EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000025502 (Gene tree)
Gene ID: 111842367
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 14680 bases
Position: chrPGUA01000092.1:1239700-1254379
Accession: 111842367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011020	Upf2	PF04050.14	7.7e-31	1	1
ENSPKIP00000011018	Upf2	PF04050.14	8.1e-31	1	1
ENSPKIP00000011018	MIF4G	PF02854.19	4.9e-75	1	3
ENSPKIP00000011018	MIF4G	PF02854.19	4.9e-75	2	3
ENSPKIP00000011018	MIF4G	PF02854.19	4.9e-75	3	3
ENSPKIP00000011020	MIF4G	PF02854.19	5.3e-75	1	3
ENSPKIP00000011020	MIF4G	PF02854.19	5.3e-75	2	3
ENSPKIP00000011020	MIF4G	PF02854.19	5.3e-75	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035159	UPF2-202	3967	-	ENSPKIP00000011020	1321 (aa)	-	-
ENSPKIT00000035157	UPF2-201	3848	-	ENSPKIP00000011018	1277 (aa)	XP_023664649	UPI000CD64CC3

Gene Model

Click here to download ENSPKIG00000025502's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025502	UPF2	100	82.073	ENSG00000151461	UPF2	100	80.811	Homo_sapiens
ENSPKIG00000025502	UPF2	99	80.375	ENSAPOG00000015837	UPF2	100	82.252	Acanthochromis_polyacanthus
ENSPKIG00000025502	UPF2	100	81.123	ENSAMEG00000004586	UPF2	100	82.059	Ailuropoda_melanoleuca
ENSPKIG00000025502	UPF2	99	86.865	ENSACIG00000018078	UPF2	100	88.272	Amphilophus_citrinellus
ENSPKIG00000025502	UPF2	100	85.714	ENSAOCG00000016766	UPF2	100	88.368	Amphiprion_ocellaris
ENSPKIG00000025502	UPF2	100	85.792	ENSAPEG00000019084	UPF2	100	88.447	Amphiprion_percula
ENSPKIG00000025502	UPF2	100	86.505	ENSATEG00000021677	UPF2	99	87.910	Anabas_testudineus
ENSPKIG00000025502	UPF2	100	78.521	ENSAPLG00000010287	UPF2	90	82.302	Anas_platyrhynchos
ENSPKIG00000025502	UPF2	100	81.435	ENSACAG00000009259	UPF2	100	80.577	Anolis_carolinensis
ENSPKIG00000025502	UPF2	91	79.399	ENSANAG00000028451	UPF2	92	79.343	Aotus_nancymaae
ENSPKIG00000025502	UPF2	100	86.885	ENSACLG00000012696	UPF2	100	88.447	Astatotilapia_calliptera
ENSPKIG00000025502	UPF2	99	87.891	ENSAMXG00000013700	UPF2	99	87.344	Astyanax_mexicanus
ENSPKIG00000025502	UPF2	100	81.045	ENSBTAG00000000288	UPF2	100	80.343	Bos_taurus
ENSPKIG00000025502	UPF2	100	81.747	ENSCJAG00000020685	UPF2	100	81.591	Callithrix_jacchus
ENSPKIG00000025502	UPF2	100	81.201	ENSCAFG00000004839	UPF2	100	82.137	Canis_familiaris
ENSPKIG00000025502	UPF2	95	86.765	ENSCAFG00020005882	UPF2	99	86.735	Canis_lupus_dingo
ENSPKIG00000025502	UPF2	100	81.123	ENSCHIG00000020359	UPF2	100	80.421	Capra_hircus
ENSPKIG00000025502	UPF2	100	82.137	ENSTSYG00000000935	UPF2	100	82.059	Carlito_syrichta
ENSPKIG00000025502	UPF2	91	74.508	ENSCAPG00000016658	UPF2	94	74.138	Cavia_aperea
