EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000025417 (Gene tree)
Gene ID: 111840587
Gene Symbol: rbm38
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 11717 bases
Position: chrPGUA01000080.1:2125501-2137217
Accession: 111840587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000010873	RRM_1	PF00076.22	6.9e-17	1	1
ENSPKIP00000010875	RRM_1	PF00076.22	7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035011	-	1586	-	ENSPKIP00000010873	238 (aa)	XP_023661340	UPI000CD631E8
ENSPKIT00000035013	-	729	-	ENSPKIP00000010875	242 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000025417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000025417	rbm38	100	70.782	ENSPKIG00000018122	-	100	82.787
ENSPKIG00000025417	rbm38	72	35.385	ENSPKIG00000007038	-	56	35.385
ENSPKIG00000025417	rbm38	95	59.919	ENSPKIG00000001701	rbm24a	100	62.348
ENSPKIG00000025417	rbm38	95	56.098	ENSPKIG00000019760	-	100	57.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025417	rbm38	98	63.115	ENSG00000132819	RBM38	94	82.787	Homo_sapiens
ENSPKIG00000025417	rbm38	100	61.905	ENSAPOG00000003301	rbm38	98	60.317	Acanthochromis_polyacanthus
ENSPKIG00000025417	rbm38	100	70.281	ENSAPOG00000009939	-	100	70.683	Acanthochromis_polyacanthus
ENSPKIG00000025417	rbm38	100	70.492	ENSACIG00000012502	-	100	85.246	Amphilophus_citrinellus
ENSPKIG00000025417	rbm38	100	62.891	ENSACIG00000000010	rbm38	98	60.714	Amphilophus_citrinellus
ENSPKIG00000025417	rbm38	100	61.905	ENSAOCG00000013497	-	98	60.317	Amphiprion_ocellaris
ENSPKIG00000025417	rbm38	97	70.124	ENSAOCG00000012559	RBM38	99	70.539	Amphiprion_ocellaris
ENSPKIG00000025417	rbm38	100	61.905	ENSAPEG00000013137	rbm38	98	60.317	Amphiprion_percula
ENSPKIG00000025417	rbm38	100	69.880	ENSAPEG00000023581	-	100	70.281	Amphiprion_percula
ENSPKIG00000025417	rbm38	100	70.683	ENSATEG00000016710	-	100	70.683	Anabas_testudineus
ENSPKIG00000025417	rbm38	100	62.055	ENSATEG00000016366	rbm38	96	61.966	Anabas_testudineus
ENSPKIG00000025417	rbm38	95	65.086	ENSACAG00000016238	RBM38	90	64.807	Anolis_carolinensis
ENSPKIG00000025417	rbm38	92	66.520	ENSANAG00000031959	RBM38	84	85.849	Aotus_nancymaae
ENSPKIG00000025417	rbm38	100	71.200	ENSACLG00000019514	-	100	69.478	Astatotilapia_calliptera
ENSPKIG00000025417	rbm38	81	67.010	ENSAMXG00000038120	rbm38	81	67.010	Astyanax_mexicanus
ENSPKIG00000025417	rbm38	100	72.131	ENSAMXG00000015601	-	100	73.029	Astyanax_mexicanus
ENSPKIG00000025417	rbm38	98	62.705	ENSBTAG00000008105	RBM38	94	62.705	Bos_taurus
ENSPKIG00000025417	rbm38	53	67.939	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSPKIG00000025417	rbm38	98	63.115	ENSCJAG00000019139	RBM38	84	85.849	Callithrix_jacchus
