EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000025176 (Gene tree)
Gene ID: 111853655
Gene Symbol: a1cf
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12242 bases
Position: chrPGUA01000027.1:378876-391117
Accession: 111853655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000010464	DND1_DSRM	PF14709.7	7.4e-24	1	1
ENSPKIP00000010464	RRM_1	PF00076.22	2.9e-41	1	3
ENSPKIP00000010464	RRM_1	PF00076.22	2.9e-41	2	3
ENSPKIP00000010464	RRM_1	PF00076.22	2.9e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000034597	-	1920	XM_023830805	ENSPKIP00000010464	597 (aa)	XP_023686573	UPI000CD647E7

Gene Model

Click here to download ENSPKIG00000025176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000025176	a1cf	91	65.472	ENSPKIG00000015334	rbm46	79	65.472
ENSPKIG00000025176	a1cf	50	54.045	ENSPKIG00000000757	HNRNPR	50	54.045
ENSPKIG00000025176	a1cf	71	58.986	ENSPKIG00000013431	RBM47	71	61.692
ENSPKIG00000025176	a1cf	90	51.920	ENSPKIG00000005037	rbm47	78	52.642
ENSPKIG00000025176	a1cf	60	31.081	ENSPKIG00000007322	pabpc1l	71	31.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025176	a1cf	100	80.333	ENSG00000148584	A1CF	100	87.065	Homo_sapiens
ENSPKIG00000025176	a1cf	100	77.980	ENSAPOG00000008259	a1cf	100	78.170	Acanthochromis_polyacanthus
ENSPKIG00000025176	a1cf	100	79.933	ENSAMEG00000000523	A1CF	100	80.268	Ailuropoda_melanoleuca
ENSPKIG00000025176	a1cf	100	79.935	ENSACIG00000008632	a1cf	100	80.424	Amphilophus_citrinellus
ENSPKIG00000025176	a1cf	100	79.310	ENSAOCG00000023744	a1cf	96	88.406	Amphiprion_ocellaris
ENSPKIG00000025176	a1cf	100	80.296	ENSAPEG00000009537	a1cf	100	81.609	Amphiprion_percula
ENSPKIG00000025176	a1cf	100	81.148	ENSATEG00000013720	a1cf	100	81.475	Anabas_testudineus
ENSPKIG00000025176	a1cf	100	81.407	ENSAPLG00000002964	A1CF	100	81.407	Anas_platyrhynchos
ENSPKIG00000025176	a1cf	100	78.224	ENSACAG00000015269	A1CF	100	78.224	Anolis_carolinensis
ENSPKIG00000025176	a1cf	100	79.000	ENSANAG00000019974	A1CF	100	79.000	Aotus_nancymaae
ENSPKIG00000025176	a1cf	100	78.454	ENSACLG00000017428	a1cf	100	79.276	Astatotilapia_calliptera
ENSPKIG00000025176	a1cf	100	81.353	ENSAMXG00000018180	a1cf	100	81.683	Astyanax_mexicanus
ENSPKIG00000025176	a1cf	100	79.534	ENSBTAG00000021195	A1CF	100	79.700	Bos_taurus
ENSPKIG00000025176	a1cf	100	80.333	ENSCJAG00000005045	A1CF	100	80.333	Callithrix_jacchus
ENSPKIG00000025176	a1cf	100	80.402	ENSCAFG00000015581	A1CF	100	80.402	Canis_familiaris
ENSPKIG00000025176	a1cf	100	80.402	ENSCAFG00020026421	A1CF	98	85.235	Canis_lupus_dingo
ENSPKIG00000025176	a1cf	100	80.366	ENSCHIG00000020411	A1CF	100	80.532	Capra_hircus