ENSPKIG00000025502	UPF2	99	78.223	ENSCPOG00000008809	UPF2	99	79.167	Cavia_porcellus
ENSPKIG00000025502	UPF2	100	75.507	ENSCCAG00000035991	UPF2	100	75.351	Cebus_capucinus
ENSPKIG00000025502	UPF2	100	82.073	ENSCATG00000032679	UPF2	100	80.811	Cercocebus_atys
ENSPKIG00000025502	UPF2	100	80.031	ENSCLAG00000011434	UPF2	100	80.967	Chinchilla_lanigera
ENSPKIG00000025502	UPF2	100	81.995	ENSCSAG00000013372	UPF2	100	80.733	Chlorocebus_sabaeus
ENSPKIG00000025502	UPF2	78	88.444	ENSCHOG00000000422	UPF2	80	88.444	Choloepus_hoffmanni
ENSPKIG00000025502	UPF2	99	80.859	ENSCPBG00000027823	UPF2	100	81.328	Chrysemys_picta_bellii
ENSPKIG00000025502	UPF2	78	49.066	ENSCSAVG00000007772	-	99	48.323	Ciona_savignyi
ENSPKIG00000025502	UPF2	99	77.149	ENSCANG00000040396	UPF2	100	76.112	Colobus_angolensis_palliatus
ENSPKIG00000025502	UPF2	100	80.874	ENSCGRG00001019347	Upf2	100	81.187	Cricetulus_griseus_chok1gshd
ENSPKIG00000025502	UPF2	100	80.874	ENSCGRG00000017993	Upf2	100	81.187	Cricetulus_griseus_crigri
ENSPKIG00000025502	UPF2	99	80.314	ENSCSEG00000003520	UPF2	99	79.505	Cynoglossus_semilaevis
ENSPKIG00000025502	UPF2	99	85.523	ENSCVAG00000006167	UPF2	100	86.772	Cyprinodon_variegatus
ENSPKIG00000025502	UPF2	100	81.045	ENSDNOG00000018160	UPF2	100	80.343	Dasypus_novemcinctus
ENSPKIG00000025502	UPF2	100	80.577	ENSDORG00000002478	Upf2	100	79.407	Dipodomys_ordii
ENSPKIG00000025502	UPF2	89	36.186	FBgn0029992	Upf2	90	40.220	Drosophila_melanogaster
ENSPKIG00000025502	UPF2	73	93.431	ENSETEG00000011583	-	62	93.182	Echinops_telfairi
ENSPKIG00000025502	UPF2	64	71.523	ENSEBUG00000012448	-	87	71.523	Eptatretus_burgeri
ENSPKIG00000025502	UPF2	100	80.265	ENSEASG00005019274	UPF2	100	81.123	Equus_asinus_asinus
ENSPKIG00000025502	UPF2	100	80.265	ENSECAG00000017022	UPF2	100	81.201	Equus_caballus
ENSPKIG00000025502	UPF2	82	76.101	ENSEEUG00000007819	UPF2	68	86.352	Erinaceus_europaeus
ENSPKIG00000025502	UPF2	99	85.737	ENSELUG00000012014	UPF2	100	86.916	Esox_lucius
ENSPKIG00000025502	UPF2	100	85.714	ENSFCAG00000005785	UPF2	100	82.137	Felis_catus
ENSPKIG00000025502	UPF2	100	82.371	ENSFALG00000001889	UPF2	98	83.229	Ficedula_albicollis
ENSPKIG00000025502	UPF2	100	80.109	ENSFDAG00000014348	UPF2	100	80.343	Fukomys_damarensis
ENSPKIG00000025502	UPF2	99	87.234	ENSFHEG00000009826	UPF2	100	87.234	Fundulus_heteroclitus
ENSPKIG00000025502	UPF2	90	87.133	ENSGMOG00000005557	UPF2	100	84.555	Gadus_morhua
ENSPKIG00000025502	UPF2	100	83.320	ENSGALG00000033772	UPF2	100	83.164	Gallus_gallus
ENSPKIG00000025502	UPF2	100	85.781	ENSGAFG00000020867	UPF2	100	87.188	Gambusia_affinis
