009958	RRM_1	PF00076.22	8.9e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000034072	-	2323	-	ENSPKIP00000009958	485 (aa)	-	-
ENSPKIT00000034082	-	1326	-	ENSPKIP00000009968	441 (aa)	-	-
ENSPKIT00000034075	-	1864	-	ENSPKIP00000009961	474 (aa)	XP_023700115	UPI000CD6229B

Gene Model

Click here to download ENSPKIG00000024852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000024852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000024852	htatsf1	79	66.480	ENSG00000102241	HTATSF1	100	62.667	Homo_sapiens
ENSPKIG00000024852	htatsf1	99	67.478	ENSAPOG00000009823	htatsf1	99	67.920	Acanthochromis_polyacanthus
ENSPKIG00000024852	htatsf1	99	67.396	ENSACIG00000020459	htatsf1	99	68.341	Amphilophus_citrinellus
ENSPKIG00000024852	htatsf1	99	67.028	ENSAOCG00000020994	htatsf1	99	67.462	Amphiprion_ocellaris
ENSPKIG00000024852	htatsf1	99	67.467	ENSAPEG00000016432	htatsf1	99	67.467	Amphiprion_percula
ENSPKIG00000024852	htatsf1	93	68.941	ENSATEG00000008903	htatsf1	95	68.941	Anabas_testudineus
ENSPKIG00000024852	htatsf1	91	63.017	ENSAPLG00000012401	HTATSF1	99	63.017	Anas_platyrhynchos
ENSPKIG00000024852	htatsf1	82	64.785	ENSACAG00000009346	HTATSF1	99	63.291	Anolis_carolinensis
ENSPKIG00000024852	htatsf1	100	66.809	ENSACLG00000008096	htatsf1	99	67.811	Astatotilapia_calliptera
ENSPKIG00000024852	htatsf1	99	66.809	ENSAMXG00000008387	htatsf1	99	67.447	Astyanax_mexicanus
ENSPKIG00000024852	htatsf1	83	64.267	ENSBTAG00000032711	HTATSF1	50	64.267	Bos_taurus
ENSPKIG00000024852	htatsf1	75	38.757	WBGene00022025	Y65B4A.1	78	37.778	Caenorhabditis_elegans
ENSPKIG00000024852	htatsf1	83	67.819	ENSCAFG00000023294	HTATSF1	50	67.819	Canis_familiaris
ENSPKIG00000024852	htatsf1	93	61.483	ENSCHIG00000000312	HTATSF1	54	61.962	Capra_hircus
ENSPKIG00000024852	htatsf1	78	64.225	ENSCCAG00000025329	-	55	64.879	Cebus_capucinus
ENSPKIG00000024852	htatsf1	79	66.017	ENSCCAG00000022701	-	50	66.931	Cebus_capucinus
ENSPKIG00000024852	htatsf1	99	61.659	ENSCPBG00000026092	HTATSF1	98	61.659	Chrysemys_picta_bellii
ENSPKIG00000024852	htatsf1	89	48.806	ENSCING00000005914	-	97	42.915	Ciona_intestinalis
ENSPKIG00000024852	htatsf1	88	45.730	ENSCSAVG00000000371	-	98	40.773	Ciona_savignyi
ENSPKIG00000024852	htatsf1	100	65.293	ENSCVAG00000014070	htatsf1	98	66.958	Cyprinodon_variegatus
ENSPKIG00000024852	htatsf1	99	65.934	ENSDARG00000056649	htatsf1	99	65.142	Danio_rerio
ENSPKIG00000024852	htatsf1	85	40.099	FBgn0037081	barc	68	42.377	Drosophila_melanogaster
ENSPKIG00000024852	htatsf1	85	55.611	ENSEBUG00000001534	htatsf1	81	55.611	Eptatretus_burgeri
ENSPKIG00000024852	htatsf1	100	65.784	ENSELUG00000005486	htatsf1	90	68.352	Esox_lucius
ENSPKIG00000024852	htatsf1	83	67.287	ENSFCAG00000031924	HTATSF1	50	67.287	Felis_catus
ENSPKIG00000024852	htatsf1	83	67.801	ENSFALG00000003728	HTATSF1	99	61.099	Ficedula_albicollis
ENSPKIG00000024852	htatsf1	100	67.174	ENSFHEG00000020286	htatsf1	99	67.538	Fundulus_heteroclitus
ENSPKIG00000024852	htatsf1	79	72.346	ENSGMOG00000016444	htatsf1	100	72.346	Gadus_morhua
ENSPKIG00000024852	htatsf1	99	61.111	ENSGALG00000006410	HTATSF1	99	61.111	Gallus_gallus
ENSPKIG00000024852	htatsf1	99	67.325	ENSGAFG00000003041	htatsf1	98	67.325	Gambusia_affinis
