EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000061 (Gene tree)
Gene ID: 106953185
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 10147 bases
Position: chrKQ545883.1:195205-205351
Accession: 106953185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002431	RRM_1	PF00076.22	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013058	-	1794	XM_015041765	ENSPLAP00000002431	321 (aa)	XP_014897251	UPI00072DA67F

Gene Model

Click here to download ENSPLAG00000000061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000061	-	67	55.411	ENSPLAG00000009877	-	58	51.982
ENSPLAG00000000061	-	67	58.590	ENSPLAG00000011323	ralyl	79	56.522
ENSPLAG00000000061	-	86	74.113	ENSPLAG00000015305	-	82	76.680

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000061	-	65	57.277	ENSG00000184672	RALYL	91	77.922	Homo_sapiens
ENSPLAG00000000061	-	78	86.561	ENSAPOG00000006963	hnrnpc	81	81.818	Acanthochromis_polyacanthus
ENSPLAG00000000061	-	79	81.467	ENSACIG00000000270	-	82	83.333	Amphilophus_citrinellus
ENSPLAG00000000061	-	97	85.942	ENSACIG00000016568	-	99	87.702	Amphilophus_citrinellus
ENSPLAG00000000061	-	100	89.783	ENSAOCG00000021616	-	100	87.307	Amphiprion_ocellaris
ENSPLAG00000000061	-	78	86.957	ENSAOCG00000003896	-	81	82.213	Amphiprion_ocellaris
ENSPLAG00000000061	-	82	91.698	ENSAPEG00000019962	-	100	77.707	Amphiprion_percula
ENSPLAG00000000061	-	78	86.957	ENSAPEG00000001489	-	81	82.213	Amphiprion_percula
ENSPLAG00000000061	-	82	91.353	ENSATEG00000018006	-	100	86.544	Anabas_testudineus
ENSPLAG00000000061	-	79	82.879	ENSATEG00000011734	-	84	81.028	Anabas_testudineus
ENSPLAG00000000061	-	85	46.735	ENSAPLG00000015574	RALYL	75	55.204	Anas_platyrhynchos
ENSPLAG00000000061	-	65	55.111	ENSACAG00000028464	RALYL	74	55.656	Anolis_carolinensis
ENSPLAG00000000061	-	65	57.277	ENSANAG00000023383	RALYL	73	57.895	Aotus_nancymaae
ENSPLAG00000000061	-	82	89.139	ENSACLG00000005707	-	90	89.888	Astatotilapia_calliptera
ENSPLAG00000000061	-	86	74.733	ENSACLG00000013636	-	84	79.447	Astatotilapia_calliptera
ENSPLAG00000000061	-	86	75.089	ENSACLG00000000995	-	81	83.562	Astatotilapia_calliptera
ENSPLAG00000000061	-	88	62.324	ENSAMXG00000042946	hnrnpc	99	73.196	Astyanax_mexicanus
ENSPLAG00000000061	-	84	77.122	ENSAMXG00000034915	zgc:55733	86	75.600	Astyanax_mexicanus
ENSPLAG00000000061	-	65	57.277	ENSCJAG00000000402	RALYL	73	57.895	Callithrix_jacchus
ENSPLAG00000000061	-	65	55.405	ENSCPOG00000012314	RALYL	74	55.455	Cavia_porcellus
ENSPLAG00000000061	-	65	57.277	ENSCCAG00000025003	RALYL	75	77.922	Cebus_capucinus
ENSPLAG00000000061	-	65	57.277	ENSCATG00000042145	RALYL	73	57.895	Cercocebus_atys
ENSPLAG00000000061	-	65	55.405	ENSCLAG00000005228	RALYL	74	55.455	Chinchilla_lanigera
ENSPLAG00000000061	-	65	54.222	ENSCHOG00000013228	RALYL	74	52.489	Choloepus_hoffmanni
ENSPLAG00000000061	-	65	57.277	ENSCANG00000039144	RALYL	73	57.895	Colobus_angolensis_palliatus
ENSPLAG00000000061	-	65	54.667	ENSCGRG00001009241	Ralyl	74	54.751	Cricetulus_griseus_chok1gshd
ENSPLAG00000000061	-	69	76.786	ENSCSEG00000019769	-	74	74.545	Cynoglossus_semilaevis
