EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000053 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7089 bases
Position: chrKQ545483.1:98301-105389
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002239	MMR_HSR1	PF01926.23	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013378	-	519	-	ENSPLAP00000002239	172 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000000053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000053	-	76	39.394	ENSPLAG00000020289	-	56	39.394
ENSPLAG00000000053	-	66	49.565	ENSPLAG00000017599	-	80	49.138
ENSPLAG00000000053	-	82	44.660	ENSPLAG00000020776	-	50	44.660
ENSPLAG00000000053	-	69	45.455	ENSPLAG00000017609	-	54	45.455
ENSPLAG00000000053	-	75	48.462	ENSPLAG00000017588	-	78	48.462
ENSPLAG00000000053	-	72	58.871	ENSPLAG00000000052	-	54	58.871
ENSPLAG00000000053	-	77	42.735	ENSPLAG00000002564	-	52	36.765
ENSPLAG00000000053	-	73	48.800	ENSPLAG00000010015	-	55	48.800
ENSPLAG00000000053	-	69	47.899	ENSPLAG00000023644	-	51	47.899
ENSPLAG00000000053	-	69	47.458	ENSPLAG00000017835	-	50	47.458
ENSPLAG00000000053	-	68	52.991	ENSPLAG00000010124	-	60	52.991
ENSPLAG00000000053	-	73	42.308	ENSPLAG00000010482	-	59	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000053	-	69	65.254	ENSACIG00000012718	-	50	65.254	Amphilophus_citrinellus
ENSPLAG00000000053	-	84	67.227	ENSAOCG00000013686	-	63	67.227	Amphiprion_ocellaris
ENSPLAG00000000053	-	68	49.573	ENSAMXG00000039685	-	50	49.573	Astyanax_mexicanus
ENSPLAG00000000053	-	65	55.357	ENSAMXG00000030826	-	55	55.357	Astyanax_mexicanus
ENSPLAG00000000053	-	69	61.667	ENSCVAG00000023293	-	56	61.667	Cyprinodon_variegatus
ENSPLAG00000000053	-	70	56.198	ENSFHEG00000021828	-	51	56.198	Fundulus_heteroclitus
ENSPLAG00000000053	-	75	61.940	ENSHBUG00000020672	-	63	61.940	Haplochromis_burtoni
ENSPLAG00000000053	-	73	58.519	ENSLBEG00000028623	-	50	58.519	Labrus_bergylta
ENSPLAG00000000053	-	71	63.478	ENSLBEG00000017021	-	59	64.035	Labrus_bergylta
ENSPLAG00000000053	-	74	40.602	ENSMAMG00000017590	-	73	40.602	Mastacembelus_armatus
ENSPLAG00000000053	-	72	65.354	ENSMZEG00005027848	-	60	65.354	Maylandia_zebra
ENSPLAG00000000053	-	84	61.207	ENSONIG00000013819	-	58	61.207	Oreochromis_niloticus
ENSPLAG00000000053	-	85	58.871	ENSONIG00000010736	-	50	61.404	Oreochromis_niloticus
ENSPLAG00000000053	-	75	60.465	ENSONIG00000014210	-	54	60.465	Oreochromis_niloticus
ENSPLAG00000000053	-	72	65.289	ENSPFOG00000000259	-	53	65.289	Poecilia_formosa
ENSPLAG00000000053	-	72	63.415	ENSPFOG00000000217	-	53	63.415	Poecilia_formosa
ENSPLAG00000000053	-	77	64.516	ENSPMEG00000009705	-	51	64.516	Poecilia_mexicana
ENSPLAG00000000053	-	73	65.600	ENSSMAG00000016994	-	58	65.600	Scophthalmus_maximus
ENSPLAG00000000053	-	69	66.949	ENSSDUG00000016612	-	57	66.949	Seriola_dumerili
ENSPLAG00000000053	-	76	54.918	ENSSDUG00000021006	-	60	54.918	Seriola_dumerili
ENSPLAG00000000053	-	67	66.957	ENSSLDG00000002744	-	54	66.957	Seriola_lalandi_dorsalis
ENSPLAG00000000053	-	84	60.274	ENSSLDG00000011692	-	59	65.600	Seriola_lalandi_dorsalis