ENSPKIG00000025502	UPF2	90	88.007	ENSGACG00000001080	UPF2	100	86.760	Gasterosteus_aculeatus
ENSPKIG00000025502	UPF2	100	81.279	ENSGAGG00000002700	UPF2	100	82.215	Gopherus_agassizii
ENSPKIG00000025502	UPF2	100	82.073	ENSGGOG00000001479	UPF2	100	80.811	Gorilla_gorilla
ENSPKIG00000025502	UPF2	100	86.729	ENSHBUG00000004249	UPF2	100	88.428	Haplochromis_burtoni
ENSPKIG00000025502	UPF2	99	71.819	ENSHGLG00000003822	-	99	71.194	Heterocephalus_glaber_female
ENSPKIG00000025502	UPF2	100	79.875	ENSHGLG00000015176	-	100	80.889	Heterocephalus_glaber_female
ENSPKIG00000025502	UPF2	87	84.375	ENSHGLG00100010036	UPF2	89	84.018	Heterocephalus_glaber_male
ENSPKIG00000025502	UPF2	100	84.992	ENSHCOG00000004025	UPF2	99	85.016	Hippocampus_comes
ENSPKIG00000025502	UPF2	100	84.633	ENSIPUG00000015524	UPF2	100	85.101	Ictalurus_punctatus
ENSPKIG00000025502	UPF2	100	80.967	ENSSTOG00000013075	UPF2	100	79.719	Ictidomys_tridecemlineatus
ENSPKIG00000025502	UPF2	100	79.563	ENSJJAG00000004913	Upf2	100	79.251	Jaculus_jaculus
ENSPKIG00000025502	UPF2	99	86.353	ENSKMAG00000001071	UPF2	100	87.765	Kryptolebias_marmoratus
ENSPKIG00000025502	UPF2	100	86.293	ENSLBEG00000016394	-	99	87.617	Labrus_bergylta
ENSPKIG00000025502	UPF2	79	84.661	ENSLBEG00000000728	-	93	86.332	Labrus_bergylta
ENSPKIG00000025502	UPF2	99	76.172	ENSLACG00000015945	UPF2	99	76.641	Latimeria_chalumnae
ENSPKIG00000025502	UPF2	99	87.795	ENSLOCG00000015698	UPF2	100	89.291	Lepisosteus_oculatus
ENSPKIG00000025502	UPF2	100	82.073	ENSMFAG00000043865	UPF2	100	80.811	Macaca_fascicularis
ENSPKIG00000025502	UPF2	100	82.073	ENSMMUG00000008241	UPF2	100	80.811	Macaca_mulatta
ENSPKIG00000025502	UPF2	80	82.039	ENSMNEG00000008062	UPF2	99	80.661	Macaca_nemestrina
ENSPKIG00000025502	UPF2	99	80.109	ENSMLEG00000036120	UPF2	100	78.750	Mandrillus_leucophaeus
ENSPKIG00000025502	UPF2	100	87.763	ENSMAMG00000018276	UPF2	100	87.704	Mastacembelus_armatus
ENSPKIG00000025502	UPF2	100	86.885	ENSMZEG00005021595	UPF2	100	88.447	Maylandia_zebra
ENSPKIG00000025502	UPF2	99	82.081	ENSMGAG00000004573	UPF2	99	82.864	Meleagris_gallopavo
ENSPKIG00000025502	UPF2	100	79.001	ENSMAUG00000016512	Upf2	100	79.313	Mesocricetus_auratus
ENSPKIG00000025502	UPF2	95	85.787	ENSMICG00000001716	UPF2	99	85.714	Microcebus_murinus
ENSPKIG00000025502	UPF2	100	80.484	ENSMOCG00000008263	Upf2	100	80.562	Microtus_ochrogaster
ENSPKIG00000025502	UPF2	99	82.629	ENSMMOG00000006528	UPF2	100	81.761	Mola_mola
ENSPKIG00000025502	UPF2	91	85.372	ENSMODG00000016794	UPF2	100	80.811	Monodelphis_domestica
ENSPKIG00000025502	UPF2	99	86.552	ENSMALG00000002663	UPF2	100	86.573	Monopterus_albus