ENSPKIG00000025417	rbm38	98	64.754	ENSCAFG00020021943	RBM38	94	64.754	Canis_lupus_dingo
ENSPKIG00000025417	rbm38	98	62.295	ENSCHIG00000002609	RBM38	94	62.295	Capra_hircus
ENSPKIG00000025417	rbm38	98	63.525	ENSCPOG00000012781	RBM38	94	63.525	Cavia_porcellus
ENSPKIG00000025417	rbm38	98	63.115	ENSCCAG00000036872	RBM38	84	85.849	Cebus_capucinus
ENSPKIG00000025417	rbm38	98	62.705	ENSCATG00000032133	RBM38	84	85.849	Cercocebus_atys
ENSPKIG00000025417	rbm38	98	63.934	ENSCLAG00000005906	RBM38	97	63.934	Chinchilla_lanigera
ENSPKIG00000025417	rbm38	98	62.705	ENSCSAG00000015503	RBM38	94	62.705	Chlorocebus_sabaeus
ENSPKIG00000025417	rbm38	95	66.234	ENSCPBG00000024059	RBM38	100	65.801	Chrysemys_picta_bellii
ENSPKIG00000025417	rbm38	65	60.494	ENSCING00000025102	-	70	58.929	Ciona_intestinalis
ENSPKIG00000025417	rbm38	64	58.228	ENSCSAVG00000001132	-	61	56.886	Ciona_savignyi
ENSPKIG00000025417	rbm38	98	46.888	ENSCANG00000030105	-	83	46.888	Colobus_angolensis_palliatus
ENSPKIG00000025417	rbm38	99	60.484	ENSCGRG00001012928	Rbm38	96	60.484	Cricetulus_griseus_chok1gshd
ENSPKIG00000025417	rbm38	100	67.068	ENSCSEG00000004701	-	100	67.611	Cynoglossus_semilaevis
ENSPKIG00000025417	rbm38	86	58.216	ENSCSEG00000020943	rbm38	61	61.376	Cynoglossus_semilaevis
ENSPKIG00000025417	rbm38	99	58.000	ENSCVAG00000015952	rbm38	98	58.000	Cyprinodon_variegatus
ENSPKIG00000025417	rbm38	100	70.281	ENSCVAG00000005472	-	100	70.281	Cyprinodon_variegatus
ENSPKIG00000025417	rbm38	99	69.038	ENSDARG00000058818	rbm38	100	69.038	Danio_rerio
ENSPKIG00000025417	rbm38	92	65.333	ENSDNOG00000032004	RBM38	98	65.333	Dasypus_novemcinctus
ENSPKIG00000025417	rbm38	98	62.705	ENSECAG00000007700	RBM38	94	62.705	Equus_caballus
ENSPKIG00000025417	rbm38	97	62.656	ENSEEUG00000013489	RBM38	92	63.900	Erinaceus_europaeus
ENSPKIG00000025417	rbm38	89	66.055	ENSELUG00000000585	-	89	65.315	Esox_lucius
ENSPKIG00000025417	rbm38	100	76.955	ENSELUG00000005849	-	100	74.486	Esox_lucius
ENSPKIG00000025417	rbm38	98	63.934	ENSFCAG00000042916	RBM38	84	84.906	Felis_catus
ENSPKIG00000025417	rbm38	75	71.429	ENSFALG00000010805	RBM38	90	73.034	Ficedula_albicollis
ENSPKIG00000025417	rbm38	100	70.492	ENSFHEG00000006160	-	100	69.672	Fundulus_heteroclitus
ENSPKIG00000025417	rbm38	100	58.268	ENSFHEG00000017748	rbm38	98	56.693	Fundulus_heteroclitus
ENSPKIG00000025417	rbm38	77	75.263	ENSGMOG00000016655	-	98	76.596	Gadus_morhua
ENSPKIG00000025417	rbm38	95	65.368	ENSGALG00000026081	RBM38	100	65.801	Gallus_gallus
ENSPKIG00000025417	rbm38	94	68.261	ENSGACG00000009873	-	100	67.391	Gasterosteus_aculeatus
