EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000024910 (Gene tree)
Gene ID: 111860549
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein X-linked
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 4083 bases
Position: chrPGUA01000401.1:336599-340681
Accession: 111860549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000010050	RBM1CTR	PF08081.11	1.5e-18	1	1
ENSPKIP00000010053	RBM1CTR	PF08081.11	1.5e-18	1	1
ENSPKIP00000010050	RRM_1	PF00076.22	1.1e-24	1	1
ENSPKIP00000010053	RRM_1	PF00076.22	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000034170	-	1470	-	ENSPKIP00000010053	381 (aa)	XP_023700123	UPI000CD65FAF
ENSPKIT00000034166	-	2277	-	ENSPKIP00000010050	381 (aa)	XP_023700123	UPI000CD65FAF

Gene Model

Click here to download ENSPKIG00000024910's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000024910's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000024910	-	100	71.465	ENSPKIG00000017611	rbmx	100	72.917

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000024910	-	94	83.514	ENSAPOG00000006496	rbmx	100	82.487	Acanthochromis_polyacanthus
ENSPKIG00000024910	-	91	72.022	ENSACIG00000011598	rbmx	91	80.663	Amphilophus_citrinellus
ENSPKIG00000024910	-	93	80.899	ENSACIG00000011576	rbmx	100	82.902	Amphilophus_citrinellus
ENSPKIG00000024910	-	93	79.620	ENSAOCG00000020930	rbmx	100	82.532	Amphiprion_ocellaris
ENSPKIG00000024910	-	100	78.734	ENSAPEG00000007316	rbmx	100	81.772	Amphiprion_percula
ENSPKIG00000024910	-	93	82.022	ENSATEG00000017363	rbmx	100	83.679	Anabas_testudineus
ENSPKIG00000024910	-	100	79.188	ENSACLG00000000098	rbmx	100	82.741	Astatotilapia_calliptera
ENSPKIG00000024910	-	92	86.592	ENSAMXG00000019990	rbmx	100	85.530	Astyanax_mexicanus
ENSPKIG00000024910	-	93	80.163	ENSCSEG00000005240	rbmx	100	83.038	Cynoglossus_semilaevis
ENSPKIG00000024910	-	93	82.514	ENSCVAG00000008876	rbmx	100	80.153	Cyprinodon_variegatus
ENSPKIG00000024910	-	92	83.853	ENSDARG00000014244	rbmx	100	85.345	Danio_rerio
ENSPKIG00000024910	-	94	54.987	ENSEBUG00000006778	rbmx	99	53.929	Eptatretus_burgeri
ENSPKIG00000024910	-	94	80.593	ENSELUG00000003600	rbmx	100	82.562	Esox_lucius
ENSPKIG00000024910	-	93	81.967	ENSFHEG00000016764	rbmx	100	79.644	Fundulus_heteroclitus
ENSPKIG00000024910	-	100	77.556	ENSGMOG00000004496	rbmx	100	76.309	Gadus_morhua
ENSPKIG00000024910	-	93	82.740	ENSGAFG00000019917	rbmx	100	80.357	Gambusia_affinis
ENSPKIG00000024910	-	93	78.226	ENSGACG00000017237	rbmx	100	80.952	Gasterosteus_aculeatus
ENSPKIG00000024910	-	100	78.934	ENSHBUG00000015283	rbmx	100	82.487	Haplochromis_burtoni
ENSPKIG00000024910	-	93	77.507	ENSHCOG00000001111	rbmx	100	78.276	Hippocampus_comes
ENSPKIG00000024910	-	100	78.036	ENSIPUG00000022212	rbmx	100	77.778	Ictalurus_punctatus
ENSPKIG00000024910	-	93	83.562	ENSKMAG00000001754	rbmx	100	81.888	Kryptolebias_marmoratus
