EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000025635 (Gene tree)
Gene ID: 111846893
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 5984 bases
Position: chrPGUA01000162.1:784967-790950
Accession: 111846893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000011977	SHS2_Rpb7-N	PF03876.17	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000036360	-	2923	-	ENSPKIP00000011977	361 (aa)	XP_023673370	UPI000CD6509E
ENSPKIT00000036358	-	3147	-	ENSPKIP00000011975	368 (aa)	XP_023673369	UPI000CD63963

Gene Model

Click here to download ENSPKIG00000025635's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025635	twistnb	53	61.658	ENSG00000105849	TWISTNB	57	61.658	Homo_sapiens
ENSPKIG00000025635	twistnb	100	47.493	ENSAPOG00000011796	twistnb	66	54.118	Acanthochromis_polyacanthus
ENSPKIG00000025635	twistnb	91	48.214	ENSACIG00000020400	twistnb	58	57.674	Amphilophus_citrinellus
ENSPKIG00000025635	twistnb	69	54.688	ENSAOCG00000024200	twistnb	66	54.688	Amphiprion_ocellaris
ENSPKIG00000025635	twistnb	69	54.297	ENSAPEG00000016750	twistnb	66	54.297	Amphiprion_percula
ENSPKIG00000025635	twistnb	62	60.435	ENSATEG00000017956	twistnb	61	60.435	Anabas_testudineus
ENSPKIG00000025635	twistnb	68	51.587	ENSACLG00000022280	twistnb	80	48.318	Astatotilapia_calliptera
ENSPKIG00000025635	twistnb	60	63.426	ENSAMXG00000035868	twistnb	67	62.332	Astyanax_mexicanus
ENSPKIG00000025635	twistnb	52	61.905	ENSCJAG00000001148	TWISTNB	53	64.045	Callithrix_jacchus
ENSPKIG00000025635	twistnb	59	58.685	ENSCAFG00000002511	TWISTNB	60	58.685	Canis_familiaris
ENSPKIG00000025635	twistnb	59	58.685	ENSCAFG00020002140	TWISTNB	57	58.685	Canis_lupus_dingo
ENSPKIG00000025635	twistnb	56	59.113	ENSCHIG00000024078	TWISTNB	62	58.252	Capra_hircus
ENSPKIG00000025635	twistnb	62	55.556	ENSTSYG00000001471	TWISTNB	64	55.556	Carlito_syrichta
ENSPKIG00000025635	twistnb	59	57.477	ENSCPOG00000031651	TWISTNB	55	63.492	Cavia_porcellus
ENSPKIG00000025635	twistnb	52	61.905	ENSCCAG00000026416	TWISTNB	55	61.905	Cebus_capucinus
ENSPKIG00000025635	twistnb	53	60.622	ENSCATG00000035621	TWISTNB	57	60.622	Cercocebus_atys
ENSPKIG00000025635	twistnb	52	62.632	ENSCLAG00000012696	TWISTNB	56	62.632	Chinchilla_lanigera
ENSPKIG00000025635	twistnb	53	60.622	ENSCSAG00000013544	TWISTNB	57	60.622	Chlorocebus_sabaeus
ENSPKIG00000025635	twistnb	53	61.140	ENSCANG00000038759	TWISTNB	57	61.140	Colobus_angolensis_palliatus
ENSPKIG00000025635	twistnb	51	62.162	ENSCGRG00001000499	Twistnb	54	64.246	Cricetulus_griseus_chok1gshd
ENSPKIG00000025635	twistnb	62	57.709	ENSCVAG00000014324	twistnb	60	57.709	Cyprinodon_variegatus
ENSPKIG00000025635	twistnb	53	69.634	ENSDARG00000024416	twistnb	51	67.662	Danio_rerio
ENSPKIG00000025635	twistnb	69	51.406	ENSDNOG00000006438	-	60	57.692	Dasypus_novemcinctus
ENSPKIG00000025635	twistnb	59	58.685	ENSDORG00000007795	Twistnb	64	58.411	Dipodomys_ordii
ENSPKIG00000025635	twistnb	56	58.621	ENSEASG00005021702	TWISTNB	58	58.621	Equus_asinus_asinus
