EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000026 (Gene tree)
Gene ID: 106938127
Gene Symbol: a1cf
Alias: -
Full Name: APOBEC1 complementation factor-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7112 bases
Position: chrKQ547814.1:76974-84085
Accession: 106938127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001059	DND1_DSRM	PF14709.7	6.3e-26	1	1
ENSPLAP00000001059	RRM_1	PF00076.22	1.2e-40	1	3
ENSPLAP00000001059	RRM_1	PF00076.22	1.2e-40	2	3
ENSPLAP00000001059	RRM_1	PF00076.22	1.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015392	-	1821	XM_015019978	ENSPLAP00000001059	606 (aa)	XP_014875464	UPI00072DB22C

Gene Model

Click here to download ENSPLAG00000000026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000026	a1cf	86	66.102	ENSPLAG00000004541	rbm46	70	67.361
ENSPLAG00000000026	a1cf	87	53.510	ENSPLAG00000002072	rbm47	58	69.967
ENSPLAG00000000026	a1cf	100	100.000	ENSPLAG00000001210	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000026	a1cf	100	77.063	ENSG00000148584	A1CF	100	87.129	Homo_sapiens
ENSPLAG00000000026	a1cf	100	85.314	ENSAPOG00000008259	a1cf	100	85.149	Acanthochromis_polyacanthus
ENSPLAG00000000026	a1cf	100	75.081	ENSAMEG00000000523	A1CF	100	74.430	Ailuropoda_melanoleuca
ENSPLAG00000000026	a1cf	100	88.633	ENSACIG00000008632	a1cf	100	90.445	Amphilophus_citrinellus
ENSPLAG00000000026	a1cf	100	87.294	ENSAOCG00000023744	a1cf	100	87.129	Amphiprion_ocellaris
ENSPLAG00000000026	a1cf	100	86.156	ENSAPEG00000009537	a1cf	100	85.831	Amphiprion_percula
ENSPLAG00000000026	a1cf	100	91.419	ENSATEG00000013720	a1cf	100	91.419	Anabas_testudineus
ENSPLAG00000000026	a1cf	100	76.221	ENSAPLG00000002964	A1CF	100	74.756	Anas_platyrhynchos
ENSPLAG00000000026	a1cf	100	76.898	ENSACAG00000015269	A1CF	100	76.403	Anolis_carolinensis
ENSPLAG00000000026	a1cf	100	78.053	ENSANAG00000019974	A1CF	100	76.238	Aotus_nancymaae
ENSPLAG00000000026	a1cf	100	86.161	ENSACLG00000017428	a1cf	100	85.338	Astatotilapia_calliptera
ENSPLAG00000000026	a1cf	100	75.566	ENSAMXG00000018180	a1cf	100	74.595	Astyanax_mexicanus
ENSPLAG00000000026	a1cf	100	77.393	ENSBTAG00000021195	A1CF	100	76.238	Bos_taurus
ENSPLAG00000000026	a1cf	100	76.873	ENSCJAG00000005045	A1CF	100	75.081	Callithrix_jacchus
ENSPLAG00000000026	a1cf	100	75.896	ENSCAFG00000015581	A1CF	100	74.267	Canis_familiaris
ENSPLAG00000000026	a1cf	100	75.896	ENSCAFG00020026421	A1CF	98	82.333	Canis_lupus_dingo
ENSPLAG00000000026	a1cf	100	76.873	ENSCHIG00000020411	A1CF	100	75.733	Capra_hircus
ENSPLAG00000000026	a1cf	94	76.923	ENSTSYG00000001755	A1CF	100	75.524	Carlito_syrichta
