EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000025605 (Gene tree)
Gene ID: 111847583
Gene Symbol: larp6b
Alias: -
Full Name: la-related protein 6-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 2269 bases
Position: chrPGUA01000018.1:589562-591830
Accession: 111847583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000012048	La	PF05383.17	4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000036431	-	1985	-	ENSPKIP00000012048	482 (aa)	XP_023674682	UPI000CD650FF

Gene Model

Click here to download ENSPKIG00000025605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000025605	larp6b	84	40.898	ENSPKIG00000004511	LARP6	62	41.218
ENSPKIG00000025605	larp6b	84	40.515	ENSPKIG00000020103	larp6a	79	39.817

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025605	larp6b	82	37.879	ENSAPOG00000003568	-	89	37.879	Acanthochromis_polyacanthus
ENSPKIG00000025605	larp6b	82	39.506	ENSAOCG00000004646	larp6b	88	39.506	Amphiprion_ocellaris
ENSPKIG00000025605	larp6b	82	38.710	ENSAPEG00000022748	-	87	38.765	Amphiprion_percula
ENSPKIG00000025605	larp6b	84	39.461	ENSATEG00000021222	-	89	39.163	Anabas_testudineus
ENSPKIG00000025605	larp6b	97	56.250	ENSAMXG00000018956	larp6b	99	56.452	Astyanax_mexicanus
ENSPKIG00000025605	larp6b	87	33.259	ENSCING00000008613	-	85	33.784	Ciona_intestinalis
ENSPKIG00000025605	larp6b	53	36.434	ENSCSAVG00000011718	-	80	38.655	Ciona_savignyi
ENSPKIG00000025605	larp6b	92	58.850	ENSDARG00000003968	larp6b	82	70.909	Danio_rerio
ENSPKIG00000025605	larp6b	97	60.124	ENSELUG00000021677	larp6b	99	59.588	Esox_lucius
ENSPKIG00000025605	larp6b	68	39.701	ENSFHEG00000010409	-	62	43.636	Fundulus_heteroclitus
ENSPKIG00000025605	larp6b	97	56.289	ENSIPUG00000007609	larp6b	99	56.495	Ictalurus_punctatus
ENSPKIG00000025605	larp6b	84	38.575	ENSMAMG00000005509	-	87	38.725	Mastacembelus_armatus
ENSPKIG00000025605	larp6b	50	46.429	ENSPLAG00000005133	-	52	53.158	Poecilia_latipinna
ENSPKIG00000025605	larp6b	97	57.320	ENSPNAG00000023854	larp6b	99	57.113	Pygocentrus_nattereri
ENSPKIG00000025605	larp6b	86	40.288	ENSSLDG00000017081	-	84	40.288	Seriola_lalandi_dorsalis
ENSPKIG00000025605	larp6b	82	39.851	ENSSPAG00000014320	-	85	41.584	Stegastes_partitus
ENSPKIG00000025605	larp6b	82	35.338	ENSXCOG00000018917	-	88	36.250	Xiphophorus_couchianus
ENSPKIG00000025605	larp6b	82	35.338	ENSXMAG00000025734	-	89	36.250	Xiphophorus_maculatus