EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000025526 (Gene tree)
Gene ID: 111842456
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8639 bases
Position: chrPGUA01000092.1:1763984-1772622
Accession: 111842456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011069	RRM_1	PF00076.22	3.1e-06	1	1
ENSPKIP00000011067	RRM_1	PF00076.22	3.5e-06	1	1
ENSPKIP00000011066	RRM_1	PF00076.22	3.7e-06	1	1
ENSPKIP00000011068	RRM_1	PF00076.22	3.7e-06	1	1
ENSPKIP00000011069	G-patch	PF01585.23	1.1e-12	1	1
ENSPKIP00000011067	G-patch	PF01585.23	1.2e-12	1	1
ENSPKIP00000011066	G-patch	PF01585.23	1.2e-12	1	1
ENSPKIP00000011068	G-patch	PF01585.23	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000035208	-	3421	-	ENSPKIP00000011068	445 (aa)	-	-
ENSPKIT00000035209	-	1212	-	ENSPKIP00000011069	403 (aa)	-	-
ENSPKIT00000035206	-	4031	-	ENSPKIP00000011066	442 (aa)	-	-
ENSPKIT00000035207	-	3517	-	ENSPKIP00000011067	426 (aa)	XP_023664856	UPI000CD61D3C

Gene Model

Click here to download ENSPKIG00000025526's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000025526	rbm17	100	82.243	ENSPKIG00000005048	-	100	82.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025526	rbm17	100	80.047	ENSG00000134453	RBM17	100	80.235	Homo_sapiens
ENSPKIG00000025526	rbm17	99	81.797	ENSAPOG00000007101	rbm17	99	82.227	Acanthochromis_polyacanthus
ENSPKIG00000025526	rbm17	100	80.516	ENSAMEG00000002107	RBM17	100	80.706	Ailuropoda_melanoleuca
ENSPKIG00000025526	rbm17	100	78.133	ENSACIG00000006251	rbm17	100	80.882	Amphilophus_citrinellus
ENSPKIG00000025526	rbm17	100	81.733	ENSAOCG00000014892	rbm17	100	82.160	Amphiprion_ocellaris
ENSPKIG00000025526	rbm17	100	81.733	ENSAPEG00000022779	rbm17	100	82.160	Amphiprion_percula
ENSPKIG00000025526	rbm17	100	81.499	ENSATEG00000004406	rbm17	100	81.925	Anabas_testudineus
ENSPKIG00000025526	rbm17	100	80.282	ENSAPLG00000004190	RBM17	100	80.282	Anas_platyrhynchos
ENSPKIG00000025526	rbm17	90	75.897	ENSACAG00000005418	RBM17	99	76.350	Anolis_carolinensis
ENSPKIG00000025526	rbm17	100	73.449	ENSANAG00000019330	-	95	84.956	Aotus_nancymaae
ENSPKIG00000025526	rbm17	100	80.516	ENSANAG00000030127	RBM17	94	88.793	Aotus_nancymaae
ENSPKIG00000025526	rbm17	100	77.641	ENSACLG00000003928	rbm17	100	79.412	Astatotilapia_calliptera
ENSPKIG00000025526	rbm17	100	82.629	ENSAMXG00000005853	rbm17	100	82.629	Astyanax_mexicanus
ENSPKIG00000025526	rbm17	100	78.638	ENSBTAG00000011094	-	100	78.824	Bos_taurus
ENSPKIG00000025526	rbm17	100	80.047	ENSBTAG00000021951	RBM17	100	80.235	Bos_taurus