ENSPLAG00000000026	a1cf	100	73.178	ENSCAPG00000017386	A1CF	100	75.080	Cavia_aperea
ENSPLAG00000000026	a1cf	100	75.570	ENSCPOG00000009807	A1CF	100	73.941	Cavia_porcellus
ENSPLAG00000000026	a1cf	100	76.873	ENSCCAG00000018168	A1CF	100	74.919	Cebus_capucinus
ENSPLAG00000000026	a1cf	100	77.228	ENSCATG00000043715	A1CF	100	75.743	Cercocebus_atys
ENSPLAG00000000026	a1cf	100	75.407	ENSCLAG00000010424	A1CF	100	73.453	Chinchilla_lanigera
ENSPLAG00000000026	a1cf	100	76.059	ENSCSAG00000007032	A1CF	100	74.593	Chlorocebus_sabaeus
ENSPLAG00000000026	a1cf	98	74.124	ENSCHOG00000009089	A1CF	94	74.826	Choloepus_hoffmanni
ENSPLAG00000000026	a1cf	100	76.710	ENSCPBG00000026464	A1CF	100	74.919	Chrysemys_picta_bellii
ENSPLAG00000000026	a1cf	100	76.221	ENSCANG00000038032	A1CF	100	74.756	Colobus_angolensis_palliatus
ENSPLAG00000000026	a1cf	100	75.570	ENSCGRG00001017413	A1cf	100	74.267	Cricetulus_griseus_chok1gshd
ENSPLAG00000000026	a1cf	100	74.513	ENSCGRG00000017332	A1cf	100	73.616	Cricetulus_griseus_crigri
ENSPLAG00000000026	a1cf	100	84.814	ENSCSEG00000002361	a1cf	100	84.814	Cynoglossus_semilaevis
ENSPLAG00000000026	a1cf	100	95.710	ENSCVAG00000010520	a1cf	100	95.710	Cyprinodon_variegatus
ENSPLAG00000000026	a1cf	100	82.838	ENSDARG00000002968	a1cf	100	81.518	Danio_rerio
ENSPLAG00000000026	a1cf	100	76.059	ENSDNOG00000002829	A1CF	100	74.756	Dasypus_novemcinctus
ENSPLAG00000000026	a1cf	82	84.058	ENSETEG00000012527	A1CF	81	84.058	Echinops_telfairi
ENSPLAG00000000026	a1cf	100	76.260	ENSEASG00005012924	A1CF	100	74.797	Equus_asinus_asinus
ENSPLAG00000000026	a1cf	100	75.935	ENSECAG00000010424	A1CF	100	74.472	Equus_caballus
ENSPLAG00000000026	a1cf	79	67.227	ENSEEUG00000000013	A1CF	97	66.376	Erinaceus_europaeus
ENSPLAG00000000026	a1cf	100	80.945	ENSELUG00000003159	a1cf	100	79.967	Esox_lucius
ENSPLAG00000000026	a1cf	100	76.316	ENSFCAG00000011179	A1CF	100	75.413	Felis_catus
ENSPLAG00000000026	a1cf	100	77.888	ENSFALG00000013183	A1CF	100	76.238	Ficedula_albicollis
ENSPLAG00000000026	a1cf	100	77.063	ENSFDAG00000019371	A1CF	100	75.578	Fukomys_damarensis
ENSPLAG00000000026	a1cf	100	89.274	ENSFHEG00000019652	a1cf	96	96.094	Fundulus_heteroclitus
ENSPLAG00000000026	a1cf	100	78.654	ENSGMOG00000018943	a1cf	100	77.011	Gadus_morhua
ENSPLAG00000000026	a1cf	96	75.382	ENSGALG00000003765	A1CF	96	74.182	Gallus_gallus
ENSPLAG00000000026	a1cf	100	90.099	ENSGAFG00000014868	a1cf	100	89.109	Gambusia_affinis
ENSPLAG00000000026	a1cf	100	85.505	ENSGACG00000010241	a1cf	100	84.528	Gasterosteus_aculeatus
ENSPLAG00000000026	a1cf	96	75.382	ENSGAGG00000016508	A1CF	98	73.514	Gopherus_agassizii