ENSPKIG00000025635	twistnb	99	48.378	ENSELUG00000000098	TWISTNB	63	62.389	Esox_lucius
ENSPKIG00000025635	twistnb	55	60.302	ENSFCAG00000025987	TWISTNB	58	62.176	Felis_catus
ENSPKIG00000025635	twistnb	52	63.492	ENSFDAG00000017368	TWISTNB	64	56.444	Fukomys_damarensis
ENSPKIG00000025635	twistnb	58	61.722	ENSFHEG00000013318	twistnb	55	61.722	Fundulus_heteroclitus
ENSPKIG00000025635	twistnb	64	59.227	ENSGAFG00000018309	twistnb	62	59.471	Gambusia_affinis
ENSPKIG00000025635	twistnb	67	51.653	ENSGACG00000006425	twistnb	75	59.391	Gasterosteus_aculeatus
ENSPKIG00000025635	twistnb	53	61.658	ENSGGOG00000026888	TWISTNB	57	61.658	Gorilla_gorilla
ENSPKIG00000025635	twistnb	67	52.227	ENSHBUG00000020155	twistnb	60	52.227	Haplochromis_burtoni
ENSPKIG00000025635	twistnb	54	61.421	ENSHGLG00000010976	TWISTNB	58	61.421	Heterocephalus_glaber_female
ENSPKIG00000025635	twistnb	54	61.421	ENSHGLG00100005410	TWISTNB	58	61.421	Heterocephalus_glaber_male
ENSPKIG00000025635	twistnb	68	54.400	ENSHCOG00000010590	twistnb	63	53.282	Hippocampus_comes
ENSPKIG00000025635	twistnb	65	58.607	ENSIPUG00000004117	twistnb	64	60.086	Ictalurus_punctatus
ENSPKIG00000025635	twistnb	54	60.204	ENSSTOG00000022702	TWISTNB	61	54.783	Ictidomys_tridecemlineatus
ENSPKIG00000025635	twistnb	51	63.388	ENSKMAG00000001591	twistnb	54	61.692	Kryptolebias_marmoratus
ENSPKIG00000025635	twistnb	69	53.543	ENSLBEG00000024225	twistnb	67	53.543	Labrus_bergylta
ENSPKIG00000025635	twistnb	51	61.957	ENSLACG00000010508	TWISTNB	53	61.957	Latimeria_chalumnae
ENSPKIG00000025635	twistnb	55	68.020	ENSLOCG00000011399	twistnb	70	61.538	Lepisosteus_oculatus
ENSPKIG00000025635	twistnb	55	58.706	ENSLAFG00000008755	TWISTNB	66	54.585	Loxodonta_africana
ENSPKIG00000025635	twistnb	53	60.622	ENSMFAG00000045328	TWISTNB	57	60.622	Macaca_fascicularis
ENSPKIG00000025635	twistnb	53	60.622	ENSMMUG00000009609	TWISTNB	57	60.622	Macaca_mulatta
ENSPKIG00000025635	twistnb	53	59.585	ENSMNEG00000041159	TWISTNB	57	59.585	Macaca_nemestrina
ENSPKIG00000025635	twistnb	53	60.622	ENSMLEG00000042783	TWISTNB	57	60.622	Mandrillus_leucophaeus
ENSPKIG00000025635	twistnb	68	51.587	ENSMZEG00005007561	twistnb	80	48.318	Maylandia_zebra
ENSPKIG00000025635	twistnb	62	56.000	ENSMICG00000036489	TWISTNB	66	56.000	Microcebus_murinus
ENSPKIG00000025635	twistnb	53	61.165	ENSMALG00000016407	twistnb	54	61.165	Monopterus_albus
ENSPKIG00000025635	twistnb	51	61.828	MGP_CAROLIEiJ_G0017692	Twistnb	54	64.246	Mus_caroli
ENSPKIG00000025635	twistnb	51	61.290	ENSMUSG00000020561	Twistnb	62	58.824	Mus_musculus
ENSPKIG00000025635	twistnb	56	56.931	MGP_PahariEiJ_G0029450	Twistnb	60	58.673	Mus_pahari
ENSPKIG00000025635	twistnb	51	61.290	MGP_SPRETEiJ_G0018534	Twistnb	54	63.687	Mus_spretus
ENSPKIG00000025635	twistnb	53	61.658	ENSMPUG00000013948	TWISTNB	54	61.658	Mustela_putorius_furo
ENSPKIG00000025635	twistnb	55	60.101	ENSNGAG00000022455	Twistnb	99	60.101	Nannospalax_galili
