EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000000516 (Gene tree)
Gene ID: 106961764
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 1170 bases
Position: chrKQ546648.1:113082-114251
Accession: 106961764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000009513	LSM	PF01423.22	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000001086	-	291	XM_015055744	ENSPLAP00000009513	96 (aa)	XP_014911230	-

Gene Model

Click here to download ENSPLAG00000000516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000516	lsm8	89	94.118	ENSG00000128534	LSM8	100	96.000	Homo_sapiens
ENSPLAG00000000516	lsm8	100	89.583	ENSAPOG00000008649	lsm8	100	89.583	Acanthochromis_polyacanthus
ENSPLAG00000000516	lsm8	89	94.118	ENSAMEG00000001162	LSM8	89	94.118	Ailuropoda_melanoleuca
ENSPLAG00000000516	lsm8	78	98.667	ENSACIG00000014694	lsm8	100	98.667	Amphilophus_citrinellus
ENSPLAG00000000516	lsm8	100	89.583	ENSAOCG00000013926	lsm8	100	89.583	Amphiprion_ocellaris
ENSPLAG00000000516	lsm8	100	89.583	ENSAPEG00000023502	lsm8	100	89.583	Amphiprion_percula
ENSPLAG00000000516	lsm8	78	98.667	ENSATEG00000023432	lsm8	100	98.667	Anabas_testudineus
ENSPLAG00000000516	lsm8	90	95.349	ENSAPLG00000005115	LSM8	87	95.349	Anas_platyrhynchos
ENSPLAG00000000516	lsm8	89	94.118	ENSANAG00000027771	LSM8	100	93.243	Aotus_nancymaae
ENSPLAG00000000516	lsm8	100	89.583	ENSACLG00000011253	lsm8	100	89.583	Astatotilapia_calliptera
ENSPLAG00000000516	lsm8	100	87.500	ENSAMXG00000042902	lsm8	100	87.500	Astyanax_mexicanus
ENSPLAG00000000516	lsm8	89	94.118	ENSBTAG00000012649	LSM8	89	94.118	Bos_taurus
ENSPLAG00000000516	lsm8	98	55.319	WBGene00003082	lsm-8	96	55.319	Caenorhabditis_elegans
ENSPLAG00000000516	lsm8	89	94.118	ENSCJAG00000046406	LSM8	100	93.243	Callithrix_jacchus
ENSPLAG00000000516	lsm8	86	95.181	ENSCAFG00000016459	LSM8	84	95.181	Canis_familiaris
ENSPLAG00000000516	lsm8	89	94.118	ENSCAFG00020007643	-	89	94.118	Canis_lupus_dingo
ENSPLAG00000000516	lsm8	89	83.529	ENSCAFG00020012800	-	66	83.529	Canis_lupus_dingo
ENSPLAG00000000516	lsm8	91	94.253	ENSCHIG00000014201	LSM8	93	94.253	Capra_hircus
ENSPLAG00000000516	lsm8	89	94.118	ENSTSYG00000032434	LSM8	89	94.118	Carlito_syrichta
ENSPLAG00000000516	lsm8	77	94.595	ENSCAPG00000008253	LSM8	100	94.595	Cavia_aperea
ENSPLAG00000000516	lsm8	89	94.118	ENSCPOG00000035673	LSM8	89	94.118	Cavia_porcellus
ENSPLAG00000000516	lsm8	89	94.118	ENSCCAG00000021329	LSM8	100	93.243	Cebus_capucinus
ENSPLAG00000000516	lsm8	89	94.118	ENSCATG00000045302	LSM8	100	93.243	Cercocebus_atys
ENSPLAG00000000516	lsm8	89	94.118	ENSCLAG00000003726	LSM8	89	94.118	Chinchilla_lanigera
ENSPLAG00000000516	lsm8	89	94.118	ENSCSAG00000010802	-	89	94.118	Chlorocebus_sabaeus