ENSPLAG00000000026	a1cf	100	76.059	ENSGGOG00000009670	A1CF	100	74.593	Gorilla_gorilla
ENSPLAG00000000026	a1cf	100	88.962	ENSHBUG00000021959	a1cf	100	89.127	Haplochromis_burtoni
ENSPLAG00000000026	a1cf	100	76.221	ENSHGLG00000008955	A1CF	100	74.267	Heterocephalus_glaber_female
ENSPLAG00000000026	a1cf	100	75.570	ENSHGLG00100000518	A1CF	100	73.616	Heterocephalus_glaber_male
ENSPLAG00000000026	a1cf	100	74.116	ENSHCOG00000017669	a1cf	100	76.045	Hippocampus_comes
ENSPLAG00000000026	a1cf	88	83.272	ENSIPUG00000010367	a1cf	95	82.169	Ictalurus_punctatus
ENSPLAG00000000026	a1cf	100	89.789	ENSKMAG00000006568	a1cf	100	87.844	Kryptolebias_marmoratus
ENSPLAG00000000026	a1cf	99	88.111	ENSLBEG00000020994	a1cf	99	87.948	Labrus_bergylta
ENSPLAG00000000026	a1cf	100	78.548	ENSLACG00000008061	A1CF	100	76.733	Latimeria_chalumnae
ENSPLAG00000000026	a1cf	100	81.433	ENSLOCG00000006302	a1cf	100	79.642	Lepisosteus_oculatus
ENSPLAG00000000026	a1cf	100	76.221	ENSLAFG00000015462	A1CF	100	75.407	Loxodonta_africana
ENSPLAG00000000026	a1cf	100	77.228	ENSMFAG00000035948	A1CF	100	75.743	Macaca_fascicularis
ENSPLAG00000000026	a1cf	100	77.228	ENSMMUG00000007077	A1CF	100	75.743	Macaca_mulatta
ENSPLAG00000000026	a1cf	100	77.063	ENSMNEG00000031454	A1CF	100	75.578	Macaca_nemestrina
ENSPLAG00000000026	a1cf	100	76.221	ENSMLEG00000037223	A1CF	100	74.756	Mandrillus_leucophaeus
ENSPLAG00000000026	a1cf	100	88.797	ENSMAMG00000010402	a1cf	100	87.479	Mastacembelus_armatus
ENSPLAG00000000026	a1cf	100	85.668	ENSMZEG00005013245	a1cf	100	84.528	Maylandia_zebra
ENSPLAG00000000026	a1cf	100	75.610	ENSMGAG00000001507	A1CF	100	73.984	Meleagris_gallopavo
ENSPLAG00000000026	a1cf	100	75.081	ENSMAUG00000007422	A1cf	100	73.941	Mesocricetus_auratus
ENSPLAG00000000026	a1cf	100	76.316	ENSMICG00000003377	A1CF	100	75.658	Microcebus_murinus
ENSPLAG00000000026	a1cf	100	75.407	ENSMOCG00000021536	A1cf	100	73.941	Microtus_ochrogaster
ENSPLAG00000000026	a1cf	100	77.063	ENSMMOG00000009422	a1cf	100	76.073	Mola_mola
ENSPLAG00000000026	a1cf	89	78.771	ENSMODG00000016478	A1CF	97	76.909	Monodelphis_domestica
ENSPLAG00000000026	a1cf	100	80.000	ENSMALG00000012992	a1cf	100	79.868	Monopterus_albus
ENSPLAG00000000026	a1cf	100	76.238	MGP_CAROLIEiJ_G0022873	A1cf	100	74.752	Mus_caroli
ENSPLAG00000000026	a1cf	100	76.238	ENSMUSG00000052595	A1cf	99	82.338	Mus_musculus
ENSPLAG00000000026	a1cf	100	75.413	MGP_PahariEiJ_G0014366	A1cf	100	73.927	Mus_pahari
ENSPLAG00000000026	a1cf	100	76.238	MGP_SPRETEiJ_G0023792	A1cf	100	74.752	Mus_spretus
ENSPLAG00000000026	a1cf	100	71.010	ENSMPUG00000016971	A1CF	100	69.381	Mustela_putorius_furo
