EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000000562 (Gene tree)
Gene ID: 106961269
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6498 bases
Position: chrKQ546598.1:40930-47427
Accession: 106961269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019633	SAP	PF02037.27	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015510	-	2417	XM_015054870	ENSPLAP00000019633	610 (aa)	XP_014910356	UPI00072DF652

Gene Model

Click here to download ENSPLAG00000000562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000562	xrcc6	99	55.065	ENSG00000196419	XRCC6	99	55.229	Homo_sapiens
ENSPLAG00000000562	xrcc6	99	84.729	ENSAPOG00000012704	xrcc6	100	84.729	Acanthochromis_polyacanthus
ENSPLAG00000000562	xrcc6	100	84.590	ENSACIG00000021277	xrcc6	100	84.590	Amphilophus_citrinellus
ENSPLAG00000000562	xrcc6	100	84.918	ENSAOCG00000021344	xrcc6	100	84.918	Amphiprion_ocellaris
ENSPLAG00000000562	xrcc6	100	85.082	ENSAPEG00000020712	xrcc6	100	85.082	Amphiprion_percula
ENSPLAG00000000562	xrcc6	100	84.754	ENSATEG00000007119	xrcc6	100	84.754	Anabas_testudineus
ENSPLAG00000000562	xrcc6	90	60.401	ENSAPLG00000004469	XRCC6	98	60.512	Anas_platyrhynchos
ENSPLAG00000000562	xrcc6	99	46.330	ENSANAG00000023445	-	99	46.166	Aotus_nancymaae
ENSPLAG00000000562	xrcc6	99	48.039	ENSANAG00000035230	-	99	47.876	Aotus_nancymaae
ENSPLAG00000000562	xrcc6	99	54.739	ENSANAG00000018684	XRCC6	98	55.839	Aotus_nancymaae
ENSPLAG00000000562	xrcc6	99	48.440	ENSANAG00000020017	-	99	48.440	Aotus_nancymaae
ENSPLAG00000000562	xrcc6	100	85.410	ENSACLG00000018608	xrcc6	100	85.410	Astatotilapia_calliptera
ENSPLAG00000000562	xrcc6	99	76.645	ENSAMXG00000007545	xrcc6	99	76.645	Astyanax_mexicanus
ENSPLAG00000000562	xrcc6	99	54.739	ENSCJAG00000045512	XRCC6	99	54.739	Callithrix_jacchus
ENSPLAG00000000562	xrcc6	99	55.392	ENSTSYG00000011348	XRCC6	99	55.392	Carlito_syrichta
ENSPLAG00000000562	xrcc6	93	53.175	ENSCCAG00000030468	-	99	53.175	Cebus_capucinus
ENSPLAG00000000562	xrcc6	99	44.646	ENSCCAG00000035711	-	99	44.481	Cebus_capucinus
ENSPLAG00000000562	xrcc6	99	46.305	ENSCCAG00000037663	-	97	46.305	Cebus_capucinus
ENSPLAG00000000562	xrcc6	99	51.797	ENSCCAG00000030041	-	95	51.307	Cebus_capucinus
ENSPLAG00000000562	xrcc6	99	55.229	ENSCATG00000042366	XRCC6	99	55.392	Cercocebus_atys
ENSPLAG00000000562	xrcc6	99	55.810	ENSCLAG00000016669	XRCC6	99	55.810	Chinchilla_lanigera
ENSPLAG00000000562	xrcc6	99	55.229	ENSCSAG00000005784	XRCC6	99	55.392	Chlorocebus_sabaeus
ENSPLAG00000000562	xrcc6	99	59.606	ENSCPBG00000020535	XRCC6	99	59.606	Chrysemys_picta_bellii
ENSPLAG00000000562	xrcc6	99	33.990	ENSCING00000000633	-	95	34.483	Ciona_intestinalis
ENSPLAG00000000562	xrcc6	99	55.229	ENSCANG00000031032	XRCC6	99	55.392	Colobus_angolensis_palliatus
ENSPLAG00000000562	xrcc6	99	52.138	ENSCGRG00001019029	Xrcc6	99	52.138	Cricetulus_griseus_chok1gshd