ENSPLAG00000000061	-	78	88.400	ENSCSEG00000021349	-	78	86.400	Cynoglossus_semilaevis
ENSPLAG00000000061	-	100	96.308	ENSCVAG00000016981	-	100	96.308	Cyprinodon_variegatus
ENSPLAG00000000061	-	86	65.480	ENSCVAG00000002797	-	85	66.142	Cyprinodon_variegatus
ENSPLAG00000000061	-	76	81.301	ENSDARG00000053810	hnrnpc	96	73.463	Danio_rerio
ENSPLAG00000000061	-	82	79.087	ENSDARG00000103845	zgc:55733	90	75.100	Danio_rerio
ENSPLAG00000000061	-	65	55.556	ENSDORG00000003721	Ralyl	74	55.656	Dipodomys_ordii
ENSPLAG00000000061	-	50	56.647	ENSETEG00000014028	RALYL	81	60.377	Echinops_telfairi
ENSPLAG00000000061	-	65	49.537	ENSEBUG00000006049	RALYL	73	48.571	Eptatretus_burgeri
ENSPLAG00000000061	-	83	41.844	ENSEBUG00000012363	hnrnpc	69	44.130	Eptatretus_burgeri
ENSPLAG00000000061	-	65	55.111	ENSEEUG00000007202	RALYL	76	55.455	Erinaceus_europaeus
ENSPLAG00000000061	-	77	79.167	ENSELUG00000007714	-	88	75.862	Esox_lucius
ENSPLAG00000000061	-	82	78.309	ENSELUG00000004132	-	99	74.038	Esox_lucius
ENSPLAG00000000061	-	65	58.140	ENSFALG00000008647	RALYL	96	58.294	Ficedula_albicollis
ENSPLAG00000000061	-	97	88.415	ENSFHEG00000007278	-	99	87.654	Fundulus_heteroclitus
ENSPLAG00000000061	-	88	75.087	ENSFHEG00000003605	-	83	75.591	Fundulus_heteroclitus
ENSPLAG00000000061	-	65	58.216	ENSGALG00000036938	RALYL	74	55.204	Gallus_gallus
ENSPLAG00000000061	-	97	98.714	ENSGAFG00000020992	-	100	98.714	Gambusia_affinis
ENSPLAG00000000061	-	86	74.648	ENSGAFG00000020486	-	80	78.241	Gambusia_affinis
ENSPLAG00000000061	-	68	73.214	ENSGACG00000018932	-	85	67.273	Gasterosteus_aculeatus
ENSPLAG00000000061	-	100	79.217	ENSGACG00000017772	-	96	89.558	Gasterosteus_aculeatus
ENSPLAG00000000061	-	65	57.277	ENSGGOG00000000841	RALYL	73	57.895	Gorilla_gorilla
ENSPLAG00000000061	-	86	75.445	ENSHBUG00000018342	-	82	80.237	Haplochromis_burtoni
ENSPLAG00000000061	-	100	84.000	ENSHBUG00000010527	-	100	84.923	Haplochromis_burtoni
ENSPLAG00000000061	-	65	54.955	ENSHGLG00000004866	RALYL	74	55.000	Heterocephalus_glaber_female
ENSPLAG00000000061	-	65	54.955	ENSHGLG00100017480	RALYL	74	55.000	Heterocephalus_glaber_male
ENSPLAG00000000061	-	80	83.456	ENSHCOG00000012333	hnrnpc	91	83.394	Hippocampus_comes
ENSPLAG00000000061	-	80	79.457	ENSIPUG00000011271	hnrnpc	99	77.632	Ictalurus_punctatus
ENSPLAG00000000061	-	90	73.630	ENSIPUG00000008666	zgc:55733	99	74.783	Ictalurus_punctatus
ENSPLAG00000000061	-	65	55.605	ENSSTOG00000012583	RALYL	76	55.204	Ictidomys_tridecemlineatus
ENSPLAG00000000061	-	100	89.783	ENSKMAG00000018265	-	100	91.950	Kryptolebias_marmoratus
ENSPLAG00000000061	-	89	74.483	ENSKMAG00000011170	-	81	79.051	Kryptolebias_marmoratus
ENSPLAG00000000061	-	96	70.679	ENSLBEG00000024418	-	84	72.868	Labrus_bergylta
ENSPLAG00000000061	-	100	81.988	ENSLBEG00000006193	-	100	83.851	Labrus_bergylta
ENSPLAG00000000061	-	88	74.394	ENSLBEG00000006979	-	85	76.305	Labrus_bergylta
ENSPLAG00000000061	-	81	70.149	ENSLOCG00000002560	hnrnpc	88	69.380	Lepisosteus_oculatus
ENSPLAG00000000061	-	65	57.277	ENSMNEG00000033288	RALYL	73	57.895	Macaca_nemestrina
