EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000025356 (Gene tree)
Gene ID
111838769
Gene Symbol
pabpc4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Plus strand
Length
14069 bases
Position
chrPGUA01000674.1:132711-146779
Accession
111838769
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000010787PABPPF00658.181.6e-3111
ENSPKIP00000010777PABPPF00658.181.8e-3111
ENSPKIP00000010781PABPPF00658.181.8e-3111
ENSPKIP00000010770PABPPF00658.182.1e-2811
ENSPKIP00000010787RRM_5PF13893.61.6e-0811
ENSPKIP00000010770RRM_5PF13893.61.6e-0811
ENSPKIP00000010777RRM_5PF13893.61.9e-0811
ENSPKIP00000010781RRM_5PF13893.61.9e-0811
ENSPKIP00000010787RRM_1PF00076.228.5e-9014
ENSPKIP00000010787RRM_1PF00076.228.5e-9024
ENSPKIP00000010787RRM_1PF00076.228.5e-9034
ENSPKIP00000010787RRM_1PF00076.228.5e-9044
ENSPKIP00000010770RRM_1PF00076.228.8e-9014
ENSPKIP00000010770RRM_1PF00076.228.8e-9024
ENSPKIP00000010770RRM_1PF00076.228.8e-9034
ENSPKIP00000010770RRM_1PF00076.228.8e-9044
ENSPKIP00000010777RRM_1PF00076.221e-8914
ENSPKIP00000010777RRM_1PF00076.221e-8924
ENSPKIP00000010777RRM_1PF00076.221e-8934
ENSPKIP00000010777RRM_1PF00076.221e-8944
ENSPKIP00000010781RRM_1PF00076.221e-8914
ENSPKIP00000010781RRM_1PF00076.221e-8924
ENSPKIP00000010781RRM_1PF00076.221e-8934
ENSPKIP00000010781RRM_1PF00076.221e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000034917-3837-ENSPKIP00000010781638 (aa)XP_023657829UPI000CD655FC
ENSPKIT00000034924-1857-ENSPKIP00000010787618 (aa)--
ENSPKIT00000034913-6292-ENSPKIP00000010777638 (aa)XP_023657829UPI000CD655FC
ENSPKIT00000034906-6628-ENSPKIP00000010770618 (aa)--
Gene Model
Click here to download ENSPKIG00000025356's gene model file
Pathways
Pathway IDPathway NameSource
pki03013RNA transportKEGG
pki03015mRNA surveillance pathwayKEGG
pki03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025356's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000025356pabpc49869.919ENSPKIG00000007322pabpc1l10069.401
ENSPKIG00000025356pabpc45971.094ENSPKIG00000002905-8871.094
ENSPKIG00000025356pabpc45936.145ENSPKIG00000001903-8936.145
ENSPKIG00000025356pabpc45289.600ENSPKIG00000016810-9589.600
ENSPKIG00000025356pabpc45936.145ENSPKIG00000006187ELAVL28736.145
ENSPKIG00000025356pabpc46131.522ENSPKIG00000020270HNRNPA06430.890
ENSPKIG00000025356pabpc45938.095ENSPKIG00000007461-5138.095
ENSPKIG00000025356pabpc45831.818ENSPKIG00000005355tial17931.818
ENSPKIG00000025356pabpc49876.959ENSPKIG00000005676pabpc1b9976.489
ENSPKIG00000025356pabpc45971.094ENSPKIG00000002089-8871.094
ENSPKIG00000025356pabpc46036.145ENSPKIG00000016207elavl39236.145
ENSPKIG00000025356pabpc45737.500ENSPKIG00000025033-5838.372
ENSPKIG00000025356pabpc45931.288ENSPKIG00000015511trnau1apa5731.288