ENSPLAG00000000562	xrcc6	99	56.628	ENSCGRG00000001528	Xrcc6	99	56.908	Cricetulus_griseus_crigri
ENSPLAG00000000562	xrcc6	100	79.344	ENSCSEG00000020434	xrcc6	100	79.344	Cynoglossus_semilaevis
ENSPLAG00000000562	xrcc6	100	89.836	ENSCVAG00000002189	xrcc6	100	89.836	Cyprinodon_variegatus
ENSPLAG00000000562	xrcc6	99	73.727	ENSDARG00000071551	xrcc6	99	74.384	Danio_rerio
ENSPLAG00000000562	xrcc6	78	53.285	ENSETEG00000015333	-	77	53.285	Echinops_telfairi
ENSPLAG00000000562	xrcc6	99	54.501	ENSEASG00005001514	XRCC6	99	55.155	Equus_asinus_asinus
ENSPLAG00000000562	xrcc6	99	54.664	ENSECAG00000017563	XRCC6	99	55.044	Equus_caballus
ENSPLAG00000000562	xrcc6	100	74.098	ENSELUG00000020301	xrcc6	100	74.098	Esox_lucius
ENSPLAG00000000562	xrcc6	99	58.401	ENSFALG00000011908	XRCC6	96	58.564	Ficedula_albicollis
ENSPLAG00000000562	xrcc6	100	91.967	ENSFHEG00000016833	xrcc6	100	91.967	Fundulus_heteroclitus
ENSPLAG00000000562	xrcc6	99	66.938	ENSGMOG00000013524	xrcc6	100	66.938	Gadus_morhua
ENSPLAG00000000562	xrcc6	99	59.121	ENSGALG00000011932	XRCC6	94	60.616	Gallus_gallus
ENSPLAG00000000562	xrcc6	100	93.934	ENSGAFG00000008130	xrcc6	100	93.934	Gambusia_affinis
ENSPLAG00000000562	xrcc6	99	81.759	ENSGACG00000004868	xrcc6	99	81.759	Gasterosteus_aculeatus
ENSPLAG00000000562	xrcc6	99	59.442	ENSGAGG00000017518	XRCC6	99	59.442	Gopherus_agassizii
ENSPLAG00000000562	xrcc6	99	55.065	ENSGGOG00000015885	XRCC6	96	58.333	Gorilla_gorilla
ENSPLAG00000000562	xrcc6	93	85.689	ENSHBUG00000023281	xrcc6	100	85.689	Haplochromis_burtoni
ENSPLAG00000000562	xrcc6	99	55.738	ENSHGLG00000018078	XRCC6	99	55.410	Heterocephalus_glaber_female
ENSPLAG00000000562	xrcc6	99	55.738	ENSHGLG00100011264	XRCC6	99	55.410	Heterocephalus_glaber_male
ENSPLAG00000000562	xrcc6	100	77.541	ENSHCOG00000009821	xrcc6	100	77.541	Hippocampus_comes
ENSPLAG00000000562	xrcc6	99	75.493	ENSIPUG00000000767	xrcc6	99	74.507	Ictalurus_punctatus
ENSPLAG00000000562	xrcc6	99	55.319	ENSSTOG00000009490	XRCC6	99	55.646	Ictidomys_tridecemlineatus
ENSPLAG00000000562	xrcc6	99	52.059	ENSJJAG00000017136	Xrcc6	99	53.048	Jaculus_jaculus
ENSPLAG00000000562	xrcc6	99	88.013	ENSKMAG00000002141	xrcc6	99	88.013	Kryptolebias_marmoratus
ENSPLAG00000000562	xrcc6	99	84.046	ENSLBEG00000002691	xrcc6	99	84.046	Labrus_bergylta
ENSPLAG00000000562	xrcc6	87	63.366	ENSLOCG00000011533	xrcc6	99	63.366	Lepisosteus_oculatus
ENSPLAG00000000562	xrcc6	99	55.229	ENSMFAG00000003352	XRCC6	99	55.392	Macaca_fascicularis
ENSPLAG00000000562	xrcc6	99	55.229	ENSMMUG00000001856	XRCC6	99	55.392	Macaca_mulatta
ENSPLAG00000000562	xrcc6	99	55.229	ENSMNEG00000035076	XRCC6	99	55.392	Macaca_nemestrina
ENSPLAG00000000562	xrcc6	99	55.229	ENSMLEG00000019869	XRCC6	99	55.392	Mandrillus_leucophaeus
ENSPLAG00000000562	xrcc6	100	83.142	ENSMAMG00000003368	xrcc6	100	83.142	Mastacembelus_armatus
