EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000025681 (Gene tree)
Gene ID: 111846372
Gene Symbol: si:ch211-153b23.4 (1 of many)
Alias: -
Full Name: uncharacterized LOC111846372
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6746 bases
Position: chrPGUA01000156.1:689816-696561
Accession: 111846372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000012059	Sua5_yciO_yrdC	PF01300.18	4.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000036442	-	4190	-	ENSPKIP00000012059	858 (aa)	XP_023672266	UPI000CD625C5

Gene Model

Click here to download ENSPKIG00000025681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000025681's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000025681	si:ch211-153b23.4	98	71.395	ENSPKIG00000014429	si:ch211-153b23.4	97	71.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000025681	si:ch211-153b23.4	98	67.176	ENSAPOG00000006178	si:ch211-153b23.4	97	66.941	Acanthochromis_polyacanthus
ENSPKIG00000025681	si:ch211-153b23.4	91	70.038	ENSAPOG00000006144	si:ch211-153b23.4	92	70.038	Acanthochromis_polyacanthus
ENSPKIG00000025681	si:ch211-153b23.4	95	70.752	ENSACIG00000006997	si:ch211-153b23.4	96	70.752	Amphilophus_citrinellus
ENSPKIG00000025681	si:ch211-153b23.4	60	31.619	ENSAOCG00000010974	si:ch211-153b23.3	59	31.619	Amphiprion_ocellaris
ENSPKIG00000025681	si:ch211-153b23.4	91	68.321	ENSAOCG00000010999	si:ch211-153b23.4	95	68.321	Amphiprion_ocellaris
ENSPKIG00000025681	si:ch211-153b23.4	96	67.464	ENSAPEG00000014665	si:ch211-153b23.4	98	67.464	Amphiprion_percula
ENSPKIG00000025681	si:ch211-153b23.4	60	31.429	ENSAPEG00000014700	si:ch211-153b23.3	59	31.429	Amphiprion_percula
ENSPKIG00000025681	si:ch211-153b23.4	99	69.454	ENSATEG00000004948	si:ch211-153b23.4	98	69.454	Anabas_testudineus
ENSPKIG00000025681	si:ch211-153b23.4	96	60.984	ENSAPLG00000013596	-	99	60.984	Anas_platyrhynchos
ENSPKIG00000025681	si:ch211-153b23.4	99	68.538	ENSACLG00000005471	si:ch211-153b23.4	97	68.538	Astatotilapia_calliptera
ENSPKIG00000025681	si:ch211-153b23.4	97	70.644	ENSAMXG00000013879	si:ch211-153b23.4	98	70.644	Astyanax_mexicanus
ENSPKIG00000025681	si:ch211-153b23.4	98	68.333	ENSCSEG00000014838	si:ch211-153b23.4	99	68.496	Cynoglossus_semilaevis
ENSPKIG00000025681	si:ch211-153b23.4	60	32.952	ENSCSEG00000014853	si:ch211-153b23.3	58	32.952	Cynoglossus_semilaevis
ENSPKIG00000025681	si:ch211-153b23.4	59	32.325	ENSCVAG00000021124	si:ch211-153b23.3	58	32.325	Cyprinodon_variegatus
ENSPKIG00000025681	si:ch211-153b23.4	94	70.494	ENSCVAG00000021145	si:ch211-153b23.4	100	70.494	Cyprinodon_variegatus
ENSPKIG00000025681	si:ch211-153b23.4	98	67.967	ENSDARG00000077169	si:ch211-153b23.4	96	67.967	Danio_rerio
ENSPKIG00000025681	si:ch211-153b23.4	99	65.172	ENSELUG00000004961	si:ch211-153b23.4	98	65.172	Esox_lucius