ENSPKIG00000025526	rbm17	100	80.516	ENSCJAG00000020573	RBM17	100	80.706	Callithrix_jacchus
ENSPKIG00000025526	rbm17	100	80.516	ENSCAFG00000005206	RBM17	100	80.706	Canis_familiaris
ENSPKIG00000025526	rbm17	100	79.115	ENSCAFG00020005420	RBM17	100	79.115	Canis_lupus_dingo
ENSPKIG00000025526	rbm17	100	80.047	ENSCHIG00000023204	-	100	80.235	Capra_hircus
ENSPKIG00000025526	rbm17	100	78.378	ENSCHIG00000019921	-	100	78.378	Capra_hircus
ENSPKIG00000025526	rbm17	100	80.282	ENSTSYG00000001165	RBM17	97	88.696	Carlito_syrichta
ENSPKIG00000025526	rbm17	90	68.919	ENSCAPG00000006275	RBM17	100	68.378	Cavia_aperea
ENSPKIG00000025526	rbm17	100	78.293	ENSCPOG00000005679	RBM17	100	78.537	Cavia_porcellus
ENSPKIG00000025526	rbm17	100	80.516	ENSCCAG00000018655	RBM17	94	88.793	Cebus_capucinus
ENSPKIG00000025526	rbm17	100	80.047	ENSCATG00000041566	RBM17	94	88.793	Cercocebus_atys
ENSPKIG00000025526	rbm17	100	80.516	ENSCLAG00000012195	RBM17	100	80.751	Chinchilla_lanigera
ENSPKIG00000025526	rbm17	100	80.047	ENSCSAG00000013564	RBM17	100	80.235	Chlorocebus_sabaeus
ENSPKIG00000025526	rbm17	93	63.291	ENSCHOG00000005131	RBM17	100	63.452	Choloepus_hoffmanni
ENSPKIG00000025526	rbm17	100	78.638	ENSCPBG00000019836	RBM17	100	79.059	Chrysemys_picta_bellii
ENSPKIG00000025526	rbm17	100	43.750	ENSCSAVG00000008782	-	100	43.852	Ciona_savignyi
ENSPKIG00000025526	rbm17	100	79.812	ENSCANG00000030987	RBM17	94	88.793	Colobus_angolensis_palliatus
ENSPKIG00000025526	rbm17	98	70.673	ENSCANG00000023715	-	99	70.843	Colobus_angolensis_palliatus
ENSPKIG00000025526	rbm17	100	62.439	ENSCGRG00001009256	-	100	62.353	Cricetulus_griseus_chok1gshd
ENSPKIG00000025526	rbm17	100	80.751	ENSCGRG00001013842	Rbm17	100	80.941	Cricetulus_griseus_chok1gshd
ENSPKIG00000025526	rbm17	100	80.751	ENSCGRG00000006907	Rbm17	100	80.941	Cricetulus_griseus_crigri
ENSPKIG00000025526	rbm17	100	79.350	ENSCSEG00000018164	rbm17	100	79.767	Cynoglossus_semilaevis
ENSPKIG00000025526	rbm17	100	75.430	ENSCVAG00000002476	rbm17	100	77.262	Cyprinodon_variegatus
ENSPKIG00000025526	rbm17	100	77.880	ENSDARG00000031346	rbm17	100	80.653	Danio_rerio
ENSPKIG00000025526	rbm17	100	80.282	ENSDNOG00000035920	RBM17	100	80.471	Dasypus_novemcinctus
ENSPKIG00000025526	rbm17	99	35.931	FBgn0086683	Spf45	99	35.853	Drosophila_melanogaster
ENSPKIG00000025526	rbm17	85	82.547	ENSETEG00000006642	RBM17	86	82.547	Echinops_telfairi
ENSPKIG00000025526	rbm17	70	57.143	ENSEBUG00000010253	rbm17	93	57.143	Eptatretus_burgeri
ENSPKIG00000025526	rbm17	100	78.345	ENSEASG00005019205	-	100	78.345	Equus_asinus_asinus