ENSPLAG00000000516	lsm8	100	84.375	ENSCSAG00000019007	-	100	84.375	Chlorocebus_sabaeus
ENSPLAG00000000516	lsm8	90	94.186	ENSCPBG00000008154	LSM8	88	94.186	Chrysemys_picta_bellii
ENSPLAG00000000516	lsm8	100	69.792	ENSCING00000024877	-	100	69.792	Ciona_intestinalis
ENSPLAG00000000516	lsm8	89	94.118	ENSCANG00000040728	LSM8	100	93.243	Colobus_angolensis_palliatus
ENSPLAG00000000516	lsm8	89	94.118	ENSCGRG00001000450	Lsm8	89	94.118	Cricetulus_griseus_chok1gshd
ENSPLAG00000000516	lsm8	89	94.118	ENSCGRG00000005587	Lsm8	100	94.118	Cricetulus_griseus_crigri
ENSPLAG00000000516	lsm8	75	97.222	ENSCSEG00000004164	lsm8	79	97.222	Cynoglossus_semilaevis
ENSPLAG00000000516	lsm8	100	90.625	ENSCVAG00000020547	lsm8	100	90.625	Cyprinodon_variegatus
ENSPLAG00000000516	lsm8	100	87.500	ENSDARG00000091656	lsm8	100	87.500	Danio_rerio
ENSPLAG00000000516	lsm8	89	94.118	ENSDNOG00000034613	LSM8	89	94.118	Dasypus_novemcinctus
ENSPLAG00000000516	lsm8	89	94.118	ENSDORG00000027868	Lsm8	89	94.118	Dipodomys_ordii
ENSPLAG00000000516	lsm8	96	67.391	FBgn0035271	CG2021	97	67.391	Drosophila_melanogaster
ENSPLAG00000000516	lsm8	100	86.458	ENSETEG00000011594	LSM8	100	86.458	Echinops_telfairi
ENSPLAG00000000516	lsm8	77	91.892	ENSEBUG00000012017	lsm8	100	91.892	Eptatretus_burgeri
ENSPLAG00000000516	lsm8	89	94.118	ENSEASG00005008932	LSM8	55	94.118	Equus_asinus_asinus
ENSPLAG00000000516	lsm8	91	94.253	ENSECAG00000024025	LSM8	79	94.253	Equus_caballus
ENSPLAG00000000516	lsm8	100	85.417	ENSELUG00000010138	lsm8	100	85.417	Esox_lucius
ENSPLAG00000000516	lsm8	89	94.118	ENSFCAG00000036620	-	89	94.118	Felis_catus
ENSPLAG00000000516	lsm8	79	72.368	ENSFCAG00000044794	-	76	72.368	Felis_catus
ENSPLAG00000000516	lsm8	100	86.458	ENSFALG00000010023	LSM8	100	86.458	Ficedula_albicollis
ENSPLAG00000000516	lsm8	89	94.118	ENSFDAG00000019530	LSM8	89	94.118	Fukomys_damarensis
ENSPLAG00000000516	lsm8	100	89.583	ENSFHEG00000013729	lsm8	100	89.583	Fundulus_heteroclitus
ENSPLAG00000000516	lsm8	100	86.458	ENSGALG00000009110	LSM8	100	86.458	Gallus_gallus
ENSPLAG00000000516	lsm8	100	90.625	ENSGAFG00000001135	lsm8	100	90.625	Gambusia_affinis
ENSPLAG00000000516	lsm8	90	94.186	ENSGAGG00000017366	LSM8	89	94.118	Gopherus_agassizii
ENSPLAG00000000516	lsm8	89	94.118	ENSGGOG00000041883	LSM8	89	94.118	Gorilla_gorilla
ENSPLAG00000000516	lsm8	100	89.583	ENSHBUG00000003646	lsm8	100	89.583	Haplochromis_burtoni
ENSPLAG00000000516	lsm8	59	94.737	ENSHGLG00000001988	-	83	94.737	Heterocephalus_glaber_female
ENSPLAG00000000516	lsm8	100	80.208	ENSHGLG00000019782	-	100	80.208	Heterocephalus_glaber_female
ENSPLAG00000000516	lsm8	98	84.043	ENSHGLG00100003934	-	94	84.043	Heterocephalus_glaber_male
ENSPLAG00000000516	lsm8	89	89.412	ENSHGLG00100012166	-	88	89.412	Heterocephalus_glaber_male