ENSPKIG00000025356pabpc46134.940ENSPKIG00000006999elavl48934.940
ENSPKIG00000025356pabpc46034.211ENSPKIG00000003894ELAVL19034.437
ENSPKIG00000025356pabpc47868.908ENSPKIG00000016835-9767.647
ENSPKIG00000025356pabpc45933.775ENSPKIG00000023897-9033.775
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000025356pabpc49985.443ENSG00000090621PABPC49997.297Homo_sapiens
ENSPKIG00000025356pabpc49991.733ENSAPOG00000001161pabpc410090.752Acanthochromis_polyacanthus
ENSPKIG00000025356pabpc49981.694ENSAMEG00000011535-9981.089Ailuropoda_melanoleuca
ENSPKIG00000025356pabpc49850.082ENSAMEG00000015083-9950.082Ailuropoda_melanoleuca
ENSPKIG00000025356pabpc410090.439ENSACIG00000023343pabpc410090.439Amphilophus_citrinellus
ENSPKIG00000025356pabpc49990.820ENSAOCG00000021529pabpc410090.282Amphiprion_ocellaris
ENSPKIG00000025356pabpc49990.820ENSAPEG00000019196pabpc410090.282Amphiprion_percula
ENSPKIG00000025356pabpc49990.635ENSATEG00000007402pabpc410089.828Anabas_testudineus
ENSPKIG00000025356pabpc49988.013ENSAPLG00000009729-9987.382Anas_platyrhynchos
ENSPKIG00000025356pabpc49886.477ENSACAG00000002544PABPC49985.765Anolis_carolinensis
ENSPKIG00000025356pabpc49985.443ENSANAG00000025079PABPC49984.810Aotus_nancymaae
ENSPKIG00000025356pabpc410090.596ENSACLG00000019558pabpc410090.596Astatotilapia_calliptera
ENSPKIG00000025356pabpc49986.772ENSAMXG00000018779pabpc49986.772Astyanax_mexicanus
ENSPKIG00000025356pabpc49982.562ENSBTAG00000017125PABPC49982.407Bos_taurus
ENSPKIG00000025356pabpc45983.929ENSBTAG00000048536-9383.929Bos_taurus
ENSPKIG00000025356pabpc47186.735ENSCJAG00000045953-9474.494Callithrix_jacchus
ENSPKIG00000025356pabpc49985.443ENSCJAG00000002512-9984.810Callithrix_jacchus
ENSPKIG00000025356pabpc49985.601ENSCAFG00000003081PABPC49984.968Canis_familiaris
ENSPKIG00000025356pabpc49886.139ENSCAFG00020004161PABPC49981.241Canis_lupus_dingo
ENSPKIG00000025356pabpc49981.694ENSCHIG00000019398-9981.089Capra_hircus
ENSPKIG00000025356pabpc49967.031ENSCHIG00000023385-9966.562Capra_hircus
ENSPKIG00000025356pabpc49985.443ENSTSYG00000006532PABPC49984.810Carlito_syrichta
ENSPKIG00000025356pabpc49985.285ENSCAPG00000015984PABPC410084.641Cavia_aperea
ENSPKIG00000025356pabpc49985.601ENSCPOG00000009552PABPC49984.968Cavia_porcellus
ENSPKIG00000025356pabpc49985.127ENSCCAG00000037306PABPC49984.494Cebus_capucinus
ENSPKIG00000025356pabpc49985.443ENSCATG00000042164PABPC49984.810Cercocebus_atys
ENSPKIG00000025356pabpc49985.443ENSCLAG00000011899PABPC49984.810Chinchilla_lanigera
ENSPKIG00000025356pabpc49981.694ENSCSAG00000001135PABPC49981.089Chlorocebus_sabaeus
ENSPKIG00000025356pabpc48789.737ENSCHOG00000005327PABPC48189.737Choloepus_hoffmanni
ENSPKIG00000025356pabpc49988.644ENSCPBG00000001038PABPC49988.013Chrysemys_picta_bellii
