EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000403 (Gene tree)
Gene ID: 106946892
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 11274 bases
Position: chrKQ545526.1:292994-304267
Accession: 106946892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028319	DEAD	PF00270.29	3e-42	1	1
ENSPLAP00000013995	DEAD	PF00270.29	1.2e-25	1	2
ENSPLAP00000013995	DEAD	PF00270.29	1.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022177	-	1299	-	ENSPLAP00000013995	432 (aa)	-	-
ENSPLAT00000030146	-	5121	XM_015031570	ENSPLAP00000028319	481 (aa)	XP_014887056	UPI0004438783

Gene Model

Click here to download ENSPLAG00000000403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000403	-	74	30.707	ENSPLAG00000011231	DDX41	59	31.165
ENSPLAG00000000403	-	80	32.663	ENSPLAG00000009925	ddx20	51	32.663
ENSPLAG00000000403	-	77	31.043	ENSPLAG00000005920	-	60	31.043
ENSPLAG00000000403	-	78	37.566	ENSPLAG00000007436	eif4a3	92	37.566
ENSPLAG00000000403	-	80	31.954	ENSPLAG00000005052	ddx23	54	31.963
ENSPLAG00000000403	-	55	30.147	ENSPLAG00000010940	ddx24	55	30.147
ENSPLAG00000000403	-	73	33.240	ENSPLAG00000016185	ddx49	75	33.240
ENSPLAG00000000403	-	82	35.338	ENSPLAG00000009821	DDX39A	93	35.338
ENSPLAG00000000403	-	77	39.247	ENSPLAG00000018728	eif4a1b	92	39.247
ENSPLAG00000000403	-	66	39.344	ENSPLAG00000020726	ddx4	56	31.148
ENSPLAG00000000403	-	74	30.295	ENSPLAG00000005210	ddx18	70	30.295
ENSPLAG00000000403	-	73	31.667	ENSPLAG00000006320	-	54	31.944
ENSPLAG00000000403	-	72	40.741	ENSPLAG00000006604	-	64	31.818
ENSPLAG00000000403	-	82	35.088	ENSPLAG00000008645	-	93	35.088
ENSPLAG00000000403	-	76	36.649	ENSPLAG00000019100	zgc:193690	79	37.398
ENSPLAG00000000403	-	72	30.618	ENSPLAG00000013054	DDX5	56	30.618
ENSPLAG00000000403	-	69	30.141	ENSPLAG00000014735	ddx55	60	30.986
ENSPLAG00000000403	-	72	36.212	ENSPLAG00000004378	ddx19	72	36.212
ENSPLAG00000000403	-	77	40.323	ENSPLAG00000007805	eif4a2	90	40.323
ENSPLAG00000000403	-	96	82.563	ENSPLAG00000019684	ddx6	98	82.563
ENSPLAG00000000403	-	70	40.678	ENSPLAG00000005939	ddx1	53	40.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000403	-	78	96.000	ENSAPOG00000023627	-	95	96.000	Acanthochromis_polyacanthus
ENSPLAG00000000403	-	98	86.542	ENSAPOG00000014829	ddx61	99	86.542	Acanthochromis_polyacanthus
ENSPLAG00000000403	-	100	85.685	ENSACIG00000018355	-	100	85.685	Amphilophus_citrinellus
ENSPLAG00000000403	-	100	92.245	ENSAOCG00000006269	-	100	92.843	Amphiprion_ocellaris
ENSPLAG00000000403	-	98	87.344	ENSAOCG00000007627	ddx61	99	87.344	Amphiprion_ocellaris
ENSPLAG00000000403	-	100	92.245	ENSAPEG00000020642	-	100	92.843	Amphiprion_percula
ENSPLAG00000000403	-	100	92.245	ENSAPEG00000021368	-	100	92.843	Amphiprion_percula
ENSPLAG00000000403	-	98	87.344	ENSAPEG00000007293	ddx61	99	87.344	Amphiprion_percula