ENSPKIG00000025526	rbm17	93	76.962	ENSEASG00005009236	-	100	77.157	Equus_asinus_asinus
ENSPKIG00000025526	rbm17	100	71.744	ENSECAG00000001379	-	100	71.744	Equus_caballus
ENSPKIG00000025526	rbm17	100	71.960	ENSECAG00000008939	RBM17	100	73.449	Equus_caballus
ENSPKIG00000025526	rbm17	86	64.286	ENSEEUG00000013077	RBM17	100	64.130	Erinaceus_europaeus
ENSPKIG00000025526	rbm17	100	80.370	ENSELUG00000006440	rbm17	100	80.370	Esox_lucius
ENSPKIG00000025526	rbm17	100	80.516	ENSFCAG00000031988	RBM17	100	80.706	Felis_catus
ENSPKIG00000025526	rbm17	100	79.577	ENSFALG00000001790	RBM17	100	79.765	Ficedula_albicollis
ENSPKIG00000025526	rbm17	100	80.516	ENSFDAG00000007470	RBM17	100	80.706	Fukomys_damarensis
ENSPKIG00000025526	rbm17	100	77.986	ENSFHEG00000001266	rbm17	100	78.886	Fundulus_heteroclitus
ENSPKIG00000025526	rbm17	99	76.056	ENSGMOG00000008438	rbm17	100	76.471	Gadus_morhua
ENSPKIG00000025526	rbm17	100	80.282	ENSGALG00000006332	RBM17	100	80.471	Gallus_gallus
ENSPKIG00000025526	rbm17	100	77.752	ENSGAFG00000019879	rbm17	100	79.577	Gambusia_affinis
ENSPKIG00000025526	rbm17	99	79.859	ENSGACG00000019174	rbm17	99	79.859	Gasterosteus_aculeatus
ENSPKIG00000025526	rbm17	100	78.638	ENSGAGG00000019906	RBM17	100	79.059	Gopherus_agassizii
ENSPKIG00000025526	rbm17	100	80.328	ENSHBUG00000016624	rbm17	100	80.751	Haplochromis_burtoni
ENSPKIG00000025526	rbm17	100	80.516	ENSHGLG00000011580	RBM17	100	80.706	Heterocephalus_glaber_female
ENSPKIG00000025526	rbm17	100	63.850	ENSHGLG00100010556	-	100	64.000	Heterocephalus_glaber_male
ENSPKIG00000025526	rbm17	100	80.516	ENSHGLG00100010460	RBM17	100	80.706	Heterocephalus_glaber_male
ENSPKIG00000025526	rbm17	99	80.000	ENSHCOG00000010865	rbm17	100	80.233	Hippocampus_comes
ENSPKIG00000025526	rbm17	100	76.977	ENSIPUG00000007699	Rbm17	100	83.063	Ictalurus_punctatus
ENSPKIG00000025526	rbm17	100	80.751	ENSSTOG00000013591	RBM17	100	80.941	Ictidomys_tridecemlineatus
ENSPKIG00000025526	rbm17	100	57.494	ENSJJAG00000000993	-	100	57.143	Jaculus_jaculus
ENSPKIG00000025526	rbm17	100	80.751	ENSJJAG00000022886	Rbm17	100	80.941	Jaculus_jaculus
ENSPKIG00000025526	rbm17	100	78.454	ENSKMAG00000021400	rbm17	100	80.094	Kryptolebias_marmoratus
ENSPKIG00000025526	rbm17	100	81.250	ENSLBEG00000000881	rbm17	100	81.439	Labrus_bergylta
ENSPKIG00000025526	rbm17	99	65.581	ENSLACG00000017297	RBM17	99	65.429	Latimeria_chalumnae
ENSPKIG00000025526	rbm17	100	83.916	ENSLOCG00000015659	rbm17	100	83.916	Lepisosteus_oculatus
ENSPKIG00000025526	rbm17	100	80.751	ENSLAFG00000011629	RBM17	100	80.941	Loxodonta_africana