ENSPKIG00000024910	-	93	85.237	ENSLBEG00000010000	rbmx	100	83.679	Labrus_bergylta
ENSPKIG00000024910	-	93	70.081	ENSLACG00000015261	rbmx	100	71.106	Latimeria_chalumnae
ENSPKIG00000024910	-	100	85.037	ENSLOCG00000015142	rbmx	100	85.037	Lepisosteus_oculatus
ENSPKIG00000024910	-	93	80.541	ENSMAMG00000020591	rbmx	100	83.797	Mastacembelus_armatus
ENSPKIG00000024910	-	90	79.718	ENSMZEG00005006432	rbmx	87	83.944	Maylandia_zebra
ENSPKIG00000024910	-	93	83.060	ENSMMOG00000001043	rbmx	100	81.679	Mola_mola
ENSPKIG00000024910	-	93	73.913	ENSMALG00000009777	rbmx	100	77.215	Monopterus_albus
ENSPKIG00000024910	-	100	79.442	ENSNBRG00000022154	rbmx	100	82.995	Neolamprologus_brichardi
ENSPKIG00000024910	-	100	78.987	ENSONIG00000002700	rbmx	100	82.532	Oreochromis_niloticus
ENSPKIG00000024910	-	100	83.249	ENSORLG00000001692	rbmx	100	82.741	Oryzias_latipes
ENSPKIG00000024910	-	100	82.741	ENSORLG00020021132	rbmx	100	82.741	Oryzias_latipes_hni
ENSPKIG00000024910	-	100	81.980	ENSORLG00015000330	rbmx	100	81.980	Oryzias_latipes_hsok
ENSPKIG00000024910	-	100	78.934	ENSOMEG00000016787	rbmx	100	82.234	Oryzias_melastigma
ENSPKIG00000024910	-	91	79.539	ENSPMGG00000017906	rbmx	100	77.546	Periophthalmus_magnuspinnatus
ENSPKIG00000024910	-	93	82.740	ENSPFOG00000013193	rbmx	100	79.847	Poecilia_formosa
ENSPKIG00000024910	-	93	82.740	ENSPLAG00000010472	rbmx	100	80.102	Poecilia_latipinna
ENSPKIG00000024910	-	93	82.740	ENSPMEG00000007579	rbmx	100	79.847	Poecilia_mexicana
ENSPKIG00000024910	-	93	82.466	ENSPREG00000010279	rbmx	100	79.847	Poecilia_reticulata
ENSPKIG00000024910	-	100	78.934	ENSPNYG00000012536	rbmx	100	82.487	Pundamilia_nyererei
ENSPKIG00000024910	-	92	86.592	ENSPNAG00000019648	rbmx	100	85.788	Pygocentrus_nattereri
ENSPKIG00000024910	-	100	84.536	ENSSFOG00015011749	-	100	82.990	Scleropages_formosus
ENSPKIG00000024910	-	100	85.117	ENSSFOG00015008229	rbmx	100	87.500	Scleropages_formosus
ENSPKIG00000024910	-	93	80.874	ENSSMAG00000014636	rbmx	100	81.425	Scophthalmus_maximus
ENSPKIG00000024910	-	93	79.891	ENSSDUG00000000242	rbmx	100	82.785	Seriola_dumerili
ENSPKIG00000024910	-	93	79.891	ENSSLDG00000021381	rbmx	100	82.785	Seriola_lalandi_dorsalis
ENSPKIG00000024910	-	94	79.301	ENSSPAG00000008582	rbmx	100	82.278	Stegastes_partitus
ENSPKIG00000024910	-	94	81.351	ENSTRUG00000006031	rbmx	100	81.425	Takifugu_rubripes
ENSPKIG00000024910	-	93	80.110	ENSTNIG00000016844	rbmx	100	81.606	Tetraodon_nigroviridis
ENSPKIG00000024910	-	66	58.846	ENSUAMG00000011752	-	85	56.223	Ursus_americanus
ENSPKIG00000024910	-	66	58.846	ENSUMAG00000019276	-	85	56.223	Ursus_maritimus
ENSPKIG00000024910	-	93	55.041	ENSXETG00000003481	rbmx	100	55.330	Xenopus_tropicalis
ENSPKIG00000024910	-	91	76.404	ENSXCOG00000016084	rbmx	99	74.413	Xiphophorus_couchianus
ENSPKIG00000024910	-	93	82.466	ENSXMAG00000013407	rbmx	100	80.102	Xiphophorus_maculatus