ENSPKIG00000025176	a1cf	97	78.893	ENSTSYG00000001755	A1CF	100	79.469	Carlito_syrichta
ENSPKIG00000025176	a1cf	100	76.161	ENSCAPG00000017386	A1CF	100	76.161	Cavia_aperea
ENSPKIG00000025176	a1cf	100	79.833	ENSCPOG00000009807	A1CF	100	79.833	Cavia_porcellus
ENSPKIG00000025176	a1cf	100	80.634	ENSCCAG00000018168	A1CF	100	80.634	Cebus_capucinus
ENSPKIG00000025176	a1cf	100	79.097	ENSCATG00000043715	A1CF	100	79.264	Cercocebus_atys
ENSPKIG00000025176	a1cf	100	79.700	ENSCLAG00000010424	A1CF	100	79.700	Chinchilla_lanigera
ENSPKIG00000025176	a1cf	100	80.769	ENSCSAG00000007032	A1CF	100	80.936	Chlorocebus_sabaeus
ENSPKIG00000025176	a1cf	98	76.342	ENSCHOG00000009089	A1CF	98	76.510	Choloepus_hoffmanni
ENSPKIG00000025176	a1cf	100	80.570	ENSCPBG00000026464	A1CF	100	80.402	Chrysemys_picta_bellii
ENSPKIG00000025176	a1cf	100	80.602	ENSCANG00000038032	A1CF	100	80.769	Colobus_angolensis_palliatus
ENSPKIG00000025176	a1cf	100	79.534	ENSCGRG00001017413	A1cf	100	79.534	Cricetulus_griseus_chok1gshd
ENSPKIG00000025176	a1cf	100	79.035	ENSCGRG00000017332	A1cf	100	79.201	Cricetulus_griseus_crigri
ENSPKIG00000025176	a1cf	100	79.672	ENSCSEG00000002361	a1cf	100	80.363	Cynoglossus_semilaevis
ENSPKIG00000025176	a1cf	100	79.016	ENSCVAG00000010520	a1cf	100	80.000	Cyprinodon_variegatus
ENSPKIG00000025176	a1cf	100	86.622	ENSDARG00000002968	a1cf	100	87.291	Danio_rerio
ENSPKIG00000025176	a1cf	100	79.368	ENSDNOG00000002829	A1CF	100	79.368	Dasypus_novemcinctus
ENSPKIG00000025176	a1cf	80	86.667	ENSETEG00000012527	A1CF	80	86.667	Echinops_telfairi
ENSPKIG00000025176	a1cf	100	79.934	ENSEASG00005012924	A1CF	100	80.100	Equus_asinus_asinus
ENSPKIG00000025176	a1cf	100	79.602	ENSECAG00000010424	A1CF	100	79.768	Equus_caballus
ENSPKIG00000025176	a1cf	79	70.339	ENSEEUG00000000013	A1CF	100	70.339	Erinaceus_europaeus
ENSPKIG00000025176	a1cf	100	88.107	ENSELUG00000003159	a1cf	100	87.940	Esox_lucius
ENSPKIG00000025176	a1cf	100	78.428	ENSFCAG00000011179	A1CF	100	78.667	Felis_catus
ENSPKIG00000025176	a1cf	100	81.072	ENSFALG00000013183	A1CF	100	80.905	Ficedula_albicollis
ENSPKIG00000025176	a1cf	100	78.536	ENSFDAG00000019371	A1CF	100	78.536	Fukomys_damarensis
ENSPKIG00000025176	a1cf	100	73.770	ENSFHEG00000019652	a1cf	96	85.156	Fundulus_heteroclitus
ENSPKIG00000025176	a1cf	100	76.898	ENSGMOG00000018943	a1cf	100	77.100	Gadus_morhua
ENSPKIG00000025176	a1cf	95	81.625	ENSGALG00000003765	A1CF	97	81.449	Gallus_gallus
ENSPKIG00000025176	a1cf	100	74.262	ENSGAFG00000014868	a1cf	100	74.262	Gambusia_affinis
ENSPKIG00000025176	a1cf	100	79.276	ENSGACG00000010241	a1cf	100	79.934	Gasterosteus_aculeatus
ENSPKIG00000025176	a1cf	94	80.319	ENSGAGG00000016508	A1CF	97	80.142	Gopherus_agassizii