ENSPKIG00000025417	rbm38	76	71.892	ENSGACG00000015224	rbm38	87	71.892	Gasterosteus_aculeatus
ENSPKIG00000025417	rbm38	95	65.801	ENSGAGG00000001187	RBM38	100	65.368	Gopherus_agassizii
ENSPKIG00000025417	rbm38	100	63.281	ENSHBUG00000012058	rbm38	98	60.714	Haplochromis_burtoni
ENSPKIG00000025417	rbm38	100	71.200	ENSHBUG00000011778	-	100	70.082	Haplochromis_burtoni
ENSPKIG00000025417	rbm38	98	61.317	ENSHGLG00000015077	RBM38	94	63.374	Heterocephalus_glaber_female
ENSPKIG00000025417	rbm38	84	76.585	ENSHCOG00000005622	-	56	77.500	Hippocampus_comes
ENSPKIG00000025417	rbm38	79	59.259	ENSHCOG00000019040	rbm38	73	59.358	Hippocampus_comes
ENSPKIG00000025417	rbm38	100	69.835	ENSIPUG00000019349	-	100	69.835	Ictalurus_punctatus
ENSPKIG00000025417	rbm38	92	56.540	ENSKMAG00000012402	rbm38	99	56.540	Kryptolebias_marmoratus
ENSPKIG00000025417	rbm38	100	70.492	ENSLBEG00000016163	RBM38	100	70.683	Labrus_bergylta
ENSPKIG00000025417	rbm38	100	60.392	ENSLBEG00000018878	rbm38	98	59.921	Labrus_bergylta
ENSPKIG00000025417	rbm38	100	78.243	ENSLOCG00000003456	rbm38	100	77.406	Lepisosteus_oculatus
ENSPKIG00000025417	rbm38	98	62.705	ENSMFAG00000043808	RBM38	84	85.849	Macaca_fascicularis
ENSPKIG00000025417	rbm38	98	62.705	ENSMMUG00000031391	RBM38	84	85.849	Macaca_mulatta
ENSPKIG00000025417	rbm38	98	62.705	ENSMNEG00000034683	RBM38	84	85.849	Macaca_nemestrina
ENSPKIG00000025417	rbm38	53	65.354	ENSMLEG00000043261	-	98	65.354	Mandrillus_leucophaeus
ENSPKIG00000025417	rbm38	100	71.774	ENSMAMG00000020499	RBM38	100	71.774	Mastacembelus_armatus
ENSPKIG00000025417	rbm38	100	62.109	ENSMAMG00000024135	rbm38	98	61.905	Mastacembelus_armatus
ENSPKIG00000025417	rbm38	100	71.200	ENSMZEG00005000849	-	100	70.082	Maylandia_zebra
ENSPKIG00000025417	rbm38	100	63.281	ENSMZEG00005026036	rbm38	98	60.714	Maylandia_zebra
ENSPKIG00000025417	rbm38	99	61.694	ENSMAUG00000021211	Rbm38	96	61.694	Mesocricetus_auratus
ENSPKIG00000025417	rbm38	92	66.520	ENSMICG00000038011	RBM38	98	66.079	Microcebus_murinus
ENSPKIG00000025417	rbm38	98	61.885	ENSMOCG00000008715	Rbm38	95	61.885	Microtus_ochrogaster
ENSPKIG00000025417	rbm38	100	71.084	ENSMMOG00000020051	-	100	71.084	Mola_mola
ENSPKIG00000025417	rbm38	100	62.000	ENSMODG00000016458	RBM38	100	62.800	Monodelphis_domestica
ENSPKIG00000025417	rbm38	79	78.238	ENSMALG00000004680	RBM38	72	78.238	Monopterus_albus
ENSPKIG00000025417	rbm38	71	67.630	ENSMALG00000022327	rbm38	72	67.630	Monopterus_albus
ENSPKIG00000025417	rbm38	99	60.081	MGP_CAROLIEiJ_G0024745	Rbm38	96	62.097	Mus_caroli
ENSPKIG00000025417	rbm38	99	60.081	ENSMUSG00000027510	Rbm38	96	62.097	Mus_musculus
ENSPKIG00000025417	rbm38	98	60.246	MGP_PahariEiJ_G0026186	Rbm38	96	61.694	Mus_pahari