ENSPKIG00000025681	si:ch211-153b23.4	95	57.753	ENSFALG00000011343	-	96	56.635	Ficedula_albicollis
ENSPKIG00000025681	si:ch211-153b23.4	59	31.478	ENSFHEG00000010030	si:ch211-153b23.3	58	31.478	Fundulus_heteroclitus
ENSPKIG00000025681	si:ch211-153b23.4	84	72.414	ENSFHEG00000009888	si:ch211-153b23.4	81	72.414	Fundulus_heteroclitus
ENSPKIG00000025681	si:ch211-153b23.4	93	70.574	ENSFHEG00000010001	si:ch211-153b23.4	100	70.574	Fundulus_heteroclitus
ENSPKIG00000025681	si:ch211-153b23.4	60	32.331	ENSGAFG00000007455	si:ch211-153b23.3	59	32.331	Gambusia_affinis
ENSPKIG00000025681	si:ch211-153b23.4	90	69.320	ENSGAFG00000007442	si:ch211-153b23.4	93	69.320	Gambusia_affinis
ENSPKIG00000025681	si:ch211-153b23.4	98	68.452	ENSGACG00000018253	si:ch211-153b23.4	99	68.452	Gasterosteus_aculeatus
ENSPKIG00000025681	si:ch211-153b23.4	84	62.999	ENSGAGG00000024601	-	97	62.912	Gopherus_agassizii
ENSPKIG00000025681	si:ch211-153b23.4	78	71.259	ENSHBUG00000000013	si:ch211-153b23.4	89	71.259	Haplochromis_burtoni
ENSPKIG00000025681	si:ch211-153b23.4	55	32.773	ENSIPUG00000015213	si:ch211-153b23.3	54	32.773	Ictalurus_punctatus
ENSPKIG00000025681	si:ch211-153b23.4	98	68.327	ENSIPUG00000015205	si:ch211-153b23.4	100	68.327	Ictalurus_punctatus
ENSPKIG00000025681	si:ch211-153b23.4	99	68.641	ENSKMAG00000006919	-	98	68.641	Kryptolebias_marmoratus
ENSPKIG00000025681	si:ch211-153b23.4	94	70.813	ENSKMAG00000006829	si:ch211-153b23.4	99	70.813	Kryptolebias_marmoratus
ENSPKIG00000025681	si:ch211-153b23.4	59	32.171	ENSLBEG00000026324	si:ch211-153b23.3	57	32.171	Labrus_bergylta
ENSPKIG00000025681	si:ch211-153b23.4	99	69.499	ENSLBEG00000026309	si:ch211-153b23.4	98	69.499	Labrus_bergylta
ENSPKIG00000025681	si:ch211-153b23.4	96	64.536	ENSLACG00000017592	si:ch211-153b23.4	99	64.536	Latimeria_chalumnae
ENSPKIG00000025681	si:ch211-153b23.4	95	72.359	ENSMAMG00000009277	si:ch211-153b23.4	98	72.359	Mastacembelus_armatus
ENSPKIG00000025681	si:ch211-153b23.4	95	72.073	ENSMAMG00000009358	si:ch211-153b23.4	100	72.073	Mastacembelus_armatus
ENSPKIG00000025681	si:ch211-153b23.4	95	69.465	ENSMZEG00005011433	si:ch211-153b23.4	100	69.465	Maylandia_zebra
ENSPKIG00000025681	si:ch211-153b23.4	96	60.822	ENSMGAG00000005478	-	99	60.822	Meleagris_gallopavo
ENSPKIG00000025681	si:ch211-153b23.4	94	69.506	ENSMMOG00000004425	si:ch211-153b23.4	100	69.506	Mola_mola
ENSPKIG00000025681	si:ch211-153b23.4	93	69.925	ENSNBRG00000013392	si:ch211-153b23.4	100	69.925	Neolamprologus_brichardi
ENSPKIG00000025681	si:ch211-153b23.4	99	68.341	ENSONIG00000017875	si:ch211-153b23.4	98	68.341	Oreochromis_niloticus
ENSPKIG00000025681	si:ch211-153b23.4	99	65.505	ENSORLG00000006169	si:ch211-153b23.4	98	65.505	Oryzias_latipes