ENSPKIG00000025502	UPF2	100	82.045	MGP_CAROLIEiJ_G0023157	Upf2	99	84.087	Mus_caroli
ENSPKIG00000025502	UPF2	100	82.123	ENSMUSG00000043241	Upf2	99	82.453	Mus_musculus
ENSPKIG00000025502	UPF2	100	81.187	MGP_PahariEiJ_G0019217	Upf2	100	82.453	Mus_pahari
ENSPKIG00000025502	UPF2	100	82.358	MGP_SPRETEiJ_G0024075	Upf2	100	82.453	Mus_spretus
ENSPKIG00000025502	UPF2	100	81.123	ENSMPUG00000001064	UPF2	100	81.981	Mustela_putorius_furo
ENSPKIG00000025502	UPF2	99	80.763	ENSMLUG00000000228	UPF2	100	79.984	Myotis_lucifugus
ENSPKIG00000025502	UPF2	100	86.885	ENSNBRG00000013629	UPF2	100	88.447	Neolamprologus_brichardi
ENSPKIG00000025502	UPF2	100	81.917	ENSNLEG00000012058	UPF2	100	80.655	Nomascus_leucogenys
ENSPKIG00000025502	UPF2	72	91.549	ENSOPRG00000006801	-	73	91.549	Ochotona_princeps
ENSPKIG00000025502	UPF2	100	79.875	ENSODEG00000001290	UPF2	100	80.811	Octodon_degus
ENSPKIG00000025502	UPF2	100	86.651	ENSONIG00000017991	UPF2	100	88.212	Oreochromis_niloticus
ENSPKIG00000025502	UPF2	99	80.109	ENSOCUG00000006230	UPF2	100	80.808	Oryctolagus_cuniculus
ENSPKIG00000025502	UPF2	100	86.739	ENSORLG00000017189	UPF2	100	86.817	Oryzias_latipes
ENSPKIG00000025502	UPF2	100	86.817	ENSORLG00020005969	UPF2	100	86.895	Oryzias_latipes_hni
ENSPKIG00000025502	UPF2	100	86.817	ENSORLG00015005713	UPF2	100	86.895	Oryzias_latipes_hsok
ENSPKIG00000025502	UPF2	99	83.503	ENSOMEG00000023420	UPF2	98	83.503	Oryzias_melastigma
ENSPKIG00000025502	UPF2	100	81.981	ENSOGAG00000005796	UPF2	100	80.031	Otolemur_garnettii
ENSPKIG00000025502	UPF2	100	80.997	ENSOARG00000014587	UPF2	100	80.296	Ovis_aries
ENSPKIG00000025502	UPF2	99	79.641	ENSPPAG00000037953	UPF2	100	78.438	Pan_paniscus
ENSPKIG00000025502	UPF2	100	81.201	ENSPPRG00000000690	UPF2	100	82.137	Panthera_pardus
ENSPKIG00000025502	UPF2	100	81.201	ENSPTIG00000008867	UPF2	100	82.137	Panthera_tigris_altaica
ENSPKIG00000025502	UPF2	100	82.073	ENSPTRG00000002291	UPF2	100	80.811	Pan_troglodytes
ENSPKIG00000025502	UPF2	100	82.073	ENSPANG00000023399	UPF2	100	80.811	Papio_anubis
ENSPKIG00000025502	UPF2	59	79.578	ENSPSIG00000015158	UPF2	95	81.423	Pelodiscus_sinensis
ENSPKIG00000025502	UPF2	99	83.777	ENSPMGG00000005259	UPF2	100	84.886	Periophthalmus_magnuspinnatus
ENSPKIG00000025502	UPF2	93	70.630	ENSPEMG00000015731	Upf2	99	69.524	Peromyscus_maniculatus_bairdii
ENSPKIG00000025502	UPF2	100	81.669	ENSPCIG00000006656	UPF2	100	81.045	Phascolarctos_cinereus
ENSPKIG00000025502	UPF2	100	86.172	ENSPFOG00000017118	UPF2	100	87.578	Poecilia_formosa
ENSPKIG00000025502	UPF2	100	86.172	ENSPLAG00000005094	UPF2	100	87.578	Poecilia_latipinna
ENSPKIG00000025502	UPF2	100	86.172	ENSPMEG00000017009	UPF2	100	87.656	Poecilia_mexicana