ENSPLAG00000000516	lsm8	100	89.583	ENSHCOG00000005037	lsm8	100	89.583	Hippocampus_comes
ENSPLAG00000000516	lsm8	100	87.500	ENSIPUG00000019811	NAA38	100	87.500	Ictalurus_punctatus
ENSPLAG00000000516	lsm8	89	94.118	ENSSTOG00000009039	LSM8	89	94.118	Ictidomys_tridecemlineatus
ENSPLAG00000000516	lsm8	89	82.353	ENSSTOG00000034801	-	79	82.353	Ictidomys_tridecemlineatus
ENSPLAG00000000516	lsm8	100	85.417	ENSJJAG00000009031	Lsm8	99	85.417	Jaculus_jaculus
ENSPLAG00000000516	lsm8	100	89.583	ENSKMAG00000018983	lsm8	100	89.583	Kryptolebias_marmoratus
ENSPLAG00000000516	lsm8	89	96.471	ENSLACG00000010231	LSM8	89	96.471	Latimeria_chalumnae
ENSPLAG00000000516	lsm8	100	88.542	ENSLOCG00000015580	lsm8	100	88.542	Lepisosteus_oculatus
ENSPLAG00000000516	lsm8	89	94.118	ENSLAFG00000011242	LSM8	88	94.118	Loxodonta_africana
ENSPLAG00000000516	lsm8	100	83.333	ENSMFAG00000013044	-	100	83.333	Macaca_fascicularis
ENSPLAG00000000516	lsm8	89	94.118	ENSMFAG00000035798	LSM8	100	93.243	Macaca_fascicularis
ENSPLAG00000000516	lsm8	89	94.118	ENSMMUG00000046401	LSM8	100	93.243	Macaca_mulatta
ENSPLAG00000000516	lsm8	78	93.333	ENSMNEG00000011141	-	100	93.333	Macaca_nemestrina
ENSPLAG00000000516	lsm8	89	94.118	ENSMNEG00000036764	-	100	93.243	Macaca_nemestrina
ENSPLAG00000000516	lsm8	100	72.917	ENSMLEG00000039324	-	100	72.917	Mandrillus_leucophaeus
ENSPLAG00000000516	lsm8	89	94.118	ENSMLEG00000035828	-	100	93.243	Mandrillus_leucophaeus
ENSPLAG00000000516	lsm8	78	98.667	ENSMAMG00000018839	lsm8	100	98.667	Mastacembelus_armatus
ENSPLAG00000000516	lsm8	100	89.583	ENSMZEG00005019138	lsm8	100	89.583	Maylandia_zebra
ENSPLAG00000000516	lsm8	100	86.458	ENSMGAG00000008808	LSM8	100	86.458	Meleagris_gallopavo
ENSPLAG00000000516	lsm8	100	69.792	ENSMAUG00000015356	-	100	69.792	Mesocricetus_auratus
ENSPLAG00000000516	lsm8	89	87.059	ENSMAUG00000015721	-	88	87.059	Mesocricetus_auratus
ENSPLAG00000000516	lsm8	75	88.889	ENSMAUG00000020287	-	100	86.486	Mesocricetus_auratus
ENSPLAG00000000516	lsm8	89	94.118	ENSMICG00000042730	LSM8	89	94.118	Microcebus_murinus
ENSPLAG00000000516	lsm8	89	94.118	ENSMOCG00000001688	Lsm8	89	94.118	Microtus_ochrogaster
ENSPLAG00000000516	lsm8	78	98.667	ENSMMOG00000006046	lsm8	100	98.667	Mola_mola
ENSPLAG00000000516	lsm8	76	84.000	ENSMODG00000015729	LSM8	96	84.000	Monodelphis_domestica
ENSPLAG00000000516	lsm8	100	88.542	ENSMALG00000000405	lsm8	100	88.542	Monopterus_albus
ENSPLAG00000000516	lsm8	89	94.118	MGP_CAROLIEiJ_G0028125	-	89	94.118	Mus_caroli
ENSPLAG00000000516	lsm8	89	94.118	ENSMUSG00000044155	Lsm8	89	94.118	Mus_musculus
ENSPLAG00000000516	lsm8	89	94.118	MGP_PahariEiJ_G0021881	Lsm8	100	96.000	Mus_pahari
ENSPLAG00000000516	lsm8	89	94.118	MGP_SPRETEiJ_G0029125	-	89	94.118	Mus_spretus
