EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000436 (Gene tree)
Gene ID: -
Gene Symbol: msi2a (1 of many)
Alias: -
Full Name: RNA-binding protein Musashi homolog 2-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 95851 bases
Position: chrKQ546157.1:126278-222128
Accession: 106956760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029350	RRM_1	PF00076.22	4e-23	1	1
ENSPLAP00000015554	RRM_1	PF00076.22	5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024249	-	846	XM_015047786	ENSPLAP00000029350	188 (aa)	XP_014903272	-
ENSPLAT00000024239	-	804	-	ENSPLAP00000015554	174 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000000436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000436	msi2a	65	44.167	ENSPLAG00000013254	hnrnpa1b	74	44.167
ENSPLAG00000000436	msi2a	54	30.769	ENSPLAG00000016709	-	50	30.769
ENSPLAG00000000436	msi2a	75	50.000	ENSPLAG00000019814	-	64	50.000
ENSPLAG00000000436	msi2a	73	49.286	ENSPLAG00000009450	hnrnpaba	57	49.286
ENSPLAG00000000436	msi2a	74	47.857	ENSPLAG00000004297	hnrnpd	57	47.857
ENSPLAG00000000436	msi2a	72	77.206	ENSPLAG00000014025	-	54	81.739
ENSPLAG00000000436	msi2a	61	43.590	ENSPLAG00000009033	HNRNPA3	59	43.590
ENSPLAG00000000436	msi2a	64	35.772	ENSPLAG00000015223	-	57	35.772
ENSPLAG00000000436	msi2a	72	75.182	ENSPLAG00000012431	-	53	75.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000436	msi2a	76	90.845	ENSG00000153944	MSI2	100	82.828	Homo_sapiens
ENSPLAG00000000436	msi2a	76	96.479	ENSAPOG00000001658	msi2a	62	100.000	Acanthochromis_polyacanthus
ENSPLAG00000000436	msi2a	64	92.562	ENSAMEG00000002697	MSI2	52	91.803	Ailuropoda_melanoleuca
ENSPLAG00000000436	msi2a	85	78.916	ENSAOCG00000014822	msi2a	77	78.916	Amphiprion_ocellaris
ENSPLAG00000000436	msi2a	72	100.000	ENSAPEG00000007706	msi2a	55	100.000	Amphiprion_percula
ENSPLAG00000000436	msi2a	64	89.130	ENSATEG00000003301	-	50	88.172	Anabas_testudineus
ENSPLAG00000000436	msi2a	76	96.479	ENSATEG00000010498	msi2a	62	100.000	Anabas_testudineus
ENSPLAG00000000436	msi2a	76	90.845	ENSANAG00000037827	MSI2	67	96.522	Aotus_nancymaae
ENSPLAG00000000436	msi2a	72	100.000	ENSACLG00000007752	msi2a	62	100.000	Astatotilapia_calliptera
ENSPLAG00000000436	msi2a	76	92.958	ENSAMXG00000032796	msi2a	58	92.958	Astyanax_mexicanus
ENSPLAG00000000436	msi2a	76	92.958	ENSAMXG00000010474	msi2b	56	93.388	Astyanax_mexicanus
ENSPLAG00000000436	msi2a	76	88.028	ENSBTAG00000004406	MSI2	59	87.413	Bos_taurus
ENSPLAG00000000436	msi2a	76	61.972	WBGene00003423	msi-1	69	61.538	Caenorhabditis_elegans
ENSPLAG00000000436	msi2a	76	90.845	ENSCJAG00000013998	MSI2	67	96.522	Callithrix_jacchus
ENSPLAG00000000436	msi2a	61	95.960	ENSCAFG00020025620	MSI2	54	92.661	Canis_lupus_dingo
ENSPLAG00000000436	msi2a	76	88.028	ENSCHIG00000016580	MSI2	58	87.413	Capra_hircus
ENSPLAG00000000436	msi2a	64	77.895	ENSCPOG00000034042	MSI2	51	76.289	Cavia_porcellus
ENSPLAG00000000436	msi2a	76	90.845	ENSCCAG00000033927	MSI2	67	96.522	Cebus_capucinus
ENSPLAG00000000436	msi2a	70	92.366	ENSCATG00000040879	MSI2	67	96.522	Cercocebus_atys
ENSPLAG00000000436	msi2a	76	90.845	ENSCLAG00000014325	MSI2	87	87.500	Chinchilla_lanigera