ENSPKIG00000025176	a1cf	100	80.333	ENSGGOG00000009670	A1CF	100	80.500	Gorilla_gorilla
ENSPKIG00000025176	a1cf	100	80.261	ENSHBUG00000021959	a1cf	100	80.750	Haplochromis_burtoni
ENSPKIG00000025176	a1cf	100	79.700	ENSHGLG00000008955	A1CF	100	80.033	Heterocephalus_glaber_female
ENSPKIG00000025176	a1cf	100	79.035	ENSHGLG00100000518	A1CF	100	79.368	Heterocephalus_glaber_male
ENSPKIG00000025176	a1cf	100	73.246	ENSHCOG00000017669	a1cf	100	75.530	Hippocampus_comes
ENSPKIG00000025176	a1cf	90	89.591	ENSIPUG00000010367	a1cf	96	89.739	Ictalurus_punctatus
ENSPKIG00000025176	a1cf	100	80.488	ENSKMAG00000006568	a1cf	100	81.463	Kryptolebias_marmoratus
ENSPKIG00000025176	a1cf	99	81.669	ENSLBEG00000020994	a1cf	98	82.372	Labrus_bergylta
ENSPKIG00000025176	a1cf	100	82.245	ENSLACG00000008061	A1CF	100	82.245	Latimeria_chalumnae
ENSPKIG00000025176	a1cf	100	88.107	ENSLOCG00000006302	a1cf	100	88.107	Lepisosteus_oculatus
ENSPKIG00000025176	a1cf	100	79.201	ENSLAFG00000015462	A1CF	100	80.200	Loxodonta_africana
ENSPKIG00000025176	a1cf	100	79.431	ENSMFAG00000035948	A1CF	100	79.599	Macaca_fascicularis
ENSPKIG00000025176	a1cf	100	79.431	ENSMMUG00000007077	A1CF	100	79.599	Macaca_mulatta
ENSPKIG00000025176	a1cf	100	79.097	ENSMNEG00000031454	A1CF	100	79.264	Macaca_nemestrina
ENSPKIG00000025176	a1cf	100	80.268	ENSMLEG00000037223	A1CF	100	80.435	Mandrillus_leucophaeus
ENSPKIG00000025176	a1cf	100	78.723	ENSMAMG00000010402	a1cf	100	80.065	Mastacembelus_armatus
ENSPKIG00000025176	a1cf	100	81.364	ENSMZEG00005013245	a1cf	100	81.167	Maylandia_zebra
ENSPKIG00000025176	a1cf	100	81.104	ENSMGAG00000001507	A1CF	100	80.936	Meleagris_gallopavo
ENSPKIG00000025176	a1cf	100	79.035	ENSMAUG00000007422	A1cf	100	79.368	Mesocricetus_auratus
ENSPKIG00000025176	a1cf	100	77.318	ENSMICG00000003377	A1CF	100	78.146	Microcebus_murinus
ENSPKIG00000025176	a1cf	100	80.366	ENSMOCG00000021536	A1cf	100	80.532	Microtus_ochrogaster
ENSPKIG00000025176	a1cf	100	72.158	ENSMMOG00000009422	a1cf	100	73.311	Mola_mola
ENSPKIG00000025176	a1cf	92	79.455	ENSMODG00000016478	A1CF	99	80.182	Monodelphis_domestica
ENSPKIG00000025176	a1cf	100	76.119	ENSMALG00000012992	a1cf	100	76.119	Monopterus_albus
ENSPKIG00000025176	a1cf	100	79.534	MGP_CAROLIEiJ_G0022873	A1cf	100	79.368	Mus_caroli
ENSPKIG00000025176	a1cf	100	79.534	ENSMUSG00000052595	A1cf	99	85.570	Mus_musculus
ENSPKIG00000025176	a1cf	100	79.201	MGP_PahariEiJ_G0014366	A1cf	100	79.201	Mus_pahari
ENSPKIG00000025176	a1cf	100	79.201	MGP_SPRETEiJ_G0023792	A1cf	100	79.035	Mus_spretus
ENSPKIG00000025176	a1cf	100	74.582	ENSMPUG00000016971	A1CF	100	75.084	Mustela_putorius_furo
