EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000000232 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 1929 bases
Position: chrKQ545326.1:174795-176723
Accession: 106945893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000007876	RRM_1	PF00076.22	6.9e-21	1	2
ENSPLAP00000007876	RRM_1	PF00076.22	6.9e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003837	-	1245	XM_015029898	ENSPLAP00000007876	414 (aa)	XP_014885384	-

Gene Model

Click here to download ENSPLAG00000000232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000232	zgc:153215	96	48.449	ENSAPOG00000008836	zgc:153215	95	48.449	Acanthochromis_polyacanthus
ENSPLAG00000000232	zgc:153215	99	31.087	ENSACIG00000014943	rbm12b	97	33.841	Amphilophus_citrinellus
ENSPLAG00000000232	zgc:153215	98	47.942	ENSACIG00000013317	zgc:153215	99	47.942	Amphilophus_citrinellus
ENSPLAG00000000232	zgc:153215	99	44.242	ENSAOCG00000010819	zgc:153215	99	44.242	Amphiprion_ocellaris
ENSPLAG00000000232	zgc:153215	99	36.607	ENSAPEG00000022079	rbm12b	99	33.025	Amphiprion_percula
ENSPLAG00000000232	zgc:153215	99	67.606	ENSATEG00000001886	zgc:153215	81	67.606	Anabas_testudineus
ENSPLAG00000000232	zgc:153215	99	30.992	ENSATEG00000004578	rbm12b	73	30.992	Anabas_testudineus
ENSPLAG00000000232	zgc:153215	97	51.948	ENSAPLG00000002020	RBM12B	62	51.948	Anas_platyrhynchos
ENSPLAG00000000232	zgc:153215	99	51.818	ENSACLG00000007675	zgc:153215	90	51.818	Astatotilapia_calliptera
ENSPLAG00000000232	zgc:153215	91	59.155	ENSAMXG00000020853	zgc:153215	66	59.155	Astyanax_mexicanus
ENSPLAG00000000232	zgc:153215	93	53.247	ENSCPBG00000003061	RBM12B	60	53.247	Chrysemys_picta_bellii
ENSPLAG00000000232	zgc:153215	80	50.857	ENSCSEG00000001575	-	99	50.857	Cynoglossus_semilaevis
ENSPLAG00000000232	zgc:153215	99	30.498	ENSCSEG00000004610	rbm12b	69	30.498	Cynoglossus_semilaevis
ENSPLAG00000000232	zgc:153215	99	59.223	ENSCVAG00000009259	-	100	59.223	Cyprinodon_variegatus
ENSPLAG00000000232	zgc:153215	90	57.353	ENSDARG00000055889	zgc:153215	77	57.353	Danio_rerio
ENSPLAG00000000232	zgc:153215	93	70.423	ENSELUG00000009039	zgc:153215	97	33.511	Esox_lucius
ENSPLAG00000000232	zgc:153215	97	59.322	ENSFHEG00000014539	zgc:153215	96	54.402	Fundulus_heteroclitus
ENSPLAG00000000232	zgc:153215	97	50.649	ENSGALG00000035129	RBM12B	59	50.649	Gallus_gallus
ENSPLAG00000000232	zgc:153215	99	81.842	ENSGAFG00000007845	zgc:153215	99	81.842	Gambusia_affinis
ENSPLAG00000000232	zgc:153215	93	53.247	ENSGAGG00000009774	RBM12B	60	53.247	Gopherus_agassizii
ENSPLAG00000000232	zgc:153215	99	51.818	ENSHBUG00000016150	zgc:153215	84	51.818	Haplochromis_burtoni
ENSPLAG00000000232	zgc:153215	95	52.703	ENSIPUG00000019731	zgc:153215	78	52.703	Ictalurus_punctatus
ENSPLAG00000000232	zgc:153215	99	45.607	ENSKMAG00000004958	zgc:153215	99	45.607	Kryptolebias_marmoratus
ENSPLAG00000000232	zgc:153215	99	49.896	ENSLBEG00000002597	zgc:153215	99	49.896	Labrus_bergylta
ENSPLAG00000000232	zgc:153215	92	54.545	ENSLACG00000007177	RBM12B	60	54.545	Latimeria_chalumnae
ENSPLAG00000000232	zgc:153215	99	30.140	ENSLAFG00000029949	RBM12B	57	30.140	Loxodonta_africana
ENSPLAG00000000232	zgc:153215	99	67.606	ENSMAMG00000012038	zgc:153215	85	67.606	Mastacembelus_armatus