ENSPLAG00000000403	-	98	86.639	ENSATEG00000011302	ddx61	99	86.639	Anabas_testudineus
ENSPLAG00000000403	-	100	91.616	ENSATEG00000005424	-	100	91.616	Anabas_testudineus
ENSPLAG00000000403	-	100	92.886	ENSACLG00000003260	-	100	92.886	Astatotilapia_calliptera
ENSPLAG00000000403	-	98	86.875	ENSACLG00000027620	ddx61	99	86.875	Astatotilapia_calliptera
ENSPLAG00000000403	-	98	89.441	ENSAMXG00000033980	-	98	89.441	Astyanax_mexicanus
ENSPLAG00000000403	-	96	88.034	ENSAMXG00000032542	ddx61	99	85.979	Astyanax_mexicanus
ENSPLAG00000000403	-	100	90.650	ENSCSEG00000009893	-	100	90.650	Cynoglossus_semilaevis
ENSPLAG00000000403	-	100	96.266	ENSCVAG00000011006	-	100	96.266	Cyprinodon_variegatus
ENSPLAG00000000403	-	98	86.279	ENSDARG00000018425	ddx61	99	86.279	Danio_rerio
ENSPLAG00000000403	-	96	89.574	ENSELUG00000020545	ddx61	96	89.574	Esox_lucius
ENSPLAG00000000403	-	99	88.548	ENSELUG00000022538	-	99	88.548	Esox_lucius
ENSPLAG00000000403	-	100	96.473	ENSFHEG00000015487	-	100	96.473	Fundulus_heteroclitus
ENSPLAG00000000403	-	96	87.686	ENSGMOG00000013762	ddx61	100	86.486	Gadus_morhua
ENSPLAG00000000403	-	66	85.410	ENSGMOG00000003561	-	100	86.850	Gadus_morhua
ENSPLAG00000000403	-	100	99.172	ENSGAFG00000015865	-	100	99.172	Gambusia_affinis
ENSPLAG00000000403	-	99	91.097	ENSGACG00000002413	-	100	91.097	Gasterosteus_aculeatus
ENSPLAG00000000403	-	96	86.920	ENSGACG00000003401	ddx61	98	86.920	Gasterosteus_aculeatus
ENSPLAG00000000403	-	98	87.083	ENSHBUG00000017832	ddx61	99	87.083	Haplochromis_burtoni
ENSPLAG00000000403	-	100	92.886	ENSHBUG00000017033	-	100	92.886	Haplochromis_burtoni
ENSPLAG00000000403	-	100	86.503	ENSHCOG00000012238	-	100	86.503	Hippocampus_comes
ENSPLAG00000000403	-	97	84.926	ENSHCOG00000008184	ddx61	98	84.926	Hippocampus_comes
ENSPLAG00000000403	-	96	88.699	ENSIPUG00000008367	-	99	87.708	Ictalurus_punctatus
ENSPLAG00000000403	-	96	85.961	ENSIPUG00000012823	DDX6	99	84.632	Ictalurus_punctatus
ENSPLAG00000000403	-	100	93.456	ENSKMAG00000007213	-	100	93.456	Kryptolebias_marmoratus
ENSPLAG00000000403	-	100	89.718	ENSLBEG00000016890	-	100	90.380	Labrus_bergylta
ENSPLAG00000000403	-	96	88.085	ENSLBEG00000001740	ddx61	97	88.085	Labrus_bergylta
ENSPLAG00000000403	-	96	85.865	ENSLACG00000015214	ddx61	98	85.865	Latimeria_chalumnae
ENSPLAG00000000403	-	96	51.059	ENSLOCG00000004352	ddx61	95	50.935	Lepisosteus_oculatus
ENSPLAG00000000403	-	100	92.449	ENSMAMG00000005559	-	100	92.449	Mastacembelus_armatus
ENSPLAG00000000403	-	96	89.126	ENSMAMG00000005321	ddx61	96	89.126	Mastacembelus_armatus
ENSPLAG00000000403	-	98	87.083	ENSMZEG00005003556	ddx61	99	87.083	Maylandia_zebra
ENSPLAG00000000403	-	100	92.886	ENSMZEG00005026268	-	100	92.886	Maylandia_zebra
ENSPLAG00000000403	-	73	76.487	ENSMMOG00000008825	-	92	76.487	Mola_mola