ENSPKIG00000025176	a1cf	100	79.201	ENSMLUG00000016071	A1CF	100	79.534	Myotis_lucifugus
ENSPKIG00000025176	a1cf	100	80.366	ENSNGAG00000015136	A1cf	100	80.200	Nannospalax_galili
ENSPKIG00000025176	a1cf	100	80.424	ENSNBRG00000001712	a1cf	100	80.914	Neolamprologus_brichardi
ENSPKIG00000025176	a1cf	100	80.532	ENSNLEG00000012028	A1CF	100	80.532	Nomascus_leucogenys
ENSPKIG00000025176	a1cf	94	80.142	ENSMEUG00000015909	A1CF	100	79.965	Notamacropus_eugenii
ENSPKIG00000025176	a1cf	89	72.075	ENSOPRG00000010667	A1CF	97	71.455	Ochotona_princeps
ENSPKIG00000025176	a1cf	100	81.077	ENSONIG00000019105	a1cf	100	80.914	Oreochromis_niloticus
ENSPKIG00000025176	a1cf	79	80.679	ENSOANG00000007360	A1CF	99	80.679	Ornithorhynchus_anatinus
ENSPKIG00000025176	a1cf	100	78.405	ENSOCUG00000011587	A1CF	100	78.405	Oryctolagus_cuniculus
ENSPKIG00000025176	a1cf	100	78.454	ENSORLG00000013342	a1cf	100	78.325	Oryzias_latipes
ENSPKIG00000025176	a1cf	100	78.887	ENSORLG00020000586	a1cf	100	79.378	Oryzias_latipes_hni
ENSPKIG00000025176	a1cf	100	78.887	ENSORLG00015018569	a1cf	100	79.378	Oryzias_latipes_hsok
ENSPKIG00000025176	a1cf	100	78.887	ENSOMEG00000013531	a1cf	100	78.396	Oryzias_melastigma
ENSPKIG00000025176	a1cf	100	79.264	ENSOGAG00000012884	A1CF	100	80.268	Otolemur_garnettii
ENSPKIG00000025176	a1cf	100	80.532	ENSOARG00000013695	A1CF	100	80.699	Ovis_aries
ENSPKIG00000025176	a1cf	98	78.680	ENSPPAG00000028115	A1CF	99	84.369	Pan_paniscus
ENSPKIG00000025176	a1cf	100	79.599	ENSPPRG00000012180	A1CF	100	79.833	Panthera_pardus
ENSPKIG00000025176	a1cf	100	79.599	ENSPTIG00000021223	A1CF	100	79.833	Panthera_tigris_altaica
ENSPKIG00000025176	a1cf	100	80.500	ENSPTRG00000002508	A1CF	100	80.667	Pan_troglodytes
ENSPKIG00000025176	a1cf	100	79.431	ENSPANG00000021988	A1CF	100	79.599	Papio_anubis
ENSPKIG00000025176	a1cf	100	78.894	ENSPSIG00000010318	A1CF	100	78.727	Pelodiscus_sinensis
ENSPKIG00000025176	a1cf	98	70.187	ENSPMGG00000013359	a1cf	99	71.138	Periophthalmus_magnuspinnatus
ENSPKIG00000025176	a1cf	100	79.867	ENSPEMG00000015021	A1cf	100	79.700	Peromyscus_maniculatus_bairdii
ENSPKIG00000025176	a1cf	100	79.564	ENSPCIG00000002175	A1CF	100	80.067	Phascolarctos_cinereus
ENSPKIG00000025176	a1cf	100	80.130	ENSPFOG00000007437	-	100	81.107	Poecilia_formosa
ENSPKIG00000025176	a1cf	100	80.130	ENSPFOG00000006683	a1cf	100	81.107	Poecilia_formosa
ENSPKIG00000025176	a1cf	100	78.990	ENSPLAG00000000026	a1cf	100	79.967	Poecilia_latipinna
ENSPKIG00000025176	a1cf	100	78.990	ENSPLAG00000001210	-	100	79.967	Poecilia_latipinna
ENSPKIG00000025176	a1cf	100	72.222	ENSPMEG00000015529	-	100	73.203	Poecilia_mexicana
ENSPKIG00000025176	a1cf	100	71.242	ENSPMEG00000000921	a1cf	100	72.222	Poecilia_mexicana