ENSPKIG00000025526	rbm17	100	80.047	ENSMFAG00000035521	RBM17	94	88.793	Macaca_fascicularis
ENSPKIG00000025526	rbm17	100	80.047	ENSMMUG00000015152	RBM17	94	88.793	Macaca_mulatta
ENSPKIG00000025526	rbm17	100	80.047	ENSMNEG00000017264	RBM17	94	88.793	Macaca_nemestrina
ENSPKIG00000025526	rbm17	100	80.047	ENSMLEG00000029340	RBM17	94	88.793	Mandrillus_leucophaeus
ENSPKIG00000025526	rbm17	100	79.157	ENSMAMG00000000387	rbm17	100	79.630	Mastacembelus_armatus
ENSPKIG00000025526	rbm17	100	80.328	ENSMZEG00005015179	rbm17	100	80.751	Maylandia_zebra
ENSPKIG00000025526	rbm17	100	80.607	ENSMGAG00000003981	RBM17	100	80.607	Meleagris_gallopavo
ENSPKIG00000025526	rbm17	100	80.751	ENSMAUG00000019247	Rbm17	100	80.941	Mesocricetus_auratus
ENSPKIG00000025526	rbm17	100	74.941	ENSMICG00000041489	-	100	75.117	Microcebus_murinus
ENSPKIG00000025526	rbm17	100	81.221	ENSMICG00000003976	-	100	81.412	Microcebus_murinus
ENSPKIG00000025526	rbm17	100	80.751	ENSMOCG00000011847	Rbm17	100	80.941	Microtus_ochrogaster
ENSPKIG00000025526	rbm17	93	65.000	ENSMOCG00000014517	-	99	65.789	Microtus_ochrogaster
ENSPKIG00000025526	rbm17	100	75.430	ENSMMOG00000010264	rbm17	100	75.430	Mola_mola
ENSPKIG00000025526	rbm17	100	79.343	ENSMODG00000016648	RBM17	100	79.529	Monodelphis_domestica
ENSPKIG00000025526	rbm17	100	81.308	ENSMALG00000010597	rbm17	100	81.524	Monopterus_albus
ENSPKIG00000025526	rbm17	100	80.516	MGP_CAROLIEiJ_G0023173	Rbm17	100	80.941	Mus_caroli
ENSPKIG00000025526	rbm17	100	80.516	ENSMUSG00000037197	Rbm17	100	80.941	Mus_musculus
ENSPKIG00000025526	rbm17	100	80.516	MGP_PahariEiJ_G0019233	Rbm17	100	80.706	Mus_pahari
ENSPKIG00000025526	rbm17	100	80.516	MGP_SPRETEiJ_G0024091	Rbm17	100	80.941	Mus_spretus
ENSPKIG00000025526	rbm17	87	78.862	ENSMPUG00000016359	RBM17	96	79.076	Mustela_putorius_furo
ENSPKIG00000025526	rbm17	100	78.923	ENSMLUG00000002302	-	100	79.108	Myotis_lucifugus
ENSPKIG00000025526	rbm17	100	76.995	ENSMLUG00000025709	-	100	77.176	Myotis_lucifugus
ENSPKIG00000025526	rbm17	100	55.911	ENSNGAG00000000663	-	100	55.283	Nannospalax_galili
ENSPKIG00000025526	rbm17	100	80.751	ENSNGAG00000000741	Rbm17	100	80.941	Nannospalax_galili
ENSPKIG00000025526	rbm17	100	75.184	ENSNBRG00000018148	rbm17	100	77.451	Neolamprologus_brichardi
ENSPKIG00000025526	rbm17	100	80.047	ENSNLEG00000033350	RBM17	94	88.793	Nomascus_leucogenys
ENSPKIG00000025526	rbm17	100	74.413	ENSMEUG00000011347	RBM17	100	74.588	Notamacropus_eugenii
ENSPKIG00000025526	rbm17	100	70.000	ENSOPRG00000002993	RBM17	100	70.118	Ochotona_princeps