ENSPLAG00000000403	-	100	91.364	ENSMMOG00000013694	-	100	91.364	Mola_mola
ENSPLAG00000000403	-	97	87.131	ENSMMOG00000007415	ddx61	98	87.131	Mola_mola
ENSPLAG00000000403	-	97	76.091	ENSMALG00000013776	ddx61	96	76.091	Monopterus_albus
ENSPLAG00000000403	-	100	91.616	ENSMALG00000013817	-	100	91.616	Monopterus_albus
ENSPLAG00000000403	-	100	86.382	ENSNBRG00000015075	-	100	86.382	Neolamprologus_brichardi
ENSPLAG00000000403	-	98	80.208	ENSNBRG00000015800	ddx61	99	80.208	Neolamprologus_brichardi
ENSPLAG00000000403	-	100	93.089	ENSONIG00000013748	-	100	93.089	Oreochromis_niloticus
ENSPLAG00000000403	-	98	87.083	ENSONIG00000011418	ddx61	99	87.083	Oreochromis_niloticus
ENSPLAG00000000403	-	100	91.572	ENSORLG00000009178	-	100	91.572	Oryzias_latipes
ENSPLAG00000000403	-	100	92.027	ENSORLG00020015515	-	100	92.027	Oryzias_latipes_hni
ENSPLAG00000000403	-	100	91.800	ENSORLG00015006764	-	100	91.800	Oryzias_latipes_hsok
ENSPLAG00000000403	-	97	92.974	ENSOMEG00000022326	-	99	92.974	Oryzias_melastigma
ENSPLAG00000000403	-	96	90.094	ENSPKIG00000024264	ddx61	98	89.004	Paramormyrops_kingsleyae
ENSPLAG00000000403	-	100	81.856	ENSPMGG00000013355	-	100	81.856	Periophthalmus_magnuspinnatus
ENSPLAG00000000403	-	100	100.000	ENSPFOG00000005750	-	100	100.000	Poecilia_formosa
ENSPLAG00000000403	-	100	99.376	ENSPMEG00000023737	-	100	99.376	Poecilia_mexicana
ENSPLAG00000000403	-	98	80.851	ENSPNYG00000015045	ddx61	99	80.851	Pundamilia_nyererei
ENSPLAG00000000403	-	100	92.886	ENSPNYG00000003986	-	100	92.886	Pundamilia_nyererei
ENSPLAG00000000403	-	98	86.875	ENSPNAG00000024072	ddx61	99	86.875	Pygocentrus_nattereri
ENSPLAG00000000403	-	98	89.027	ENSPNAG00000008742	-	98	89.027	Pygocentrus_nattereri
ENSPLAG00000000403	-	96	89.831	ENSSFOG00015021404	ddx61	99	87.551	Scleropages_formosus
ENSPLAG00000000403	-	96	86.966	ENSSMAG00000006591	ddx61	97	86.105	Scophthalmus_maximus
ENSPLAG00000000403	-	100	90.798	ENSSMAG00000001793	-	100	90.798	Scophthalmus_maximus
ENSPLAG00000000403	-	96	88.889	ENSSDUG00000009713	ddx61	99	87.526	Seriola_dumerili
ENSPLAG00000000403	-	100	92.449	ENSSDUG00000007530	-	100	92.449	Seriola_dumerili
ENSPLAG00000000403	-	96	88.699	ENSSLDG00000000132	ddx61	99	87.344	Seriola_lalandi_dorsalis
ENSPLAG00000000403	-	100	92.449	ENSSLDG00000007608	-	100	92.449	Seriola_lalandi_dorsalis
ENSPLAG00000000403	-	96	88.248	ENSSPAG00000001578	ddx61	99	87.110	Stegastes_partitus
ENSPLAG00000000403	-	100	93.661	ENSSPAG00000013878	-	100	93.661	Stegastes_partitus
ENSPLAG00000000403	-	99	86.885	ENSTRUG00000012432	-	99	87.398	Takifugu_rubripes
ENSPLAG00000000403	-	98	89.353	ENSTNIG00000003560	-	100	89.353	Tetraodon_nigroviridis
ENSPLAG00000000403	-	100	99.539	ENSXCOG00000001406	-	100	99.539	Xiphophorus_couchianus
ENSPLAG00000000403	-	100	99.586	ENSXMAG00000016090	-	100	99.586	Xiphophorus_maculatus