EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000025162 (Gene tree)
Gene ID: 111841825
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 34888 bases
Position: chrPGUA01000089.1:1204214-1239101
Accession: 111841825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000010441	SEN1_N	PF12726.7	1.3e-15	1	1
ENSPKIP00000010451	SEN1_N	PF12726.7	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000034584	SETX-202	7785	-	ENSPKIP00000010451	2384 (aa)	XP_023663656	UPI000CD65D79
ENSPKIT00000034573	SETX-201	7155	-	ENSPKIP00000010441	2384 (aa)	XP_023663656	UPI000CD65D79

Gene Model

Click here to download ENSPKIG00000025162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025162	SETX	84	49.587	ENSG00000107290	SETX	75	49.256	Homo_sapiens
ENSPKIG00000025162	SETX	94	49.603	ENSAMXG00000014406	-	99	40.736	Astyanax_mexicanus
ENSPKIG00000025162	SETX	79	50.247	ENSCJAG00000018245	SETX	68	50.248	Callithrix_jacchus
ENSPKIG00000025162	SETX	83	47.833	ENSCPOG00000001492	SETX	77	47.833	Cavia_porcellus
ENSPKIG00000025162	SETX	77	48.928	ENSCLAG00000012582	SETX	76	48.928	Chinchilla_lanigera
ENSPKIG00000025162	SETX	59	52.542	ENSETEG00000008111	-	54	52.542	Echinops_telfairi
ENSPKIG00000025162	SETX	79	49.172	ENSECAG00000012019	SETX	80	49.007	Equus_caballus
ENSPKIG00000025162	SETX	89	52.066	ENSELUG00000022536	-	90	50.309	Esox_lucius
ENSPKIG00000025162	SETX	80	49.583	ENSFCAG00000007102	SETX	80	49.249	Felis_catus
ENSPKIG00000025162	SETX	81	49.832	ENSFALG00000001464	SETX	83	49.832	Ficedula_albicollis
ENSPKIG00000025162	SETX	81	46.026	ENSGGOG00000027664	SETX	76	48.536	Gorilla_gorilla
ENSPKIG00000025162	SETX	96	40.850	ENSIPUG00000006685	setx	99	41.535	Ictalurus_punctatus
ENSPKIG00000025162	SETX	96	42.771	ENSLOCG00000004264	SETX	99	42.973	Lepisosteus_oculatus
ENSPKIG00000025162	SETX	51	38.173	ENSLAFG00000017327	-	95	38.371	Loxodonta_africana
ENSPKIG00000025162	SETX	73	48.980	ENSMOCG00000000848	Setx	71	48.794	Microtus_ochrogaster
ENSPKIG00000025162	SETX	77	50.334	MGP_PahariEiJ_G0024821	Setx	77	49.583	Mus_pahari
ENSPKIG00000025162	SETX	81	48.600	ENSNLEG00000012839	SETX	82	48.270	Nomascus_leucogenys
ENSPKIG00000025162	SETX	73	50.095	ENSOCUG00000005616	SETX	67	49.905	Oryctolagus_cuniculus
ENSPKIG00000025162	SETX	75	49.421	ENSOGAG00000013387	SETX	68	49.172	Otolemur_garnettii
ENSPKIG00000025162	SETX	84	49.917	ENSPPAG00000004108	SETX	77	49.587	Pan_paniscus
ENSPKIG00000025162	SETX	80	49.750	ENSPPRG00000012867	SETX	80	49.418	Panthera_pardus
ENSPKIG00000025162	SETX	80	49.750	ENSPTIG00000021101	SETX	77	49.418	Panthera_tigris_altaica
ENSPKIG00000025162	SETX	84	49.917	ENSPTRG00000021495	SETX	77	49.587	Pan_troglodytes
ENSPKIG00000025162	SETX	90	45.937	ENSSPUG00000016332	SETX	86	47.668	Sphenodon_punctatus
ENSPKIG00000025162	SETX	86	54.406	ENSSSCG00000005724	SETX	86	47.929	Sus_scrofa
ENSPKIG00000025162	SETX	82	49.832	ENSTGUG00000005117	SETX	83	49.832	Taeniopygia_guttata
ENSPKIG00000025162	SETX	81	48.510	ENSXETG00000006254	setx	100	40.585	Xenopus_tropicalis