ENSPLAG00000000232	zgc:153215	99	30.833	ENSMAMG00000011998	rbm12b	74	30.833	Mastacembelus_armatus
ENSPLAG00000000232	zgc:153215	99	51.818	ENSMZEG00005005435	zgc:153215	84	51.818	Maylandia_zebra
ENSPLAG00000000232	zgc:153215	99	52.439	ENSMMOG00000003372	zgc:153215	99	52.439	Mola_mola
ENSPLAG00000000232	zgc:153215	99	47.222	ENSMALG00000001222	zgc:153215	99	47.222	Monopterus_albus
ENSPLAG00000000232	zgc:153215	99	30.208	ENSMALG00000012059	rbm12b	73	30.208	Monopterus_albus
ENSPLAG00000000232	zgc:153215	99	51.818	ENSNBRG00000013644	zgc:153215	84	51.818	Neolamprologus_brichardi
ENSPLAG00000000232	zgc:153215	93	66.197	ENSONIG00000006054	zgc:153215	89	52.727	Oreochromis_niloticus
ENSPLAG00000000232	zgc:153215	99	31.237	ENSORLG00000008228	rbm12b	71	31.237	Oryzias_latipes
ENSPLAG00000000232	zgc:153215	99	31.237	ENSORLG00020013619	rbm12b	71	31.237	Oryzias_latipes_hni
ENSPLAG00000000232	zgc:153215	99	31.237	ENSORLG00015019999	rbm12b	71	31.237	Oryzias_latipes_hsok
ENSPLAG00000000232	zgc:153215	99	46.256	ENSOMEG00000004220	zgc:153215	96	46.018	Oryzias_melastigma
ENSPLAG00000000232	zgc:153215	99	31.176	ENSPKIG00000014851	zgc:153215	99	31.176	Paramormyrops_kingsleyae
ENSPLAG00000000232	zgc:153215	97	53.247	ENSPSIG00000001348	RBM12B	63	53.247	Pelodiscus_sinensis
ENSPLAG00000000232	zgc:153215	69	30.887	ENSPMGG00000012348	-	94	31.193	Periophthalmus_magnuspinnatus
ENSPLAG00000000232	zgc:153215	92	54.545	ENSPCIG00000008556	RBM12B	67	30.326	Phascolarctos_cinereus
ENSPLAG00000000232	zgc:153215	99	80.100	ENSPFOG00000017451	zgc:153215	80	80.100	Poecilia_formosa
ENSPLAG00000000232	zgc:153215	100	92.654	ENSPMEG00000016662	zgc:153215	100	92.654	Poecilia_mexicana
ENSPLAG00000000232	zgc:153215	100	82.672	ENSPREG00000018608	zgc:153215	100	82.046	Poecilia_reticulata
ENSPLAG00000000232	zgc:153215	99	48.402	ENSPNYG00000018125	zgc:153215	97	48.402	Pundamilia_nyererei
ENSPLAG00000000232	zgc:153215	92	60.563	ENSPNAG00000025628	zgc:153215	74	60.563	Pygocentrus_nattereri
ENSPLAG00000000232	zgc:153215	92	54.545	ENSSHAG00000015335	RBM12B	67	30.134	Sarcophilus_harrisii
ENSPLAG00000000232	zgc:153215	99	30.315	ENSSFOG00015001584	rbm12b	74	30.315	Scleropages_formosus
ENSPLAG00000000232	zgc:153215	99	33.996	ENSSFOG00015009427	zgc:153215	99	33.996	Scleropages_formosus
ENSPLAG00000000232	zgc:153215	100	47.718	ENSSMAG00000019013	zgc:153215	97	47.718	Scophthalmus_maximus
ENSPLAG00000000232	zgc:153215	99	30.321	ENSSMAG00000019708	rbm12b	74	30.321	Scophthalmus_maximus
ENSPLAG00000000232	zgc:153215	99	48.148	ENSSDUG00000012545	zgc:153215	98	48.148	Seriola_dumerili
ENSPLAG00000000232	zgc:153215	99	66.197	ENSSLDG00000013581	zgc:153215	83	66.197	Seriola_lalandi_dorsalis
ENSPLAG00000000232	zgc:153215	92	51.948	ENSSPUG00000016954	RBM12B	74	51.948	Sphenodon_punctatus
ENSPLAG00000000232	zgc:153215	99	45.217	ENSSPAG00000023584	zgc:153215	98	45.217	Stegastes_partitus
ENSPLAG00000000232	zgc:153215	81	42.748	ENSTNIG00000018374	-	99	42.748	Tetraodon_nigroviridis
ENSPLAG00000000232	zgc:153215	99	78.870	ENSXCOG00000019654	zgc:153215	98	75.105	Xiphophorus_couchianus
ENSPLAG00000000232	zgc:153215	69	30.312	ENSXCOG00000019735	-	99	30.938	Xiphophorus_couchianus
ENSPLAG00000000232	zgc:153215	99	74.286	ENSXMAG00000013169	-	97	74.286	Xiphophorus_maculatus