ENSPKIG00000025681	si:ch211-153b23.4	99	65.738	ENSORLG00020009905	si:ch211-153b23.4	98	65.738	Oryzias_latipes_hni
ENSPKIG00000025681	si:ch211-153b23.4	99	65.621	ENSORLG00015003709	si:ch211-153b23.4	98	65.621	Oryzias_latipes_hsok
ENSPKIG00000025681	si:ch211-153b23.4	59	32.184	ENSOMEG00000007661	si:ch211-153b23.3	59	32.184	Oryzias_melastigma
ENSPKIG00000025681	si:ch211-153b23.4	98	67.217	ENSOMEG00000007682	si:ch211-153b23.4	98	66.395	Oryzias_melastigma
ENSPKIG00000025681	si:ch211-153b23.4	95	57.908	ENSPMGG00000001313	si:ch211-153b23.4	91	58.029	Periophthalmus_magnuspinnatus
ENSPKIG00000025681	si:ch211-153b23.4	79	74.047	ENSPFOG00000012164	si:ch211-153b23.4	95	74.047	Poecilia_formosa
ENSPKIG00000025681	si:ch211-153b23.4	93	70.932	ENSPLAG00000016295	si:ch211-153b23.4	99	70.932	Poecilia_latipinna
ENSPKIG00000025681	si:ch211-153b23.4	89	70.182	ENSPMEG00000007538	si:ch211-153b23.4	96	69.620	Poecilia_mexicana
ENSPKIG00000025681	si:ch211-153b23.4	95	69.343	ENSPNYG00000000250	si:ch211-153b23.4	100	69.343	Pundamilia_nyererei
ENSPKIG00000025681	si:ch211-153b23.4	99	71.528	ENSPNAG00000019554	si:ch211-153b23.4	98	71.528	Pygocentrus_nattereri
ENSPKIG00000025681	si:ch211-153b23.4	100	70.762	ENSSFOG00015003920	-	99	70.762	Scleropages_formosus
ENSPKIG00000025681	si:ch211-153b23.4	99	77.894	ENSSFOG00015010891	si:ch211-153b23.4	99	77.894	Scleropages_formosus
ENSPKIG00000025681	si:ch211-153b23.4	55	34.029	ENSSFOG00015010910	si:ch211-153b23.3	55	34.029	Scleropages_formosus
ENSPKIG00000025681	si:ch211-153b23.4	99	68.390	ENSSMAG00000010067	si:ch211-153b23.4	98	68.390	Scophthalmus_maximus
ENSPKIG00000025681	si:ch211-153b23.4	82	74.306	ENSSDUG00000006842	si:ch211-153b23.4	89	74.306	Seriola_dumerili
ENSPKIG00000025681	si:ch211-153b23.4	78	68.648	ENSSDUG00000006931	si:ch211-153b23.4	92	68.648	Seriola_dumerili
ENSPKIG00000025681	si:ch211-153b23.4	94	71.358	ENSSDUG00000006671	si:ch211-153b23.4	100	71.358	Seriola_dumerili
ENSPKIG00000025681	si:ch211-153b23.4	59	32.948	ENSSLDG00000008629	si:ch211-153b23.3	57	32.948	Seriola_lalandi_dorsalis
ENSPKIG00000025681	si:ch211-153b23.4	95	61.247	ENSTGUG00000005499	-	99	61.247	Taeniopygia_guttata
ENSPKIG00000025681	si:ch211-153b23.4	94	68.395	ENSTRUG00000003247	si:ch211-153b23.4	100	68.395	Takifugu_rubripes
ENSPKIG00000025681	si:ch211-153b23.4	96	66.424	ENSTNIG00000008958	si:ch211-153b23.4	99	66.424	Tetraodon_nigroviridis
ENSPKIG00000025681	si:ch211-153b23.4	99	55.456	ENSXETG00000004489	-	97	55.456	Xenopus_tropicalis
ENSPKIG00000025681	si:ch211-153b23.4	60	32.150	ENSXMAG00000029318	si:ch211-153b23.3	59	32.150	Xiphophorus_maculatus
ENSPKIG00000025681	si:ch211-153b23.4	96	70.723	ENSXMAG00000021388	si:ch211-153b23.4	99	70.723	Xiphophorus_maculatus
ENSPKIG00000025681	si:ch211-153b23.4	95	70.085	ENSXMAG00000009416	-	96	70.085	Xiphophorus_maculatus