ENSPKIG00000025526	rbm17	97	61.594	ENSODEG00000007286	-	99	61.743	Octodon_degus
ENSPKIG00000025526	rbm17	100	80.328	ENSODEG00000004393	RBM17	100	80.516	Octodon_degus
ENSPKIG00000025526	rbm17	100	80.562	ENSONIG00000011838	rbm17	100	80.986	Oreochromis_niloticus
ENSPKIG00000025526	rbm17	100	79.108	ENSOANG00000015455	RBM17	100	79.529	Ornithorhynchus_anatinus
ENSPKIG00000025526	rbm17	100	79.391	ENSORLG00000028798	rbm17	100	79.625	Oryzias_latipes
ENSPKIG00000025526	rbm17	100	79.625	ENSORLG00020004593	rbm17	100	77.941	Oryzias_latipes_hni
ENSPKIG00000025526	rbm17	100	79.625	ENSORLG00015000033	rbm17	100	78.873	Oryzias_latipes_hsok
ENSPKIG00000025526	rbm17	100	79.859	ENSOMEG00000012060	rbm17	100	83.851	Oryzias_melastigma
ENSPKIG00000025526	rbm17	100	80.986	ENSOGAG00000015687	RBM17	100	81.176	Otolemur_garnettii
ENSPKIG00000025526	rbm17	100	80.047	ENSOARG00000012975	RBM17	100	80.235	Ovis_aries
ENSPKIG00000025526	rbm17	100	80.047	ENSPPAG00000032347	RBM17	94	88.793	Pan_paniscus
ENSPKIG00000025526	rbm17	100	80.516	ENSPPRG00000010706	RBM17	100	80.706	Panthera_pardus
ENSPKIG00000025526	rbm17	100	80.516	ENSPTIG00000007596	RBM17	100	80.706	Panthera_tigris_altaica
ENSPKIG00000025526	rbm17	100	80.047	ENSPTRG00000002265	RBM17	94	88.793	Pan_troglodytes
ENSPKIG00000025526	rbm17	100	80.047	ENSPANG00000023425	RBM17	94	88.793	Papio_anubis
ENSPKIG00000025526	rbm17	100	78.322	ENSPSIG00000012332	RBM17	100	78.505	Pelodiscus_sinensis
ENSPKIG00000025526	rbm17	100	76.471	ENSPMGG00000007980	rbm17	100	79.218	Periophthalmus_magnuspinnatus
ENSPKIG00000025526	rbm17	100	80.751	ENSPEMG00000014320	Rbm17	100	80.941	Peromyscus_maniculatus_bairdii
ENSPKIG00000025526	rbm17	100	78.972	ENSPCIG00000019260	-	100	79.157	Phascolarctos_cinereus
ENSPKIG00000025526	rbm17	100	80.328	ENSPFOG00000013271	rbm17	100	81.967	Poecilia_formosa
ENSPKIG00000025526	rbm17	100	80.094	ENSPLAG00000004455	rbm17	100	81.733	Poecilia_latipinna
ENSPKIG00000025526	rbm17	100	80.328	ENSPMEG00000014864	rbm17	100	81.967	Poecilia_mexicana
ENSPKIG00000025526	rbm17	100	78.923	ENSPREG00000015589	rbm17	100	80.986	Poecilia_reticulata
ENSPKIG00000025526	rbm17	82	58.333	ENSPPYG00000019042	-	100	58.790	Pongo_abelii
ENSPKIG00000025526	rbm17	99	61.085	ENSPPYG00000019881	-	100	61.229	Pongo_abelii
ENSPKIG00000025526	rbm17	100	80.047	ENSPPYG00000002067	RBM17	100	80.235	Pongo_abelii
ENSPKIG00000025526	rbm17	100	73.005	ENSPCAG00000016879	RBM17	100	73.176	Procavia_capensis
ENSPKIG00000025526	rbm17	100	80.516	ENSPCOG00000027881	RBM17	100	80.706	Propithecus_coquereli