ENSPKIG00000025356pabpc49885.440ENSCANG00000034177PABPC49984.800Colobus_angolensis_palliatus
ENSPKIG00000025356pabpc49884.959ENSCGRG00001018166Pabpc49984.142Cricetulus_griseus_chok1gshd
ENSPKIG00000025356pabpc49785.092ENSCGRG00000009777Pabpc410083.307Cricetulus_griseus_crigri
ENSPKIG00000025356pabpc410089.812ENSCSEG00000000130pabpc410089.812Cynoglossus_semilaevis
ENSPKIG00000025356pabpc49791.613ENSCVAG00000019246pabpc49991.613Cyprinodon_variegatus
ENSPKIG00000025356pabpc49992.951ENSDARG00000059259pabpc410093.554Danio_rerio
ENSPKIG00000025356pabpc49884.369ENSDNOG00000018444-9983.659Dasypus_novemcinctus
ENSPKIG00000025356pabpc49982.589ENSDORG00000011581Pabpc49982.689Dipodomys_ordii
ENSPKIG00000025356pabpc48554.945ENSETEG00000009172-9953.902Echinops_telfairi
ENSPKIG00000025356pabpc49995.161ENSETEG00000018453-8495.161Echinops_telfairi
ENSPKIG00000025356pabpc49876.809ENSEBUG00000013782pabpc49977.157Eptatretus_burgeri
ENSPKIG00000025356pabpc49876.557ENSEBUG00000000992pabpc49976.557Eptatretus_burgeri
ENSPKIG00000025356pabpc49981.846ENSEASG00005014119PABPC49981.241Equus_asinus_asinus
ENSPKIG00000025356pabpc49981.846ENSECAG00000009396PABPC49981.241Equus_caballus
ENSPKIG00000025356pabpc49880.472ENSEEUG00000002962PABPC49979.879Erinaceus_europaeus
ENSPKIG00000025356pabpc49992.144ENSELUG00000003195pabpc49992.405Esox_lucius
ENSPKIG00000025356pabpc49985.601ENSFCAG00000015254-9984.968Felis_catus
ENSPKIG00000025356pabpc49988.486ENSFALG00000000543PABPC49987.855Ficedula_albicollis
ENSPKIG00000025356pabpc49981.392ENSFDAG00000020016-9981.241Fukomys_damarensis
ENSPKIG00000025356pabpc48953.700ENSFDAG00000010581-9951.546Fukomys_damarensis
ENSPKIG00000025356pabpc49990.984ENSFHEG00000007548pabpc49990.709Fundulus_heteroclitus
ENSPKIG00000025356pabpc410088.088ENSGMOG00000019025pabpc49988.522Gadus_morhua
ENSPKIG00000025356pabpc49888.590ENSGALG00000003800PABPC49987.956Gallus_gallus
ENSPKIG00000025356pabpc49896.411ENSGAFG00000018195pabpc49898.333Gambusia_affinis
ENSPKIG00000025356pabpc410088.245ENSGACG00000007179pabpc410088.263Gasterosteus_aculeatus
ENSPKIG00000025356pabpc49988.801ENSGAGG00000001888PABPC49988.170Gopherus_agassizii
ENSPKIG00000025356pabpc49985.443ENSGGOG00000004002PABPC49984.810Gorilla_gorilla
ENSPKIG00000025356pabpc410090.439ENSHBUG00000020206pabpc410090.439Haplochromis_burtoni
ENSPKIG00000025356pabpc49982.844ENSHGLG00000011162PABPC49984.810Heterocephalus_glaber_female
ENSPKIG00000025356pabpc49982.844ENSHGLG00100001580PABPC49984.810Heterocephalus_glaber_male
ENSPKIG00000025356pabpc410088.871ENSHCOG00000012694pabpc410089.655Hippocampus_comes
ENSPKIG00000025356pabpc49891.763ENSIPUG00000016620pabpc49991.930Ictalurus_punctatus
ENSPKIG00000025356pabpc49984.469ENSSTOG00000010416PABPC49983.968Ictidomys_tridecemlineatus