ENSPLAG00000000516	lsm8	89	94.118	ENSMLUG00000006837	-	89	94.118	Myotis_lucifugus
ENSPLAG00000000516	lsm8	89	92.941	ENSMLUG00000027762	-	89	92.941	Myotis_lucifugus
ENSPLAG00000000516	lsm8	89	94.118	ENSNGAG00000016554	Lsm8	89	94.118	Nannospalax_galili
ENSPLAG00000000516	lsm8	100	89.583	ENSNBRG00000014441	lsm8	100	89.583	Neolamprologus_brichardi
ENSPLAG00000000516	lsm8	89	94.118	ENSNLEG00000011768	LSM8	89	94.118	Nomascus_leucogenys
ENSPLAG00000000516	lsm8	100	73.958	ENSMEUG00000007801	LSM8	100	73.958	Notamacropus_eugenii
ENSPLAG00000000516	lsm8	89	94.118	ENSOPRG00000014809	LSM8	100	94.118	Ochotona_princeps
ENSPLAG00000000516	lsm8	90	70.930	ENSODEG00000020290	-	100	70.930	Octodon_degus
ENSPLAG00000000516	lsm8	89	94.118	ENSODEG00000000418	-	89	94.118	Octodon_degus
ENSPLAG00000000516	lsm8	89	94.118	ENSOANG00000014536	LSM8	89	94.118	Ornithorhynchus_anatinus
ENSPLAG00000000516	lsm8	89	94.118	ENSOCUG00000017359	LSM8	88	94.118	Oryctolagus_cuniculus
ENSPLAG00000000516	lsm8	75	98.611	ENSORLG00000017432	lsm8	77	98.611	Oryzias_latipes
ENSPLAG00000000516	lsm8	75	98.611	ENSORLG00020004376	lsm8	77	98.611	Oryzias_latipes_hni
ENSPLAG00000000516	lsm8	100	89.583	ENSORLG00015003757	lsm8	100	89.583	Oryzias_latipes_hsok
ENSPLAG00000000516	lsm8	72	98.551	ENSOMEG00000022509	lsm8	83	94.667	Oryzias_melastigma
ENSPLAG00000000516	lsm8	89	94.118	ENSOGAG00000013377	LSM8	89	94.118	Otolemur_garnettii
ENSPLAG00000000516	lsm8	89	94.118	ENSOARG00000017974	LSM8	89	94.118	Ovis_aries
ENSPLAG00000000516	lsm8	78	96.000	ENSPPAG00000043228	-	100	96.000	Pan_paniscus
ENSPLAG00000000516	lsm8	89	94.118	ENSPPRG00000006444	LSM8	89	94.118	Panthera_pardus
ENSPLAG00000000516	lsm8	89	94.118	ENSPTIG00000004722	LSM8	89	94.118	Panthera_tigris_altaica
ENSPLAG00000000516	lsm8	78	96.000	ENSPTRG00000046596	-	100	96.000	Pan_troglodytes
ENSPLAG00000000516	lsm8	100	82.292	ENSPANG00000019395	-	100	82.292	Papio_anubis
ENSPLAG00000000516	lsm8	89	94.118	ENSPANG00000035470	-	100	93.243	Papio_anubis
ENSPLAG00000000516	lsm8	91	95.402	ENSPKIG00000006092	lsm8	88	95.402	Paramormyrops_kingsleyae
ENSPLAG00000000516	lsm8	78	96.000	ENSPSIG00000017054	LSM8	100	96.000	Pelodiscus_sinensis
ENSPLAG00000000516	lsm8	78	98.667	ENSPMGG00000016442	lsm8	100	98.667	Periophthalmus_magnuspinnatus
ENSPLAG00000000516	lsm8	77	93.243	ENSPEMG00000009153	Lsm8	100	93.243	Peromyscus_maniculatus_bairdii
ENSPLAG00000000516	lsm8	97	86.022	ENSPCIG00000021467	LSM8	98	86.022	Phascolarctos_cinereus
ENSPLAG00000000516	lsm8	100	90.625	ENSPFOG00000012340	lsm8	100	90.625	Poecilia_formosa
ENSPLAG00000000516	lsm8	100	90.625	ENSPMEG00000022567	lsm8	100	90.625	Poecilia_mexicana
ENSPLAG00000000516	lsm8	76	88.750	ENSPREG00000005527	lsm8	72	88.750	Poecilia_reticulata