ENSPLAG00000000026	a1cf	100	75.812	ENSMLUG00000016071	A1CF	100	74.919	Myotis_lucifugus
ENSPLAG00000000026	a1cf	100	76.059	ENSNGAG00000015136	A1cf	100	74.430	Nannospalax_galili
ENSPLAG00000000026	a1cf	100	89.127	ENSNBRG00000001712	a1cf	100	89.292	Neolamprologus_brichardi
ENSPLAG00000000026	a1cf	100	76.710	ENSNLEG00000012028	A1CF	100	75.244	Nomascus_leucogenys
ENSPLAG00000000026	a1cf	94	77.273	ENSMEUG00000015909	A1CF	100	74.825	Notamacropus_eugenii
ENSPLAG00000000026	a1cf	88	68.946	ENSOPRG00000010667	A1CF	100	66.075	Ochotona_princeps
ENSPLAG00000000026	a1cf	100	89.621	ENSONIG00000019105	a1cf	100	88.962	Oreochromis_niloticus
ENSPLAG00000000026	a1cf	78	78.316	ENSOANG00000007360	A1CF	99	77.684	Ornithorhynchus_anatinus
ENSPLAG00000000026	a1cf	100	76.403	ENSOCUG00000011587	A1CF	100	74.917	Oryctolagus_cuniculus
ENSPLAG00000000026	a1cf	100	84.039	ENSORLG00000013342	a1cf	100	84.228	Oryzias_latipes
ENSPLAG00000000026	a1cf	100	86.667	ENSORLG00020000586	a1cf	100	86.829	Oryzias_latipes_hni
ENSPLAG00000000026	a1cf	100	86.667	ENSORLG00015018569	a1cf	100	86.829	Oryzias_latipes_hsok
ENSPLAG00000000026	a1cf	100	87.954	ENSOMEG00000013531	a1cf	100	86.634	Oryzias_melastigma
ENSPLAG00000000026	a1cf	100	75.570	ENSOGAG00000012884	A1CF	100	74.919	Otolemur_garnettii
ENSPLAG00000000026	a1cf	100	76.547	ENSOARG00000013695	A1CF	100	75.407	Ovis_aries
ENSPLAG00000000026	a1cf	97	74.454	ENSPPAG00000028115	A1CF	99	77.647	Pan_paniscus
ENSPLAG00000000026	a1cf	100	75.325	ENSPPRG00000012180	A1CF	100	74.430	Panthera_pardus
ENSPLAG00000000026	a1cf	100	75.325	ENSPTIG00000021223	A1CF	100	74.430	Panthera_tigris_altaica
ENSPLAG00000000026	a1cf	100	77.063	ENSPTRG00000002508	A1CF	100	75.578	Pan_troglodytes
ENSPLAG00000000026	a1cf	100	77.228	ENSPANG00000021988	A1CF	100	75.743	Papio_anubis
ENSPLAG00000000026	a1cf	100	79.967	ENSPKIG00000025176	a1cf	100	78.990	Paramormyrops_kingsleyae
ENSPLAG00000000026	a1cf	100	77.558	ENSPSIG00000010318	A1CF	100	75.908	Pelodiscus_sinensis
ENSPLAG00000000026	a1cf	98	70.638	ENSPMGG00000013359	a1cf	99	70.383	Periophthalmus_magnuspinnatus
ENSPLAG00000000026	a1cf	100	75.733	ENSPEMG00000015021	A1cf	100	74.267	Peromyscus_maniculatus_bairdii
ENSPLAG00000000026	a1cf	100	77.228	ENSPCIG00000002175	A1CF	100	75.578	Phascolarctos_cinereus
ENSPLAG00000000026	a1cf	100	98.208	ENSPFOG00000006683	a1cf	100	98.208	Poecilia_formosa
ENSPLAG00000000026	a1cf	100	98.534	ENSPFOG00000007437	-	100	98.534	Poecilia_formosa
ENSPLAG00000000026	a1cf	100	87.622	ENSPMEG00000015529	-	100	87.622	Poecilia_mexicana
ENSPLAG00000000026	a1cf	100	88.779	ENSPMEG00000000921	a1cf	100	88.779	Poecilia_mexicana