ENSPKIG00000025526	rbm17	100	72.300	ENSPVAG00000015499	RBM17	100	72.471	Pteropus_vampyrus
ENSPKIG00000025526	rbm17	100	72.482	ENSPNYG00000015274	rbm17	100	73.171	Pundamilia_nyererei
ENSPKIG00000025526	rbm17	100	82.864	ENSPNAG00000030046	rbm17	100	82.864	Pygocentrus_nattereri
ENSPKIG00000025526	rbm17	100	80.751	ENSRNOG00000018767	Rbm17	100	80.941	Rattus_norvegicus
ENSPKIG00000025526	rbm17	100	80.047	ENSRBIG00000043727	RBM17	94	88.793	Rhinopithecus_bieti
ENSPKIG00000025526	rbm17	100	80.047	ENSRROG00000044142	RBM17	94	88.793	Rhinopithecus_roxellana
ENSPKIG00000025526	rbm17	100	71.831	ENSSBOG00000023653	-	100	72.235	Saimiri_boliviensis_boliviensis
ENSPKIG00000025526	rbm17	100	80.516	ENSSBOG00000031661	-	93	88.696	Saimiri_boliviensis_boliviensis
ENSPKIG00000025526	rbm17	100	79.812	ENSSHAG00000012480	-	100	80.000	Sarcophilus_harrisii
ENSPKIG00000025526	rbm17	100	84.038	ENSSFOG00015009892	rbm17	100	84.235	Scleropages_formosus
ENSPKIG00000025526	rbm17	100	77.931	ENSSMAG00000012368	rbm17	100	78.341	Scophthalmus_maximus
ENSPKIG00000025526	rbm17	100	79.902	ENSSDUG00000015015	rbm17	100	81.007	Seriola_dumerili
ENSPKIG00000025526	rbm17	100	79.902	ENSSLDG00000014486	rbm17	100	81.007	Seriola_lalandi_dorsalis
ENSPKIG00000025526	rbm17	61	62.069	ENSSARG00000001792	-	100	62.308	Sorex_araneus
ENSPKIG00000025526	rbm17	99	79.765	ENSSPUG00000001036	RBM17	99	80.189	Sphenodon_punctatus
ENSPKIG00000025526	rbm17	100	81.967	ENSSPAG00000002338	rbm17	100	82.394	Stegastes_partitus
ENSPKIG00000025526	rbm17	100	79.812	ENSSSCG00000011134	RBM17	100	80.000	Sus_scrofa
ENSPKIG00000025526	rbm17	100	79.812	ENSTGUG00000002013	RBM17	100	80.471	Taeniopygia_guttata
ENSPKIG00000025526	rbm17	100	80.796	ENSTRUG00000010698	rbm17	100	80.796	Takifugu_rubripes
ENSPKIG00000025526	rbm17	100	81.967	ENSTNIG00000006892	rbm17	100	81.967	Tetraodon_nigroviridis
ENSPKIG00000025526	rbm17	86	93.939	ENSTBEG00000014686	RBM17	85	93.939	Tupaia_belangeri
ENSPKIG00000025526	rbm17	90	78.442	ENSTTRG00000001344	RBM17	100	78.646	Tursiops_truncatus
ENSPKIG00000025526	rbm17	100	79.361	ENSUAMG00000009499	RBM17	100	79.361	Ursus_americanus
ENSPKIG00000025526	rbm17	100	80.516	ENSUMAG00000012237	RBM17	100	80.706	Ursus_maritimus
ENSPKIG00000025526	rbm17	100	69.484	ENSVPAG00000005497	RBM17	100	69.647	Vicugna_pacos
ENSPKIG00000025526	rbm17	100	79.115	ENSVVUG00000006780	RBM17	100	79.115	Vulpes_vulpes
ENSPKIG00000025526	rbm17	99	76.179	ENSXETG00000018123	rbm17	100	77.069	Xenopus_tropicalis
ENSPKIG00000025526	rbm17	100	79.625	ENSXMAG00000008674	rbm17	100	81.690	Xiphophorus_maculatus