ENSPLAG00000000516	lsm8	89	94.118	ENSPPYG00000017942	LSM8	89	94.118	Pongo_abelii
ENSPLAG00000000516	lsm8	89	94.118	ENSPCOG00000003309	-	89	94.118	Propithecus_coquereli
ENSPLAG00000000516	lsm8	85	73.171	ENSPCOG00000017982	-	84	73.171	Propithecus_coquereli
ENSPLAG00000000516	lsm8	89	92.941	ENSPVAG00000000990	LSM8	100	92.941	Pteropus_vampyrus
ENSPLAG00000000516	lsm8	100	89.583	ENSPNYG00000011448	lsm8	100	89.583	Pundamilia_nyererei
ENSPLAG00000000516	lsm8	100	87.500	ENSPNAG00000010252	lsm8	100	87.500	Pygocentrus_nattereri
ENSPLAG00000000516	lsm8	89	94.118	ENSRNOG00000058677	Lsm8	89	94.118	Rattus_norvegicus
ENSPLAG00000000516	lsm8	89	94.118	ENSRBIG00000032851	LSM8	100	93.243	Rhinopithecus_bieti
ENSPLAG00000000516	lsm8	89	94.118	ENSRROG00000039618	LSM8	100	93.243	Rhinopithecus_roxellana
ENSPLAG00000000516	lsm8	89	94.118	ENSSBOG00000023223	LSM8	100	93.243	Saimiri_boliviensis_boliviensis
ENSPLAG00000000516	lsm8	89	94.118	ENSSHAG00000018435	-	89	94.118	Sarcophilus_harrisii
ENSPLAG00000000516	lsm8	100	88.542	ENSSFOG00015004412	lsm8	100	88.542	Scleropages_formosus
ENSPLAG00000000516	lsm8	78	96.000	ENSSMAG00000009458	lsm8	100	96.000	Scophthalmus_maximus
ENSPLAG00000000516	lsm8	100	89.583	ENSSDUG00000014702	lsm8	100	89.583	Seriola_dumerili
ENSPLAG00000000516	lsm8	78	98.667	ENSSLDG00000016870	lsm8	100	98.667	Seriola_lalandi_dorsalis
ENSPLAG00000000516	lsm8	75	95.833	ENSSARG00000009628	-	100	95.833	Sorex_araneus
ENSPLAG00000000516	lsm8	89	94.118	ENSSPUG00000017419	LSM8	89	94.118	Sphenodon_punctatus
ENSPLAG00000000516	lsm8	100	89.583	ENSSPAG00000021422	lsm8	100	89.583	Stegastes_partitus
ENSPLAG00000000516	lsm8	89	94.118	ENSSSCG00000021652	LSM8	89	94.118	Sus_scrofa
ENSPLAG00000000516	lsm8	100	85.417	ENSTGUG00000016823	-	100	85.417	Taeniopygia_guttata
ENSPLAG00000000516	lsm8	100	86.458	ENSTGUG00000004730	-	100	86.458	Taeniopygia_guttata
ENSPLAG00000000516	lsm8	100	89.583	ENSTRUG00000025192	lsm8	100	89.583	Takifugu_rubripes
ENSPLAG00000000516	lsm8	100	89.583	ENSTNIG00000002864	lsm8	100	89.583	Tetraodon_nigroviridis
ENSPLAG00000000516	lsm8	89	94.118	ENSTTRG00000001023	LSM8	89	94.118	Tursiops_truncatus
ENSPLAG00000000516	lsm8	91	94.253	ENSUAMG00000006943	-	91	94.253	Ursus_americanus
ENSPLAG00000000516	lsm8	91	94.253	ENSUMAG00000003073	LSM8	93	94.253	Ursus_maritimus
ENSPLAG00000000516	lsm8	89	94.118	ENSVPAG00000001530	LSM8	89	94.118	Vicugna_pacos
ENSPLAG00000000516	lsm8	78	93.333	ENSVVUG00000013248	-	82	93.333	Vulpes_vulpes
ENSPLAG00000000516	lsm8	89	94.118	ENSXETG00000021829	lsm8	88	94.118	Xenopus_tropicalis
ENSPLAG00000000516	lsm8	89	98.824	ENSXCOG00000012938	lsm8	89	98.824	Xiphophorus_couchianus
ENSPLAG00000000516	lsm8	100	90.625	ENSXMAG00000025919	lsm8	100	90.625	Xiphophorus_maculatus