ENSPLAG00000000436	msi2a	76	90.845	ENSCSAG00000005633	MSI2	58	90.210	Chlorocebus_sabaeus
ENSPLAG00000000436	msi2a	61	78.000	ENSCHOG00000008660	MSI2	55	78.000	Choloepus_hoffmanni
ENSPLAG00000000436	msi2a	61	96.000	ENSCPBG00000009942	MSI2	58	96.000	Chrysemys_picta_bellii
ENSPLAG00000000436	msi2a	66	63.910	ENSCSAVG00000010397	-	58	63.433	Ciona_savignyi
ENSPLAG00000000436	msi2a	61	96.522	ENSCANG00000036414	MSI2	67	96.522	Colobus_angolensis_palliatus
ENSPLAG00000000436	msi2a	76	90.141	ENSCGRG00001013330	Msi2	74	89.623	Cricetulus_griseus_chok1gshd
ENSPLAG00000000436	msi2a	64	92.562	ENSCGRG00000003141	Msi2	51	91.803	Cricetulus_griseus_crigri
ENSPLAG00000000436	msi2a	73	90.511	ENSCSEG00000003266	-	66	80.769	Cynoglossus_semilaevis
ENSPLAG00000000436	msi2a	74	95.683	ENSCSEG00000013549	msi2a	79	95.683	Cynoglossus_semilaevis
ENSPLAG00000000436	msi2a	76	96.479	ENSCVAG00000017075	msi2a	62	100.000	Cyprinodon_variegatus
ENSPLAG00000000436	msi2a	76	94.366	ENSDARG00000032614	msi2b	100	96.429	Danio_rerio
ENSPLAG00000000436	msi2a	65	90.291	ENSDNOG00000014501	MSI2	52	90.291	Dasypus_novemcinctus
ENSPLAG00000000436	msi2a	60	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSPLAG00000000436	msi2a	70	72.519	FBgn0260943	Rbp6	53	81.250	Drosophila_melanogaster
ENSPLAG00000000436	msi2a	76	90.845	ENSECAG00000011435	MSI2	60	90.210	Equus_caballus
ENSPLAG00000000436	msi2a	76	94.366	ENSELUG00000011747	msi2a	62	86.667	Esox_lucius
ENSPLAG00000000436	msi2a	76	93.007	ENSELUG00000001361	msi2b	80	96.324	Esox_lucius
ENSPLAG00000000436	msi2a	76	90.845	ENSFCAG00000041686	MSI2	100	82.828	Felis_catus
ENSPLAG00000000436	msi2a	76	75.352	ENSFCAG00000033787	-	83	70.874	Felis_catus
ENSPLAG00000000436	msi2a	64	92.562	ENSFDAG00000016118	MSI2	52	91.803	Fukomys_damarensis
ENSPLAG00000000436	msi2a	76	96.479	ENSFHEG00000000084	msi2a	86	100.000	Fundulus_heteroclitus
ENSPLAG00000000436	msi2a	55	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSPLAG00000000436	msi2a	76	89.437	ENSGALG00000005567	MSI2	55	88.811	Gallus_gallus
ENSPLAG00000000436	msi2a	72	100.000	ENSGAFG00000006974	msi2a	81	100.000	Gambusia_affinis
ENSPLAG00000000436	msi2a	61	96.522	ENSGGOG00000013182	MSI2	67	96.522	Gorilla_gorilla
ENSPLAG00000000436	msi2a	76	96.479	ENSHBUG00000020800	msi2a	73	99.265	Haplochromis_burtoni
ENSPLAG00000000436	msi2a	56	91.429	ENSHGLG00000012444	MSI2	76	92.308	Heterocephalus_glaber_female
ENSPLAG00000000436	msi2a	65	90.984	ENSHGLG00100004028	-	93	90.984	Heterocephalus_glaber_male
ENSPLAG00000000436	msi2a	72	99.265	ENSHCOG00000000266	msi2a	54	99.265	Hippocampus_comes
ENSPLAG00000000436	msi2a	76	92.958	ENSIPUG00000003732	msi2b	69	92.308	Ictalurus_punctatus
ENSPLAG00000000436	msi2a	76	90.845	ENSIPUG00000021097	msi2a	62	90.210	Ictalurus_punctatus
ENSPLAG00000000436	msi2a	64	77.895	ENSSTOG00000007884	MSI2	51	76.289	Ictidomys_tridecemlineatus
ENSPLAG00000000436	msi2a	60	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSPLAG00000000436	msi2a	76	95.775	ENSKMAG00000009494	msi2a	58	99.265	Kryptolebias_marmoratus
ENSPLAG00000000436	msi2a	76	96.479	ENSLBEG00000007061	msi2a	88	100.000	Labrus_bergylta