ENSPKIG00000025176	a1cf	100	79.967	ENSPREG00000016298	a1cf	100	80.945	Poecilia_reticulata
ENSPKIG00000025176	a1cf	100	79.534	ENSPPYG00000002819	A1CF	100	79.534	Pongo_abelii
ENSPKIG00000025176	a1cf	80	63.598	ENSPCAG00000006463	A1CF	79	63.598	Procavia_capensis
ENSPKIG00000025176	a1cf	100	78.738	ENSPCOG00000024172	A1CF	100	79.734	Propithecus_coquereli
ENSPKIG00000025176	a1cf	100	81.566	ENSPNYG00000017944	a1cf	100	82.055	Pundamilia_nyererei
ENSPKIG00000025176	a1cf	100	87.417	ENSPNAG00000007704	a1cf	100	87.583	Pygocentrus_nattereri
ENSPKIG00000025176	a1cf	100	78.369	ENSRNOG00000033195	A1cf	100	78.203	Rattus_norvegicus
ENSPKIG00000025176	a1cf	100	75.167	ENSRBIG00000042892	A1CF	100	78.599	Rhinopithecus_bieti
ENSPKIG00000025176	a1cf	100	80.602	ENSRROG00000041398	A1CF	100	80.769	Rhinopithecus_roxellana
ENSPKIG00000025176	a1cf	100	80.366	ENSSBOG00000021930	A1CF	100	80.366	Saimiri_boliviensis_boliviensis
ENSPKIG00000025176	a1cf	100	80.435	ENSSHAG00000005096	A1CF	100	80.435	Sarcophilus_harrisii
ENSPKIG00000025176	a1cf	100	89.073	ENSSFOG00015011774	a1cf	100	89.570	Scleropages_formosus
ENSPKIG00000025176	a1cf	100	80.130	ENSSMAG00000013271	a1cf	100	80.293	Scophthalmus_maximus
ENSPKIG00000025176	a1cf	100	81.713	ENSSDUG00000013930	a1cf	100	81.426	Seriola_dumerili
ENSPKIG00000025176	a1cf	100	75.541	ENSSLDG00000004290	a1cf	100	74.422	Seriola_lalandi_dorsalis
ENSPKIG00000025176	a1cf	95	70.228	ENSSARG00000005940	A1CF	95	70.403	Sorex_araneus
ENSPKIG00000025176	a1cf	95	79.298	ENSSPUG00000006797	A1CF	95	78.947	Sphenodon_punctatus
ENSPKIG00000025176	a1cf	100	81.364	ENSSSCG00000010431	A1CF	100	81.364	Sus_scrofa
ENSPKIG00000025176	a1cf	100	81.426	ENSTGUG00000005090	A1CF	100	81.426	Taeniopygia_guttata
ENSPKIG00000025176	a1cf	100	78.303	ENSTRUG00000001982	a1cf	100	77.977	Takifugu_rubripes
ENSPKIG00000025176	a1cf	100	78.374	ENSTNIG00000003580	a1cf	100	77.724	Tetraodon_nigroviridis
ENSPKIG00000025176	a1cf	98	73.005	ENSTTRG00000013190	A1CF	96	73.175	Tursiops_truncatus
ENSPKIG00000025176	a1cf	100	79.097	ENSUAMG00000020065	A1CF	100	79.431	Ursus_americanus
ENSPKIG00000025176	a1cf	100	80.067	ENSUMAG00000011162	A1CF	100	80.235	Ursus_maritimus
ENSPKIG00000025176	a1cf	87	77.040	ENSVPAG00000006130	A1CF	86	77.040	Vicugna_pacos
ENSPKIG00000025176	a1cf	100	79.397	ENSVVUG00000002504	A1CF	100	79.397	Vulpes_vulpes
ENSPKIG00000025176	a1cf	100	75.712	ENSXETG00000006611	a1cf	100	75.544	Xenopus_tropicalis
ENSPKIG00000025176	a1cf	100	80.820	ENSXCOG00000003302	a1cf	100	80.820	Xiphophorus_couchianus
ENSPKIG00000025176	a1cf	100	81.803	ENSXMAG00000016703	a1cf	100	81.803	Xiphophorus_maculatus