ENSPKIG00000024852	htatsf1	99	67.184	ENSGACG00000020459	htatsf1	99	67.184	Gasterosteus_aculeatus
ENSPKIG00000024852	htatsf1	99	67.171	ENSHBUG00000004392	htatsf1	99	68.043	Haplochromis_burtoni
ENSPKIG00000024852	htatsf1	93	61.667	ENSHGLG00000005328	HTATSF1	54	61.667	Heterocephalus_glaber_female
ENSPKIG00000024852	htatsf1	84	72.208	ENSHCOG00000009056	htatsf1	99	66.004	Hippocampus_comes
ENSPKIG00000024852	htatsf1	99	65.510	ENSIPUG00000017828	htatsf1	99	66.522	Ictalurus_punctatus
ENSPKIG00000024852	htatsf1	79	66.574	ENSSTOG00000012505	HTATSF1	51	67.109	Ictidomys_tridecemlineatus
ENSPKIG00000024852	htatsf1	99	67.686	ENSKMAG00000007622	htatsf1	99	67.686	Kryptolebias_marmoratus
ENSPKIG00000024852	htatsf1	99	66.372	ENSLBEG00000001154	htatsf1	99	66.372	Labrus_bergylta
ENSPKIG00000024852	htatsf1	99	60.403	ENSLACG00000015989	HTATSF1	99	60.403	Latimeria_chalumnae
ENSPKIG00000024852	htatsf1	99	49.237	ENSLOCG00000015118	htatsf1	99	49.138	Lepisosteus_oculatus
ENSPKIG00000024852	htatsf1	83	68.783	ENSLAFG00000014307	HTATSF1	55	68.519	Loxodonta_africana
ENSPKIG00000024852	htatsf1	79	66.298	ENSMNEG00000024084	HTATSF1	55	66.842	Macaca_nemestrina
ENSPKIG00000024852	htatsf1	90	70.531	ENSMAMG00000021225	htatsf1	99	66.886	Mastacembelus_armatus
ENSPKIG00000024852	htatsf1	99	66.951	ENSMZEG00005000485	htatsf1	99	67.811	Maylandia_zebra
ENSPKIG00000024852	htatsf1	93	62.053	ENSMGAG00000003558	HTATSF1	97	62.053	Meleagris_gallopavo
ENSPKIG00000024852	htatsf1	79	65.746	ENSMAUG00000007235	Htatsf1	50	66.316	Mesocricetus_auratus
ENSPKIG00000024852	htatsf1	79	64.804	ENSMICG00000009348	HTATSF1	50	65.426	Microcebus_murinus
ENSPKIG00000024852	htatsf1	91	61.758	ENSMOCG00000022370	-	55	61.758	Microtus_ochrogaster
ENSPKIG00000024852	htatsf1	79	67.039	ENSMOCG00000023007	-	50	67.553	Microtus_ochrogaster
ENSPKIG00000024852	htatsf1	100	66.304	ENSMMOG00000011013	htatsf1	99	66.449	Mola_mola
ENSPKIG00000024852	htatsf1	100	61.607	ENSMODG00000014087	-	98	61.607	Monodelphis_domestica
ENSPKIG00000024852	htatsf1	54	63.636	ENSMODG00000000199	-	96	63.415	Monodelphis_domestica
ENSPKIG00000024852	htatsf1	99	63.158	ENSMALG00000019977	htatsf1	99	63.158	Monopterus_albus
ENSPKIG00000024852	htatsf1	79	66.852	MGP_CAROLIEiJ_G0033094	Htatsf1	50	67.374	Mus_caroli
ENSPKIG00000024852	htatsf1	83	65.323	ENSMLUG00000009234	-	51	65.147	Myotis_lucifugus
ENSPKIG00000024852	htatsf1	79	65.642	ENSNGAG00000017831	Htatsf1	51	66.223	Nannospalax_galili
ENSPKIG00000024852	htatsf1	99	67.164	ENSNBRG00000003818	htatsf1	99	68.026	Neolamprologus_brichardi
ENSPKIG00000024852	htatsf1	91	64.806	ENSMEUG00000004133	-	98	64.806	Notamacropus_eugenii
ENSPKIG00000024852	htatsf1	99	67.164	ENSONIG00000008638	htatsf1	99	68.026	Oreochromis_niloticus
ENSPKIG00000024852	htatsf1	91	61.962	ENSOANG00000011674	-	98	61.962	Ornithorhynchus_anatinus
ENSPKIG00000024852	htatsf1	99	65.359	ENSORLG00000002356	htatsf1	99	65.359	Oryzias_latipes
ENSPKIG00000024852	htatsf1	99	65.076	ENSORLG00020017818	htatsf1	96	65.076	Oryzias_latipes_hni
ENSPKIG00000024852	htatsf1	99	64.924	ENSORLG00015002268	htatsf1	99	64.924	Oryzias_latipes_hsok