ENSPKIG00000025356pabpc49981.550ENSJJAG00000007781Pabpc49981.269Jaculus_jaculus
ENSPKIG00000025356pabpc49989.780ENSKMAG00000013597pabpc49990.407Kryptolebias_marmoratus
ENSPKIG00000025356pabpc410089.828ENSLBEG00000013654pabpc49989.828Labrus_bergylta
ENSPKIG00000025356pabpc49988.189ENSLACG00000011907PABPC49987.717Latimeria_chalumnae
ENSPKIG00000025356pabpc49992.131ENSLOCG00000001877pabpc410091.969Lepisosteus_oculatus
ENSPKIG00000025356pabpc49984.628ENSLAFG00000000151PABPC49984.127Loxodonta_africana
ENSPKIG00000025356pabpc49985.443ENSMFAG00000041481PABPC49984.810Macaca_fascicularis
ENSPKIG00000025356pabpc49981.694ENSMMUG00000007497PABPC49981.089Macaca_mulatta
ENSPKIG00000025356pabpc49985.443ENSMNEG00000043054PABPC49984.810Macaca_nemestrina
ENSPKIG00000025356pabpc49985.443ENSMLEG00000040716PABPC49984.810Mandrillus_leucophaeus
ENSPKIG00000025356pabpc49991.415ENSMAMG00000010025pabpc410090.596Mastacembelus_armatus
ENSPKIG00000025356pabpc410090.439ENSMZEG00005006141pabpc410090.439Maylandia_zebra
ENSPKIG00000025356pabpc49883.784ENSMGAG00000005408PABPC49983.559Meleagris_gallopavo
ENSPKIG00000025356pabpc47492.208ENSMAUG00000019763-7792.208Mesocricetus_auratus
ENSPKIG00000025356pabpc45880.702ENSMAUG00000004089-9280.702Mesocricetus_auratus
ENSPKIG00000025356pabpc47380.000ENSMAUG00000001295-9778.571Mesocricetus_auratus
ENSPKIG00000025356pabpc49875.000ENSMICG00000036729-9975.000Microcebus_murinus
ENSPKIG00000025356pabpc49184.164ENSMICG00000016633-9983.837Microcebus_murinus
ENSPKIG00000025356pabpc49885.974ENSMOCG00000006763Pabpc49984.169Microtus_ochrogaster
ENSPKIG00000025356pabpc49988.585ENSMMOG00000002363pabpc49989.550Mola_mola
ENSPKIG00000025356pabpc49984.194ENSMODG00000017657-9983.788Monodelphis_domestica
ENSPKIG00000025356pabpc46170.933ENSMODG00000018051-9670.933Monodelphis_domestica
ENSPKIG00000025356pabpc49991.442ENSMALG00000011017pabpc410090.625Monopterus_albus
ENSPKIG00000025356pabpc49772.318MGP_CAROLIEiJ_G0024864-9973.205Mus_caroli
ENSPKIG00000025356pabpc49981.146MGP_CAROLIEiJ_G0026435-10097.163Mus_caroli
ENSPKIG00000025356pabpc49985.285ENSMUSG00000011257Pabpc49996.386Mus_musculus
ENSPKIG00000025356pabpc49881.040MGP_PahariEiJ_G0028765Pabpc410097.872Mus_pahari
ENSPKIG00000025356pabpc49870.844MGP_SPRETEiJ_G0027415Pabpc410097.872Mus_spretus
ENSPKIG00000025356pabpc49981.846ENSMPUG00000014414-9981.241Mustela_putorius_furo
ENSPKIG00000025356pabpc49747.430ENSMPUG00000006836-10046.854Mustela_putorius_furo
ENSPKIG00000025356pabpc49984.603ENSMLUG00000012068PABPC49983.968Myotis_lucifugus
ENSPKIG00000025356pabpc49984.469ENSNGAG00000018292Pabpc49983.845Nannospalax_galili
ENSPKIG00000025356pabpc46197.596ENSNBRG00000009708pabpc49897.596Neolamprologus_brichardi
ENSPKIG00000025356pabpc46696.386ENSNBRG00000010047-7296.386Neolamprologus_brichardi