ENSPKIG00000025635	twistnb	68	51.984	ENSNBRG00000008652	twistnb	79	48.837	Neolamprologus_brichardi
ENSPKIG00000025635	twistnb	56	58.173	ENSOPRG00000016109	TWISTNB	62	55.814	Ochotona_princeps
ENSPKIG00000025635	twistnb	58	58.411	ENSODEG00000007222	TWISTNB	64	58.411	Octodon_degus
ENSPKIG00000025635	twistnb	54	64.948	ENSORLG00000004005	twistnb	50	63.158	Oryzias_latipes
ENSPKIG00000025635	twistnb	54	64.948	ENSORLG00020002579	twistnb	55	63.158	Oryzias_latipes_hni
ENSPKIG00000025635	twistnb	53	61.658	ENSOGAG00000009189	TWISTNB	64	56.000	Otolemur_garnettii
ENSPKIG00000025635	twistnb	53	61.658	ENSPPAG00000034623	TWISTNB	57	61.658	Pan_paniscus
ENSPKIG00000025635	twistnb	55	60.302	ENSPPRG00000005877	TWISTNB	58	62.176	Panthera_pardus
ENSPKIG00000025635	twistnb	53	61.658	ENSPTRG00000018962	TWISTNB	57	61.658	Pan_troglodytes
ENSPKIG00000025635	twistnb	53	60.622	ENSPANG00000015736	TWISTNB	57	60.622	Papio_anubis
ENSPKIG00000025635	twistnb	95	45.753	ENSPMGG00000019023	twistnb	77	52.381	Periophthalmus_magnuspinnatus
ENSPKIG00000025635	twistnb	76	45.486	ENSPCIG00000017456	TWISTNB	55	58.011	Phascolarctos_cinereus
ENSPKIG00000025635	twistnb	53	61.140	ENSPPYG00000017752	TWISTNB	70	53.814	Pongo_abelii
ENSPKIG00000025635	twistnb	54	61.026	ENSPCOG00000017601	TWISTNB	61	58.294	Propithecus_coquereli
ENSPKIG00000025635	twistnb	52	62.434	ENSPVAG00000015574	TWISTNB	55	62.434	Pteropus_vampyrus
ENSPKIG00000025635	twistnb	68	51.587	ENSPNYG00000002674	twistnb	66	51.587	Pundamilia_nyererei
ENSPKIG00000025635	twistnb	63	60.345	ENSPNAG00000011956	twistnb	59	63.380	Pygocentrus_nattereri
ENSPKIG00000025635	twistnb	55	59.500	ENSRNOG00000010750	Twistnb	69	56.522	Rattus_norvegicus
ENSPKIG00000025635	twistnb	53	61.140	ENSRBIG00000043007	TWISTNB	56	61.140	Rhinopithecus_bieti
ENSPKIG00000025635	twistnb	53	61.140	ENSRROG00000040155	TWISTNB	57	61.140	Rhinopithecus_roxellana
ENSPKIG00000025635	twistnb	52	61.905	ENSSBOG00000023188	TWISTNB	55	61.905	Saimiri_boliviensis_boliviensis
ENSPKIG00000025635	twistnb	83	55.082	ENSSFOG00015012788	twistnb	76	58.635	Scleropages_formosus
ENSPKIG00000025635	twistnb	68	54.980	ENSSMAG00000012792	twistnb	65	54.980	Scophthalmus_maximus
ENSPKIG00000025635	twistnb	62	58.772	ENSSDUG00000007038	twistnb	60	58.772	Seriola_dumerili
ENSPKIG00000025635	twistnb	53	53.125	ENSSPUG00000007595	TWISTNB	56	55.621	Sphenodon_punctatus
ENSPKIG00000025635	twistnb	69	54.762	ENSSPAG00000005871	twistnb	68	54.545	Stegastes_partitus
ENSPKIG00000025635	twistnb	53	62.176	ENSSSCG00000025298	TWISTNB	58	62.176	Sus_scrofa
ENSPKIG00000025635	twistnb	87	44.237	ENSTNIG00000017778	twistnb	53	62.428	Tetraodon_nigroviridis
ENSPKIG00000025635	twistnb	52	63.492	ENSUAMG00000017593	TWISTNB	64	57.919	Ursus_americanus
ENSPKIG00000025635	twistnb	52	62.963	ENSUMAG00000022203	TWISTNB	64	57.466	Ursus_maritimus
ENSPKIG00000025635	twistnb	69	55.118	ENSXCOG00000020199	twistnb	69	57.255	Xiphophorus_couchianus