ENSPLAG00000000061	-	65	57.277	ENSMLEG00000038284	RALYL	73	57.895	Mandrillus_leucophaeus
ENSPLAG00000000061	-	79	82.812	ENSMAMG00000012236	-	84	79.365	Mastacembelus_armatus
ENSPLAG00000000061	-	100	82.407	ENSMAMG00000008033	-	100	84.877	Mastacembelus_armatus
ENSPLAG00000000061	-	100	84.000	ENSMZEG00005024249	-	100	84.923	Maylandia_zebra
ENSPLAG00000000061	-	86	75.089	ENSMZEG00005020460	-	87	78.125	Maylandia_zebra
ENSPLAG00000000061	-	65	54.667	ENSMAUG00000015149	Ralyl	74	54.751	Mesocricetus_auratus
ENSPLAG00000000061	-	65	57.075	ENSMICG00000005558	RALYL	78	77.922	Microcebus_murinus
ENSPLAG00000000061	-	65	55.157	ENSMOCG00000017371	Ralyl	74	54.751	Microtus_ochrogaster
ENSPLAG00000000061	-	90	86.986	ENSMMOG00000019520	-	100	85.959	Mola_mola
ENSPLAG00000000061	-	86	78.777	ENSMMOG00000021465	-	88	80.952	Mola_mola
ENSPLAG00000000061	-	79	74.510	ENSMALG00000007520	-	83	72.510	Monopterus_albus
ENSPLAG00000000061	-	82	86.415	ENSMALG00000014623	-	84	87.547	Monopterus_albus
ENSPLAG00000000061	-	65	54.667	ENSMUSG00000039717	Ralyl	91	76.623	Mus_musculus
ENSPLAG00000000061	-	65	56.951	ENSMPUG00000010724	RALYL	74	54.751	Mustela_putorius_furo
ENSPLAG00000000061	-	65	54.667	ENSNGAG00000013375	Ralyl	74	54.751	Nannospalax_galili
ENSPLAG00000000061	-	79	81.395	ENSNBRG00000004912	-	92	79.018	Neolamprologus_brichardi
ENSPLAG00000000061	-	100	86.769	ENSNBRG00000015676	-	100	84.923	Neolamprologus_brichardi
ENSPLAG00000000061	-	65	57.277	ENSNLEG00000002702	RALYL	70	57.895	Nomascus_leucogenys
ENSPLAG00000000061	-	55	50.521	ENSOPRG00000013650	-	98	47.895	Ochotona_princeps
ENSPLAG00000000061	-	65	54.464	ENSODEG00000001012	RALYL	74	55.000	Octodon_degus
ENSPLAG00000000061	-	100	84.308	ENSONIG00000018350	-	100	84.615	Oreochromis_niloticus
ENSPLAG00000000061	-	86	75.801	ENSONIG00000007859	-	90	81.226	Oreochromis_niloticus
ENSPLAG00000000061	-	78	72.941	ENSORLG00000009999	-	82	70.980	Oryzias_latipes
ENSPLAG00000000061	-	100	86.364	ENSORLG00000003144	-	100	86.364	Oryzias_latipes
ENSPLAG00000000061	-	78	72.549	ENSORLG00020018228	hnrnpc	82	70.588	Oryzias_latipes_hni
ENSPLAG00000000061	-	100	86.350	ENSORLG00015009460	-	100	86.350	Oryzias_latipes_hsok
ENSPLAG00000000061	-	78	72.941	ENSORLG00015019755	-	82	70.980	Oryzias_latipes_hsok
ENSPLAG00000000061	-	78	74.510	ENSOMEG00000020488	-	81	72.157	Oryzias_melastigma
ENSPLAG00000000061	-	100	89.815	ENSOMEG00000022665	-	100	91.049	Oryzias_melastigma
ENSPLAG00000000061	-	65	57.277	ENSPPAG00000038705	RALYL	73	57.895	Pan_paniscus
ENSPLAG00000000061	-	65	60.094	ENSPPRG00000018612	RALYL	73	57.820	Panthera_pardus
ENSPLAG00000000061	-	65	60.094	ENSPTIG00000020331	RALYL	73	57.820	Panthera_tigris_altaica
ENSPLAG00000000061	-	65	57.277	ENSPTRG00000020381	RALYL	73	57.895	Pan_troglodytes
ENSPLAG00000000061	-	65	57.277	ENSPANG00000029305	RALYL	73	57.895	Papio_anubis
ENSPLAG00000000061	-	100	73.333	ENSPKIG00000008592	-	96	74.367	Paramormyrops_kingsleyae
ENSPLAG00000000061	-	81	77.239	ENSPKIG00000022837	-	96	76.899	Paramormyrops_kingsleyae
ENSPLAG00000000061	-	65	55.605	ENSPSIG00000011135	RALYL	74	55.204	Pelodiscus_sinensis