ENSPKIG00000025502	UPF2	99	85.603	ENSPREG00000021880	UPF2	100	87.089	Poecilia_reticulata
ENSPKIG00000025502	UPF2	66	84.223	ENSPPYG00000002089	-	100	83.986	Pongo_abelii
ENSPKIG00000025502	UPF2	100	69.813	ENSPCAG00000000684	UPF2	86	75.365	Procavia_capensis
ENSPKIG00000025502	UPF2	100	74.903	ENSPVAG00000017286	UPF2	100	74.201	Pteropus_vampyrus
ENSPKIG00000025502	UPF2	99	84.363	ENSPNYG00000017096	UPF2	100	85.927	Pundamilia_nyererei
ENSPKIG00000025502	UPF2	100	88.456	ENSPNAG00000009357	UPF2	100	87.910	Pygocentrus_nattereri
ENSPKIG00000025502	UPF2	99	76.881	ENSRNOG00000023593	Upf2	100	93.333	Rattus_norvegicus
ENSPKIG00000025502	UPF2	99	80.938	ENSRBIG00000037780	UPF2	100	78.984	Rhinopithecus_bieti
ENSPKIG00000025502	UPF2	100	81.917	ENSRROG00000043547	UPF2	100	80.031	Rhinopithecus_roxellana
ENSPKIG00000025502	UPF2	100	81.591	ENSSBOG00000020012	UPF2	100	80.889	Saimiri_boliviensis_boliviensis
ENSPKIG00000025502	UPF2	91	93.718	ENSSFOG00015023788	upf2	100	89.548	Scleropages_formosus
ENSPKIG00000025502	UPF2	90	87.771	ENSSMAG00000007637	UPF2	100	85.803	Scophthalmus_maximus
ENSPKIG00000025502	UPF2	100	86.651	ENSSDUG00000017244	UPF2	99	87.997	Seriola_dumerili
ENSPKIG00000025502	UPF2	99	83.268	ENSSLDG00000016866	UPF2	100	84.465	Seriola_lalandi_dorsalis
ENSPKIG00000025502	UPF2	100	81.123	ENSSARG00000008615	UPF2	100	81.201	Sorex_araneus
ENSPKIG00000025502	UPF2	94	86.517	ENSSPUG00000014544	UPF2	99	80.172	Sphenodon_punctatus
ENSPKIG00000025502	UPF2	68	83.886	ENSSSCG00000011117	-	99	83.657	Sus_scrofa
ENSPKIG00000025502	UPF2	99	82.408	ENSTGUG00000002163	-	100	83.268	Taeniopygia_guttata
ENSPKIG00000025502	UPF2	100	85.469	ENSTRUG00000007519	UPF2	99	86.875	Takifugu_rubripes
ENSPKIG00000025502	UPF2	100	83.463	ENSTNIG00000004453	UPF2	100	83.073	Tetraodon_nigroviridis
ENSPKIG00000025502	UPF2	93	74.727	ENSTBEG00000012679	UPF2	93	72.628	Tupaia_belangeri
ENSPKIG00000025502	UPF2	100	80.343	ENSTTRG00000016388	UPF2	100	80.967	Tursiops_truncatus
ENSPKIG00000025502	UPF2	87	93.258	ENSUAMG00000023560	UPF2	98	93.258	Ursus_americanus
ENSPKIG00000025502	UPF2	100	81.201	ENSUMAG00000012953	UPF2	95	82.059	Ursus_maritimus
ENSPKIG00000025502	UPF2	82	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSPKIG00000025502	UPF2	100	81.201	ENSVVUG00000006166	UPF2	100	82.137	Vulpes_vulpes
ENSPKIG00000025502	UPF2	100	79.875	ENSXETG00000033103	UPF2	91	82.358	Xenopus_tropicalis
ENSPKIG00000025502	UPF2	99	86.072	ENSXCOG00000011604	UPF2	100	87.480	Xiphophorus_couchianus
ENSPKIG00000025502	UPF2	100	86.094	ENSXMAG00000017209	UPF2	100	87.500	Xiphophorus_maculatus