ENSPKIG00000025417	rbm38	99	60.081	MGP_SPRETEiJ_G0025665	Rbm38	96	62.097	Mus_spretus
ENSPKIG00000025417	rbm38	74	72.283	ENSMPUG00000006518	RBM38	89	72.283	Mustela_putorius_furo
ENSPKIG00000025417	rbm38	92	64.317	ENSMLUG00000011140	RBM38	98	63.436	Myotis_lucifugus
ENSPKIG00000025417	rbm38	100	63.672	ENSNBRG00000022685	rbm38	97	62.348	Neolamprologus_brichardi
ENSPKIG00000025417	rbm38	100	70.683	ENSNBRG00000022545	-	100	69.478	Neolamprologus_brichardi
ENSPKIG00000025417	rbm38	56	66.667	ENSMEUG00000005475	-	100	66.667	Notamacropus_eugenii
ENSPKIG00000025417	rbm38	98	62.705	ENSODEG00000007980	RBM38	94	62.705	Octodon_degus
ENSPKIG00000025417	rbm38	99	63.137	ENSONIG00000017073	rbm38	100	60.558	Oreochromis_niloticus
ENSPKIG00000025417	rbm38	99	70.565	ENSONIG00000020324	-	100	69.355	Oreochromis_niloticus
ENSPKIG00000025417	rbm38	92	65.179	ENSOANG00000009259	RBM38	81	65.179	Ornithorhynchus_anatinus
ENSPKIG00000025417	rbm38	100	55.686	ENSORLG00000012154	rbm38	100	53.906	Oryzias_latipes
ENSPKIG00000025417	rbm38	100	68.127	ENSORLG00000027180	-	100	68.526	Oryzias_latipes
ENSPKIG00000025417	rbm38	100	57.087	ENSORLG00020017871	rbm38	100	54.688	Oryzias_latipes_hni
ENSPKIG00000025417	rbm38	100	68.127	ENSORLG00020020751	-	100	68.526	Oryzias_latipes_hni
ENSPKIG00000025417	rbm38	100	68.000	ENSORLG00015017040	-	100	68.400	Oryzias_latipes_hsok
ENSPKIG00000025417	rbm38	100	57.647	ENSORLG00015012606	rbm38	100	55.172	Oryzias_latipes_hsok
ENSPKIG00000025417	rbm38	99	57.540	ENSOMEG00000006805	rbm38	100	54.688	Oryzias_melastigma
ENSPKIG00000025417	rbm38	100	68.273	ENSOMEG00000023912	-	100	69.076	Oryzias_melastigma
ENSPKIG00000025417	rbm38	97	64.286	ENSOGAG00000029136	RBM38	91	64.286	Otolemur_garnettii
ENSPKIG00000025417	rbm38	98	63.934	ENSPPRG00000009507	RBM38	84	84.906	Panthera_pardus
ENSPKIG00000025417	rbm38	56	79.104	ENSPTRG00000045845	-	68	81.250	Pan_troglodytes
ENSPKIG00000025417	rbm38	87	64.815	ENSPTRG00000013661	RBM38	84	85.849	Pan_troglodytes
ENSPKIG00000025417	rbm38	96	50.840	ENSPANG00000033127	-	96	50.840	Papio_anubis
ENSPKIG00000025417	rbm38	98	62.705	ENSPANG00000020919	-	84	85.849	Papio_anubis
ENSPKIG00000025417	rbm38	96	64.681	ENSPSIG00000011649	RBM38	94	64.255	Pelodiscus_sinensis
ENSPKIG00000025417	rbm38	99	60.159	ENSPMGG00000011343	rbm38	79	67.500	Periophthalmus_magnuspinnatus
ENSPKIG00000025417	rbm38	83	73.039	ENSPMGG00000017094	-	100	64.961	Periophthalmus_magnuspinnatus
ENSPKIG00000025417	rbm38	100	62.249	ENSPCIG00000013648	RBM38	100	62.249	Phascolarctos_cinereus
ENSPKIG00000025417	rbm38	83	63.158	ENSPFOG00000011658	rbm38	98	56.031	Poecilia_formosa