ENSPKIG00000024852	htatsf1	99	64.847	ENSOMEG00000007564	htatsf1	99	64.847	Oryzias_melastigma
ENSPKIG00000024852	htatsf1	83	67.287	ENSPPRG00000014209	HTATSF1	50	67.287	Panthera_pardus
ENSPKIG00000024852	htatsf1	64	74.205	ENSPSIG00000010192	HTATSF1	99	63.305	Pelodiscus_sinensis
ENSPKIG00000024852	htatsf1	99	62.851	ENSPMGG00000006172	htatsf1	99	63.715	Periophthalmus_magnuspinnatus
ENSPKIG00000024852	htatsf1	84	63.947	ENSPCIG00000018896	-	86	63.947	Phascolarctos_cinereus
ENSPKIG00000024852	htatsf1	92	63.679	ENSPCIG00000030173	-	96	64.286	Phascolarctos_cinereus
ENSPKIG00000024852	htatsf1	100	68.053	ENSPFOG00000007871	htatsf1	97	68.202	Poecilia_formosa
ENSPKIG00000024852	htatsf1	100	67.834	ENSPLAG00000007532	htatsf1	99	67.982	Poecilia_latipinna
ENSPKIG00000024852	htatsf1	99	67.982	ENSPMEG00000000352	htatsf1	99	67.982	Poecilia_mexicana
ENSPKIG00000024852	htatsf1	100	68.341	ENSPREG00000007811	htatsf1	99	68.490	Poecilia_reticulata
ENSPKIG00000024852	htatsf1	83	62.366	ENSPCAG00000010576	HTATSF1	52	62.366	Procavia_capensis
ENSPKIG00000024852	htatsf1	79	65.460	ENSPCOG00000021823	HTATSF1	50	66.048	Propithecus_coquereli
ENSPKIG00000024852	htatsf1	83	68.000	ENSPVAG00000010281	HTATSF1	54	68.000	Pteropus_vampyrus
ENSPKIG00000024852	htatsf1	99	66.951	ENSPNYG00000016693	htatsf1	99	67.811	Pundamilia_nyererei
ENSPKIG00000024852	htatsf1	99	70.295	ENSPNAG00000006166	htatsf1	99	70.295	Pygocentrus_nattereri
ENSPKIG00000024852	htatsf1	79	65.922	ENSSBOG00000027186	-	50	66.489	Saimiri_boliviensis_boliviensis
ENSPKIG00000024852	htatsf1	83	66.310	ENSSHAG00000006440	-	97	66.310	Sarcophilus_harrisii
ENSPKIG00000024852	htatsf1	98	62.416	ENSSHAG00000018908	-	97	62.416	Sarcophilus_harrisii
ENSPKIG00000024852	htatsf1	100	67.965	ENSSFOG00015012002	htatsf1	100	67.965	Scleropages_formosus
ENSPKIG00000024852	htatsf1	99	67.329	ENSSMAG00000002970	htatsf1	99	67.329	Scophthalmus_maximus
ENSPKIG00000024852	htatsf1	99	62.500	ENSSDUG00000020002	htatsf1	99	62.939	Seriola_dumerili
ENSPKIG00000024852	htatsf1	99	65.443	ENSSLDG00000016880	htatsf1	99	66.164	Seriola_lalandi_dorsalis
ENSPKIG00000024852	htatsf1	90	60.298	ENSSARG00000005193	HTATSF1	54	60.298	Sorex_araneus
ENSPKIG00000024852	htatsf1	99	62.555	ENSSPUG00000014767	HTATSF1	99	62.555	Sphenodon_punctatus
ENSPKIG00000024852	htatsf1	99	67.834	ENSSPAG00000000732	htatsf1	99	67.834	Stegastes_partitus
ENSPKIG00000024852	htatsf1	79	66.852	ENSSSCG00000023062	HTATSF1	60	62.619	Sus_scrofa
ENSPKIG00000024852	htatsf1	99	60.659	ENSTGUG00000002099	HTATSF1	99	60.659	Taeniopygia_guttata
ENSPKIG00000024852	htatsf1	99	65.132	ENSTRUG00000013383	htatsf1	99	65.351	Takifugu_rubripes
ENSPKIG00000024852	htatsf1	99	65.351	ENSTNIG00000016140	htatsf1	99	65.351	Tetraodon_nigroviridis
ENSPKIG00000024852	htatsf1	76	65.497	ENSTTRG00000002269	HTATSF1	58	65.497	Tursiops_truncatus
ENSPKIG00000024852	htatsf1	83	67.553	ENSUAMG00000012048	HTATSF1	50	67.553	Ursus_americanus
ENSPKIG00000024852	htatsf1	85	64.615	ENSXETG00000019749	htatsf1	74	64.615	Xenopus_tropicalis
ENSPKIG00000024852	htatsf1	95	69.811	ENSXCOG00000006912	htatsf1	98	69.811	Xiphophorus_couchianus
ENSPKIG00000024852	htatsf1	100	68.527	ENSXMAG00000000490	htatsf1	100	68.527	Xiphophorus_maculatus