ENSPLAG00000000436	msi2a	52	92.308	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSPLAG00000000436	msi2a	76	94.366	ENSLOCG00000004675	msi2b	100	86.992	Lepisosteus_oculatus
ENSPLAG00000000436	msi2a	58	100.000	ENSMFAG00000003775	MSI2	67	96.522	Macaca_fascicularis
ENSPLAG00000000436	msi2a	58	100.000	ENSMMUG00000002069	MSI2	67	96.522	Macaca_mulatta
ENSPLAG00000000436	msi2a	76	90.845	ENSMNEG00000045275	MSI2	67	96.522	Macaca_nemestrina
ENSPLAG00000000436	msi2a	61	96.522	ENSMLEG00000033888	MSI2	67	96.522	Mandrillus_leucophaeus
ENSPLAG00000000436	msi2a	76	96.479	ENSMAMG00000010503	msi2a	96	88.462	Mastacembelus_armatus
ENSPLAG00000000436	msi2a	76	90.845	ENSMAMG00000002488	-	93	90.210	Mastacembelus_armatus
ENSPLAG00000000436	msi2a	76	96.479	ENSMZEG00005007676	msi2a	62	100.000	Maylandia_zebra
ENSPLAG00000000436	msi2a	76	90.141	ENSMAUG00000003862	Msi2	55	89.510	Mesocricetus_auratus
ENSPLAG00000000436	msi2a	88	71.006	ENSMICG00000032913	-	90	60.145	Microcebus_murinus
ENSPLAG00000000436	msi2a	76	90.845	ENSMICG00000013598	-	67	96.522	Microcebus_murinus
ENSPLAG00000000436	msi2a	76	90.141	ENSMOCG00000005820	Msi2	55	89.510	Microtus_ochrogaster
ENSPLAG00000000436	msi2a	72	88.971	ENSMMOG00000008348	msi2a	90	88.971	Mola_mola
ENSPLAG00000000436	msi2a	76	96.479	ENSMALG00000000071	msi2a	81	98.540	Monopterus_albus
ENSPLAG00000000436	msi2a	76	90.141	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSPLAG00000000436	msi2a	76	90.141	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSPLAG00000000436	msi2a	76	90.141	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSPLAG00000000436	msi2a	76	90.141	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSPLAG00000000436	msi2a	64	92.562	ENSMPUG00000015377	MSI2	52	91.803	Mustela_putorius_furo
ENSPLAG00000000436	msi2a	64	91.736	ENSMLUG00000007865	MSI2	52	90.984	Myotis_lucifugus
ENSPLAG00000000436	msi2a	76	90.141	ENSNGAG00000017807	Msi2	55	89.510	Nannospalax_galili
ENSPLAG00000000436	msi2a	76	96.479	ENSNBRG00000014596	msi2a	92	96.479	Neolamprologus_brichardi
ENSPLAG00000000436	msi2a	58	100.000	ENSNLEG00000008059	MSI2	70	96.040	Nomascus_leucogenys
ENSPLAG00000000436	msi2a	76	90.845	ENSODEG00000011974	MSI2	55	90.210	Octodon_degus
ENSPLAG00000000436	msi2a	72	100.000	ENSONIG00000001972	msi2a	76	100.000	Oreochromis_niloticus
ENSPLAG00000000436	msi2a	64	92.562	ENSOCUG00000010440	MSI2	52	91.803	Oryctolagus_cuniculus
ENSPLAG00000000436	msi2a	76	96.479	ENSORLG00000009671	msi2a	62	100.000	Oryzias_latipes
ENSPLAG00000000436	msi2a	76	96.479	ENSORLG00020021556	msi2a	62	100.000	Oryzias_latipes_hni
ENSPLAG00000000436	msi2a	76	96.479	ENSORLG00015004592	msi2a	62	100.000	Oryzias_latipes_hsok
ENSPLAG00000000436	msi2a	72	100.000	ENSOMEG00000000146	msi2a	62	100.000	Oryzias_melastigma
ENSPLAG00000000436	msi2a	65	91.057	ENSOGAG00000005621	MSI2	55	91.057	Otolemur_garnettii
ENSPLAG00000000436	msi2a	61	96.522	ENSPPAG00000037697	MSI2	67	96.522	Pan_paniscus
ENSPLAG00000000436	msi2a	61	96.522	ENSPPRG00000001848	MSI2	67	96.522	Panthera_pardus
ENSPLAG00000000436	msi2a	84	60.625	ENSPTIG00000021873	-	77	60.625	Panthera_tigris_altaica
ENSPLAG00000000436	msi2a	61	96.040	ENSPTIG00000021678	MSI2	62	96.040	Panthera_tigris_altaica