ENSPKIG00000025356pabpc49985.443ENSNLEG00000011928PABPC49984.810Nomascus_leucogenys
ENSPKIG00000025356pabpc48790.476ENSOPRG00000011984PABPC48690.476Ochotona_princeps
ENSPKIG00000025356pabpc49985.127ENSODEG00000006592-9984.494Octodon_degus
ENSPKIG00000025356pabpc45483.571ENSODEG00000013457-10083.571Octodon_degus
ENSPKIG00000025356pabpc49876.211ENSODEG00000017434-9974.737Octodon_degus
ENSPKIG00000025356pabpc410090.596ENSONIG00000008176pabpc410090.596Oreochromis_niloticus
ENSPKIG00000025356pabpc49987.975ENSOANG00000010001PABPC49987.342Ornithorhynchus_anatinus
ENSPKIG00000025356pabpc49882.047ENSOCUG00000000562PABPC48881.417Oryctolagus_cuniculus
ENSPKIG00000025356pabpc49994.769ENSORLG00000017479pabpc49994.769Oryzias_latipes
ENSPKIG00000025356pabpc49994.769ENSORLG00020018644pabpc49994.769Oryzias_latipes_hni
ENSPKIG00000025356pabpc49994.769ENSORLG00015015042pabpc49994.769Oryzias_latipes_hsok
ENSPKIG00000025356pabpc49989.508ENSOMEG00000014410pabpc49989.449Oryzias_melastigma
ENSPKIG00000025356pabpc49982.154ENSOGAG00000004067PABPC49982.435Otolemur_garnettii
ENSPKIG00000025356pabpc49981.694ENSOARG00000020060PABPC49981.089Ovis_aries
ENSPKIG00000025356pabpc49985.443ENSPPAG00000043625PABPC49984.810Pan_paniscus
ENSPKIG00000025356pabpc49985.601ENSPPRG00000024727PABPC49984.968Panthera_pardus
ENSPKIG00000025356pabpc49985.601ENSPTIG00000005829PABPC49984.968Panthera_tigris_altaica
ENSPKIG00000025356pabpc49985.443ENSPTRG00000000573PABPC49984.810Pan_troglodytes
ENSPKIG00000025356pabpc49985.443ENSPANG00000009484PABPC49984.810Papio_anubis
ENSPKIG00000025356pabpc49988.959ENSPSIG00000016892PABPC49988.328Pelodiscus_sinensis
ENSPKIG00000025356pabpc410088.673ENSPMGG00000009073pabpc410089.482Periophthalmus_magnuspinnatus
ENSPKIG00000025356pabpc49984.567ENSPEMG00000023569-9983.937Peromyscus_maniculatus_bairdii
ENSPKIG00000025356pabpc49979.199ENSPEMG00000024193-9979.875Peromyscus_maniculatus_bairdii
ENSPKIG00000025356pabpc49075.175ENSPMAG00000002836pabpc49975.874Petromyzon_marinus
ENSPKIG00000025356pabpc49770.686ENSPMAG00000007885pabpc49971.487Petromyzon_marinus
ENSPKIG00000025356pabpc49987.602ENSPCIG00000020674PABPC49994.175Phascolarctos_cinereus
ENSPKIG00000025356pabpc49990.079ENSPFOG00000002682pabpc49990.079Poecilia_formosa
ENSPKIG00000025356pabpc49990.492ENSPLAG00000010112pabpc49990.236Poecilia_latipinna
ENSPKIG00000025356pabpc49990.492ENSPMEG00000019739pabpc49990.236Poecilia_mexicana
ENSPKIG00000025356pabpc49990.820ENSPREG00000001589pabpc49990.709Poecilia_reticulata
ENSPKIG00000025356pabpc49981.694ENSPPYG00000001506PABPC49981.089Pongo_abelii
ENSPKIG00000025356pabpc49976.888ENSPCAG00000003341PABPC49976.399Procavia_capensis
ENSPKIG00000025356pabpc49984.992ENSPCOG00000023725-9984.676Propithecus_coquereli