ENSPKIG00000025417	rbm38	83	62.679	ENSPLAG00000005218	rbm38	98	55.642	Poecilia_latipinna
ENSPKIG00000025417	rbm38	100	68.526	ENSPLAG00000002500	-	100	68.526	Poecilia_latipinna
ENSPKIG00000025417	rbm38	82	62.981	ENSPMEG00000015770	rbm38	98	55.642	Poecilia_mexicana
ENSPKIG00000025417	rbm38	83	62.679	ENSPREG00000007398	rbm38	98	55.642	Poecilia_reticulata
ENSPKIG00000025417	rbm38	97	64.286	ENSPCOG00000026201	RBM38	82	86.538	Propithecus_coquereli
ENSPKIG00000025417	rbm38	96	41.525	ENSPVAG00000006457	RBM38	67	86.885	Pteropus_vampyrus
ENSPKIG00000025417	rbm38	100	71.200	ENSPNYG00000019727	-	100	86.066	Pundamilia_nyererei
ENSPKIG00000025417	rbm38	100	62.109	ENSPNYG00000021373	rbm38	98	60.317	Pundamilia_nyererei
ENSPKIG00000025417	rbm38	99	63.180	ENSPNAG00000010596	rbm38	82	72.589	Pygocentrus_nattereri
ENSPKIG00000025417	rbm38	100	74.590	ENSPNAG00000015123	-	99	76.596	Pygocentrus_nattereri
ENSPKIG00000025417	rbm38	99	60.887	ENSRNOG00000006420	Rbm38	96	60.484	Rattus_norvegicus
ENSPKIG00000025417	rbm38	98	51.037	ENSRROG00000036388	-	93	51.037	Rhinopithecus_roxellana
ENSPKIG00000025417	rbm38	92	65.198	ENSSBOG00000031053	RBM38	95	85.849	Saimiri_boliviensis_boliviensis
ENSPKIG00000025417	rbm38	100	66.393	ENSSFOG00015004453	rbm38	100	71.311	Scleropages_formosus
ENSPKIG00000025417	rbm38	100	62.891	ENSSDUG00000022611	rbm38	98	60.714	Seriola_dumerili
ENSPKIG00000025417	rbm38	100	70.683	ENSSDUG00000021082	RBM38	100	70.683	Seriola_dumerili
ENSPKIG00000025417	rbm38	100	62.891	ENSSLDG00000010845	rbm38	99	60.000	Seriola_lalandi_dorsalis
ENSPKIG00000025417	rbm38	100	70.683	ENSSLDG00000011778	RBM38	100	70.683	Seriola_lalandi_dorsalis
ENSPKIG00000025417	rbm38	100	70.281	ENSSPAG00000020989	RBM38	100	70.281	Stegastes_partitus
ENSPKIG00000025417	rbm38	100	62.500	ENSSPAG00000011113	rbm38	98	60.714	Stegastes_partitus
ENSPKIG00000025417	rbm38	98	64.344	ENSSSCG00000007504	RBM38	94	64.344	Sus_scrofa
ENSPKIG00000025417	rbm38	100	70.916	ENSTRUG00000019869	-	100	70.120	Takifugu_rubripes
ENSPKIG00000025417	rbm38	100	58.893	ENSTRUG00000024954	rbm38	100	58.893	Takifugu_rubripes
ENSPKIG00000025417	rbm38	95	70.996	ENSTNIG00000007093	-	100	70.563	Tetraodon_nigroviridis
ENSPKIG00000025417	rbm38	98	63.525	ENSUAMG00000019780	RBM38	94	63.934	Ursus_americanus
ENSPKIG00000025417	rbm38	98	64.754	ENSVVUG00000017246	RBM38	94	64.754	Vulpes_vulpes
ENSPKIG00000025417	rbm38	95	63.404	ENSXETG00000011268	rbm38	99	64.255	Xenopus_tropicalis
ENSPKIG00000025417	rbm38	76	70.492	ENSXCOG00000017324	-	79	70.492	Xiphophorus_couchianus
ENSPKIG00000025417	rbm38	83	64.390	ENSXMAG00000023662	rbm38	98	56.917	Xiphophorus_maculatus