ENSPLAG00000000436	msi2a	61	96.522	ENSPTRG00000009437	MSI2	67	96.522	Pan_troglodytes
ENSPLAG00000000436	msi2a	76	90.845	ENSPANG00000022319	MSI2	67	96.522	Papio_anubis
ENSPLAG00000000436	msi2a	76	90.141	ENSPKIG00000007038	-	70	89.510	Paramormyrops_kingsleyae
ENSPLAG00000000436	msi2a	52	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSPLAG00000000436	msi2a	72	88.971	ENSPMGG00000005888	msi2a	56	88.971	Periophthalmus_magnuspinnatus
ENSPLAG00000000436	msi2a	60	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSPLAG00000000436	msi2a	76	92.958	ENSPCIG00000006063	MSI2	54	92.308	Phascolarctos_cinereus
ENSPLAG00000000436	msi2a	56	99.048	ENSPFOG00000019337	MSI2	91	99.048	Poecilia_formosa
ENSPLAG00000000436	msi2a	94	89.773	ENSPMEG00000013247	msi2a	100	89.773	Poecilia_mexicana
ENSPLAG00000000436	msi2a	72	100.000	ENSPREG00000000881	msi2a	55	88.971	Poecilia_reticulata
ENSPLAG00000000436	msi2a	61	96.522	ENSPCOG00000019195	-	78	96.522	Propithecus_coquereli
ENSPLAG00000000436	msi2a	64	91.589	ENSPVAG00000017053	MSI2	53	90.741	Pteropus_vampyrus
ENSPLAG00000000436	msi2a	72	100.000	ENSPNYG00000018393	msi2a	62	100.000	Pundamilia_nyererei
ENSPLAG00000000436	msi2a	76	92.254	ENSPNAG00000014957	msi2a	58	91.608	Pygocentrus_nattereri
ENSPLAG00000000436	msi2a	76	92.958	ENSPNAG00000000844	msi2b	56	81.818	Pygocentrus_nattereri
ENSPLAG00000000436	msi2a	64	90.217	ENSRNOG00000025338	Msi2	50	89.247	Rattus_norvegicus
ENSPLAG00000000436	msi2a	52	73.626	ENSRBIG00000032064	-	82	73.626	Rhinopithecus_bieti
ENSPLAG00000000436	msi2a	61	96.491	ENSRROG00000034421	-	87	96.491	Rhinopithecus_roxellana
ENSPLAG00000000436	msi2a	61	96.522	ENSSBOG00000026425	MSI2	67	96.522	Saimiri_boliviensis_boliviensis
ENSPLAG00000000436	msi2a	64	93.333	ENSSHAG00000008672	MSI2	86	65.714	Sarcophilus_harrisii
ENSPLAG00000000436	msi2a	64	89.256	ENSSFOG00015021687	-	60	88.525	Scleropages_formosus
ENSPLAG00000000436	msi2a	76	96.479	ENSSMAG00000018484	msi2a	62	100.000	Scophthalmus_maximus
ENSPLAG00000000436	msi2a	86	87.654	ENSSDUG00000014507	msi2a	82	100.000	Seriola_dumerili
ENSPLAG00000000436	msi2a	76	90.845	ENSSDUG00000021968	-	94	90.210	Seriola_dumerili
ENSPLAG00000000436	msi2a	76	96.479	ENSSLDG00000017172	msi2a	62	100.000	Seriola_lalandi_dorsalis
ENSPLAG00000000436	msi2a	52	79.121	ENSSLDG00000021332	-	68	79.121	Seriola_lalandi_dorsalis
ENSPLAG00000000436	msi2a	76	92.254	ENSSPUG00000000913	-	94	91.608	Sphenodon_punctatus
ENSPLAG00000000436	msi2a	76	96.479	ENSSPAG00000017793	msi2a	62	100.000	Stegastes_partitus
ENSPLAG00000000436	msi2a	76	90.845	ENSSSCG00000038505	MSI2	62	90.210	Sus_scrofa
ENSPLAG00000000436	msi2a	72	100.000	ENSTRUG00000021248	msi2a	59	87.413	Takifugu_rubripes
ENSPLAG00000000436	msi2a	72	77.778	ENSTBEG00000001241	MSI2	57	77.778	Tupaia_belangeri
ENSPLAG00000000436	msi2a	61	96.522	ENSUAMG00000000700	MSI2	67	96.522	Ursus_americanus
ENSPLAG00000000436	msi2a	64	90.217	ENSUMAG00000000505	MSI2	54	89.247	Ursus_maritimus
ENSPLAG00000000436	msi2a	72	95.960	ENSVVUG00000011783	MSI2	54	92.661	Vulpes_vulpes
ENSPLAG00000000436	msi2a	72	100.000	ENSXMAG00000000608	msi2a	62	100.000	Xiphophorus_maculatus