ENSPLAG00000000061	-	69	89.140	ENSPMGG00000013144	-	98	65.359	Periophthalmus_magnuspinnatus
ENSPLAG00000000061	-	95	60.984	ENSPMGG00000017774	-	92	65.022	Periophthalmus_magnuspinnatus
ENSPLAG00000000061	-	65	54.667	ENSPEMG00000016447	Ralyl	74	54.751	Peromyscus_maniculatus_bairdii
ENSPLAG00000000061	-	65	54.867	ENSPMAG00000002407	RALYL	96	54.054	Petromyzon_marinus
ENSPLAG00000000061	-	100	99.688	ENSPFOG00000002643	-	100	99.688	Poecilia_formosa
ENSPLAG00000000061	-	86	75.618	ENSPFOG00000001583	-	82	78.346	Poecilia_formosa
ENSPLAG00000000061	-	100	99.065	ENSPMEG00000016524	-	100	99.065	Poecilia_mexicana
ENSPLAG00000000061	-	86	77.113	ENSPMEG00000004802	-	82	78.346	Poecilia_mexicana
ENSPLAG00000000061	-	90	98.270	ENSPREG00000001852	-	97	98.270	Poecilia_reticulata
ENSPLAG00000000061	-	78	77.559	ENSPREG00000007928	-	82	76.772	Poecilia_reticulata
ENSPLAG00000000061	-	69	52.542	ENSPVAG00000010821	RALYL	78	53.017	Pteropus_vampyrus
ENSPLAG00000000061	-	98	73.968	ENSPNYG00000003747	-	90	89.888	Pundamilia_nyererei
ENSPLAG00000000061	-	79	81.783	ENSPNYG00000020293	-	86	79.842	Pundamilia_nyererei
ENSPLAG00000000061	-	76	78.947	ENSPNAG00000015686	hnrnpc	89	77.736	Pygocentrus_nattereri
ENSPLAG00000000061	-	82	73.606	ENSPNAG00000019200	zgc:55733	81	74.118	Pygocentrus_nattereri
ENSPLAG00000000061	-	65	57.277	ENSRROG00000023925	RALYL	78	77.922	Rhinopithecus_roxellana
ENSPLAG00000000061	-	87	75.862	ENSSFOG00015012924	-	82	96.296	Scleropages_formosus
ENSPLAG00000000061	-	82	75.646	ENSSFOG00015012015	-	81	84.507	Scleropages_formosus
ENSPLAG00000000061	-	76	81.124	ENSSMAG00000013592	-	79	79.518	Scophthalmus_maximus
ENSPLAG00000000061	-	100	82.154	ENSSMAG00000011147	-	96	87.025	Scophthalmus_maximus
ENSPLAG00000000061	-	100	84.520	ENSSDUG00000006730	-	100	82.043	Seriola_dumerili
ENSPLAG00000000061	-	87	79.152	ENSSDUG00000001723	-	81	81.818	Seriola_dumerili
ENSPLAG00000000061	-	84	80.657	ENSSLDG00000007454	-	82	82.213	Seriola_lalandi_dorsalis
ENSPLAG00000000061	-	82	87.170	ENSSLDG00000007474	-	92	87.170	Seriola_lalandi_dorsalis
ENSPLAG00000000061	-	100	86.957	ENSSPAG00000013996	-	100	88.509	Stegastes_partitus
ENSPLAG00000000061	-	85	80.645	ENSSPAG00000023204	-	81	82.609	Stegastes_partitus
ENSPLAG00000000061	-	85	46.735	ENSTGUG00000011689	RALYL	79	53.913	Taeniopygia_guttata
ENSPLAG00000000061	-	82	79.167	ENSTRUG00000020158	-	82	76.494	Takifugu_rubripes
ENSPLAG00000000061	-	78	79.447	ENSTNIG00000000334	-	93	77.734	Tetraodon_nigroviridis
ENSPLAG00000000061	-	79	78.764	ENSTNIG00000007427	-	83	78.824	Tetraodon_nigroviridis
ENSPLAG00000000061	-	65	49.123	ENSTBEG00000005551	RALYL	86	50.228	Tupaia_belangeri
ENSPLAG00000000061	-	65	54.128	ENSTTRG00000015762	RALYL	74	53.953	Tursiops_truncatus
ENSPLAG00000000061	-	65	54.245	ENSVPAG00000008501	RALYL	74	53.081	Vicugna_pacos
ENSPLAG00000000061	-	88	69.416	ENSXCOG00000006552	-	90	67.708	Xiphophorus_couchianus
ENSPLAG00000000061	-	86	76.408	ENSXMAG00000009333	-	82	76.378	Xiphophorus_maculatus
ENSPLAG00000000061	-	90	97.924	ENSXMAG00000022849	-	95	97.924	Xiphophorus_maculatus