EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000406 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3009 bases
Position: chrKQ550146.1:4471-7479
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000014090	MMR_HSR1	PF01926.23	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000030182	-	1617	-	ENSPLAP00000014090	538 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000000406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000406's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000406	-	93	31.311	ENSPLAG00000004493	-	92	31.311
ENSPLAG00000000406	-	84	33.189	ENSPLAG00000002572	-	96	33.189
ENSPLAG00000000406	-	94	30.039	ENSPLAG00000018528	-	93	30.039
ENSPLAG00000000406	-	93	32.039	ENSPLAG00000018524	-	93	32.039
ENSPLAG00000000406	-	98	63.364	ENSPLAG00000010093	-	70	63.364
ENSPLAG00000000406	-	95	33.019	ENSPLAG00000006609	-	93	33.019
ENSPLAG00000000406	-	92	31.712	ENSPLAG00000018499	-	91	31.712
ENSPLAG00000000406	-	94	87.819	ENSPLAG00000005002	-	99	87.819

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000406	-	98	55.283	ENSAPOG00000015784	-	87	55.283	Acanthochromis_polyacanthus
ENSPLAG00000000406	-	90	57.084	ENSAPOG00000015792	-	87	57.084	Acanthochromis_polyacanthus
ENSPLAG00000000406	-	91	63.232	ENSACIG00000022228	-	84	63.232	Amphilophus_citrinellus
ENSPLAG00000000406	-	99	62.873	ENSACIG00000009923	-	87	63.060	Amphilophus_citrinellus
ENSPLAG00000000406	-	99	57.914	ENSAOCG00000015171	-	50	57.914	Amphiprion_ocellaris
ENSPLAG00000000406	-	99	57.974	ENSAPEG00000005793	-	99	57.974	Amphiprion_percula
ENSPLAG00000000406	-	99	61.381	ENSATEG00000009097	-	91	61.381	Anabas_testudineus
ENSPLAG00000000406	-	99	61.121	ENSACLG00000023474	-	97	61.495	Astatotilapia_calliptera
ENSPLAG00000000406	-	99	60.781	ENSACLG00000023481	-	97	60.781	Astatotilapia_calliptera
ENSPLAG00000000406	-	99	76.360	ENSCVAG00000018327	-	91	76.360	Cyprinodon_variegatus
ENSPLAG00000000406	-	99	76.648	ENSFHEG00000011074	-	83	76.648	Fundulus_heteroclitus
ENSPLAG00000000406	-	99	62.825	ENSFHEG00000021969	-	97	62.825	Fundulus_heteroclitus
ENSPLAG00000000406	-	99	76.623	ENSFHEG00000008149	-	83	76.623	Fundulus_heteroclitus
ENSPLAG00000000406	-	99	60.074	ENSHBUG00000012995	-	97	60.444	Haplochromis_burtoni
ENSPLAG00000000406	-	99	61.710	ENSHBUG00000021307	-	97	61.710	Haplochromis_burtoni
ENSPLAG00000000406	-	98	65.112	ENSKMAG00000016903	-	72	65.112	Kryptolebias_marmoratus
ENSPLAG00000000406	-	98	65.160	ENSKMAG00000016981	-	85	65.160	Kryptolebias_marmoratus
ENSPLAG00000000406	-	94	43.504	ENSLACG00000008367	-	99	44.094	Latimeria_chalumnae
ENSPLAG00000000406	-	98	59.963	ENSMAMG00000015216	-	96	59.963	Mastacembelus_armatus
ENSPLAG00000000406	-	98	59.590	ENSMAMG00000015097	-	96	59.590	Mastacembelus_armatus
ENSPLAG00000000406	-	98	60.894	ENSMAMG00000015247	-	96	60.894	Mastacembelus_armatus
ENSPLAG00000000406	-	99	60.935	ENSMZEG00005020274	-	97	61.308	Maylandia_zebra
ENSPLAG00000000406	-	98	61.049	ENSMZEG00005020281	-	90	61.049	Maylandia_zebra
ENSPLAG00000000406	-	97	59.738	ENSNBRG00000016799	-	94	60.112	Neolamprologus_brichardi
ENSPLAG00000000406	-	92	62.076	ENSNBRG00000016760	-	99	62.076	Neolamprologus_brichardi
ENSPLAG00000000406	-	93	63.022	ENSNBRG00000022932	-	90	63.022	Neolamprologus_brichardi
ENSPLAG00000000406	-	89	63.430	ENSONIG00000012363	-	99	63.430	Oreochromis_niloticus
ENSPLAG00000000406	-	98	52.710	ENSPKIG00000009271	-	89	53.084	Paramormyrops_kingsleyae
ENSPLAG00000000406	-	99	51.859	ENSPKIG00000011996	-	94	52.045	Paramormyrops_kingsleyae
ENSPLAG00000000406	-	80	49.697	ENSPMGG00000000605	-	87	49.697	Periophthalmus_magnuspinnatus
ENSPLAG00000000406	-	98	63.346	ENSPFOG00000010758	-	83	63.346	Poecilia_formosa
ENSPLAG00000000406	-	99	98.699	ENSPMEG00000014712	-	83	98.699	Poecilia_mexicana
ENSPLAG00000000406	-	100	87.037	ENSPMEG00000015576	-	51	87.037	Poecilia_mexicana
ENSPLAG00000000406	-	95	62.282	ENSPREG00000021204	-	96	62.669	Poecilia_reticulata
ENSPLAG00000000406	-	98	59.475	ENSSMAG00000004663	-	87	59.475	Scophthalmus_maximus
ENSPLAG00000000406	-	94	60.624	ENSSDUG00000004257	-	93	60.624	Seriola_dumerili
ENSPLAG00000000406	-	97	59.696	ENSSLDG00000021625	-	94	59.696	Seriola_lalandi_dorsalis
ENSPLAG00000000406	-	99	61.710	ENSSPAG00000003320	-	91	61.896	Stegastes_partitus
ENSPLAG00000000406	-	93	90.180	ENSXMAG00000023457	-	96	90.180	Xiphophorus_maculatus
ENSPLAG00000000406	-	99	89.591	ENSXMAG00000022709	-	83	89.591	Xiphophorus_maculatus