ENSPKIG00000025356pabpc49869.459ENSPCOG00000025882-9581.000Propithecus_coquereli
ENSPKIG00000025356pabpc49780.435ENSPVAG00000002187PABPC49979.766Pteropus_vampyrus
ENSPKIG00000025356pabpc410090.596ENSPNYG00000006134pabpc410090.596Pundamilia_nyererei
ENSPKIG00000025356pabpc49892.834ENSPNAG00000024355pabpc49992.834Pygocentrus_nattereri
ENSPKIG00000025356pabpc49982.126ENSRNOG00000015642Pabpc49982.226Rattus_norvegicus
ENSPKIG00000025356pabpc49980.277ENSRNOG00000028592AABR07035074.19980.495Rattus_norvegicus
ENSPKIG00000025356pabpc49985.443ENSRBIG00000039761PABPC49984.810Rhinopithecus_bieti
ENSPKIG00000025356pabpc49985.443ENSRROG00000033355PABPC49984.810Rhinopithecus_roxellana
ENSPKIG00000025356pabpc49985.127ENSSBOG00000026193PABPC49984.494Saimiri_boliviensis_boliviensis
ENSPKIG00000025356pabpc49987.439ENSSHAG00000018139PABPC49986.909Sarcophilus_harrisii
ENSPKIG00000025356pabpc49894.059ENSSFOG00015023514pabpc49994.059Scleropages_formosus
ENSPKIG00000025356pabpc49990.317ENSSMAG00000009007pabpc49990.317Scophthalmus_maximus
ENSPKIG00000025356pabpc49991.097ENSSDUG00000012683pabpc410090.282Seriola_dumerili
ENSPKIG00000025356pabpc49991.097ENSSLDG00000013025pabpc410090.282Seriola_lalandi_dorsalis
ENSPKIG00000025356pabpc49974.773ENSSARG00000000310PABPC49974.169Sorex_araneus
ENSPKIG00000025356pabpc49987.658ENSSPUG00000003204PABPC49987.025Sphenodon_punctatus
ENSPKIG00000025356pabpc49991.415ENSSPAG00000009252pabpc410090.439Stegastes_partitus
ENSPKIG00000025356pabpc48845.053ENSSSCG00000036170-9545.173Sus_scrofa
ENSPKIG00000025356pabpc49985.466ENSSSCG00000003660-9984.968Sus_scrofa
ENSPKIG00000025356pabpc49983.333ENSTGUG00000001266PABPC49983.910Taeniopygia_guttata
ENSPKIG00000025356pabpc49990.409ENSTRUG00000005907pabpc49990.409Takifugu_rubripes
ENSPKIG00000025356pabpc410085.215ENSTNIG00000016902pabpc410085.215Tetraodon_nigroviridis
ENSPKIG00000025356pabpc49870.401ENSTBEG00000009035PABPC49969.900Tupaia_belangeri
ENSPKIG00000025356pabpc49860.531ENSTTRG00000014340PABPC49969.064Tursiops_truncatus
ENSPKIG00000025356pabpc49985.601ENSUAMG00000000303PABPC49984.968Ursus_americanus
ENSPKIG00000025356pabpc49990.227ENSUMAG00000019585PABPC49991.014Ursus_maritimus
ENSPKIG00000025356pabpc46780.645ENSVPAG00000010041PABPC47171.217Vicugna_pacos
ENSPKIG00000025356pabpc49985.601ENSVVUG00000005215PABPC49984.968Vulpes_vulpes
ENSPKIG00000025356pabpc46997.041ENSXETG00000027221-10097.041Xenopus_tropicalis
ENSPKIG00000025356pabpc49983.150ENSXETG00000010946pabpc49982.650Xenopus_tropicalis
ENSPKIG00000025356pabpc49896.042ENSXCOG00000013190pabpc49694.340Xiphophorus_couchianus
ENSPKIG00000025356pabpc49990.656ENSXMAG00000019007pabpc49990.551Xiphophorus_maculatus

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