ENSPLAG00000000026	a1cf	100	96.906	ENSPREG00000016298	a1cf	100	96.906	Poecilia_reticulata
ENSPLAG00000000026	a1cf	100	77.723	ENSPPYG00000002819	A1CF	100	76.238	Pongo_abelii
ENSPLAG00000000026	a1cf	80	60.870	ENSPCAG00000006463	A1CF	79	60.248	Procavia_capensis
ENSPLAG00000000026	a1cf	100	75.244	ENSPCOG00000024172	A1CF	100	74.430	Propithecus_coquereli
ENSPLAG00000000026	a1cf	100	88.130	ENSPNYG00000017944	a1cf	100	88.293	Pundamilia_nyererei
ENSPLAG00000000026	a1cf	100	83.388	ENSPNAG00000007704	a1cf	100	82.566	Pygocentrus_nattereri
ENSPLAG00000000026	a1cf	100	76.898	ENSRNOG00000033195	A1cf	100	75.413	Rattus_norvegicus
ENSPLAG00000000026	a1cf	100	70.455	ENSRBIG00000042892	A1CF	100	73.321	Rhinopithecus_bieti
ENSPLAG00000000026	a1cf	100	76.221	ENSRROG00000041398	A1CF	100	74.756	Rhinopithecus_roxellana
ENSPLAG00000000026	a1cf	100	76.873	ENSSBOG00000021930	A1CF	100	75.407	Saimiri_boliviensis_boliviensis
ENSPLAG00000000026	a1cf	100	77.063	ENSSHAG00000005096	A1CF	100	74.752	Sarcophilus_harrisii
ENSPLAG00000000026	a1cf	100	82.566	ENSSFOG00015011774	a1cf	100	81.908	Scleropages_formosus
ENSPLAG00000000026	a1cf	100	87.987	ENSSMAG00000013271	a1cf	100	87.987	Scophthalmus_maximus
ENSPLAG00000000026	a1cf	100	88.599	ENSSDUG00000013930	a1cf	100	88.274	Seriola_dumerili
ENSPLAG00000000026	a1cf	100	83.168	ENSSLDG00000004290	a1cf	100	83.168	Seriola_lalandi_dorsalis
ENSPLAG00000000026	a1cf	95	69.217	ENSSARG00000005940	A1CF	95	68.696	Sorex_araneus
ENSPLAG00000000026	a1cf	97	74.454	ENSSPUG00000006797	A1CF	95	73.129	Sphenodon_punctatus
ENSPLAG00000000026	a1cf	100	76.710	ENSSSCG00000010431	A1CF	100	75.407	Sus_scrofa
ENSPLAG00000000026	a1cf	100	77.236	ENSTGUG00000005090	A1CF	100	75.772	Taeniopygia_guttata
ENSPLAG00000000026	a1cf	100	86.016	ENSTRUG00000001982	a1cf	100	86.504	Takifugu_rubripes
ENSPLAG00000000026	a1cf	100	85.227	ENSTNIG00000003580	a1cf	100	85.227	Tetraodon_nigroviridis
ENSPLAG00000000026	a1cf	95	73.043	ENSTTRG00000013190	A1CF	94	71.826	Tursiops_truncatus
ENSPLAG00000000026	a1cf	100	77.063	ENSUAMG00000020065	A1CF	100	75.413	Ursus_americanus
ENSPLAG00000000026	a1cf	100	75.570	ENSUMAG00000011162	A1CF	100	74.104	Ursus_maritimus
ENSPLAG00000000026	a1cf	87	74.340	ENSVPAG00000006130	A1CF	86	72.642	Vicugna_pacos
ENSPLAG00000000026	a1cf	100	77.063	ENSVVUG00000002504	A1CF	100	75.413	Vulpes_vulpes
ENSPLAG00000000026	a1cf	100	71.173	ENSXETG00000006611	a1cf	100	70.358	Xenopus_tropicalis
ENSPLAG00000000026	a1cf	100	97.690	ENSXCOG00000003302	a1cf	100	97.690	Xiphophorus_couchianus
ENSPLAG00000000026	a1cf	100	96.417	ENSXMAG00000016703	a1cf	100	96.417	Xiphophorus_maculatus