ENSPLAG00000000562	xrcc6	96	82.624	ENSMAMG00000003405	xrcc6	97	82.624	Mastacembelus_armatus
ENSPLAG00000000562	xrcc6	100	85.246	ENSMZEG00005028080	xrcc6	100	85.246	Maylandia_zebra
ENSPLAG00000000562	xrcc6	99	58.143	ENSMGAG00000012146	XRCC6	94	59.418	Meleagris_gallopavo
ENSPLAG00000000562	xrcc6	99	57.237	ENSMAUG00000017340	Xrcc6	99	57.237	Mesocricetus_auratus
ENSPLAG00000000562	xrcc6	99	56.178	ENSMOCG00000015717	Xrcc6	99	56.343	Microtus_ochrogaster
ENSPLAG00000000562	xrcc6	100	80.328	ENSMMOG00000003536	xrcc6	99	80.328	Mola_mola
ENSPLAG00000000562	xrcc6	100	83.934	ENSMALG00000013912	xrcc6	95	83.934	Monopterus_albus
ENSPLAG00000000562	xrcc6	99	52.951	MGP_CAROLIEiJ_G0020067	Xrcc6	99	52.951	Mus_caroli
ENSPLAG00000000562	xrcc6	99	57.213	ENSMUSG00000022471	Xrcc6	99	59.316	Mus_musculus
ENSPLAG00000000562	xrcc6	99	57.049	MGP_PahariEiJ_G0020069	Xrcc6	99	57.049	Mus_pahari
ENSPLAG00000000562	xrcc6	96	57.877	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.877	Mus_spretus
ENSPLAG00000000562	xrcc6	99	56.507	ENSNGAG00000013750	Xrcc6	99	56.507	Nannospalax_galili
ENSPLAG00000000562	xrcc6	100	85.410	ENSNBRG00000004125	xrcc6	100	85.410	Neolamprologus_brichardi
ENSPLAG00000000562	xrcc6	95	58.003	ENSOPRG00000002386	XRCC6	99	58.003	Ochotona_princeps
ENSPLAG00000000562	xrcc6	99	55.974	ENSODEG00000015847	XRCC6	99	55.646	Octodon_degus
ENSPLAG00000000562	xrcc6	100	84.918	ENSONIG00000019715	xrcc6	100	84.918	Oreochromis_niloticus
ENSPLAG00000000562	xrcc6	68	59.856	ENSOANG00000011328	XRCC6	99	59.856	Ornithorhynchus_anatinus
ENSPLAG00000000562	xrcc6	99	56.414	ENSOCUG00000006948	XRCC6	99	56.743	Oryctolagus_cuniculus
ENSPLAG00000000562	xrcc6	100	83.797	ENSORLG00020007820	xrcc6	100	83.797	Oryzias_latipes_hni
ENSPLAG00000000562	xrcc6	100	83.470	ENSORLG00015006406	xrcc6	100	83.470	Oryzias_latipes_hsok
ENSPLAG00000000562	xrcc6	100	83.142	ENSOMEG00000008998	xrcc6	100	83.142	Oryzias_melastigma
ENSPLAG00000000562	xrcc6	99	55.155	ENSOGAG00000008821	XRCC6	99	55.319	Otolemur_garnettii
ENSPLAG00000000562	xrcc6	92	55.676	ENSPPAG00000037167	XRCC6	99	55.676	Pan_paniscus
ENSPLAG00000000562	xrcc6	99	55.065	ENSPTRG00000022548	XRCC6	99	56.239	Pan_troglodytes
ENSPLAG00000000562	xrcc6	99	55.065	ENSPTRG00000045824	XRCC6	99	56.239	Pan_troglodytes
ENSPLAG00000000562	xrcc6	99	55.392	ENSPANG00000001252	XRCC6	99	58.190	Papio_anubis
ENSPLAG00000000562	xrcc6	99	70.888	ENSPKIG00000003974	xrcc6	99	70.888	Paramormyrops_kingsleyae
ENSPLAG00000000562	xrcc6	99	79.236	ENSPMGG00000014220	xrcc6	100	79.236	Periophthalmus_magnuspinnatus
ENSPLAG00000000562	xrcc6	99	55.848	ENSPEMG00000023446	Xrcc6	99	55.848	Peromyscus_maniculatus_bairdii
ENSPLAG00000000562	xrcc6	99	56.628	ENSPCIG00000026409	XRCC6	99	56.628	Phascolarctos_cinereus
ENSPLAG00000000562	xrcc6	100	99.344	ENSPFOG00000017173	xrcc6	100	99.344	Poecilia_formosa
ENSPLAG00000000562	xrcc6	100	98.689	ENSPMEG00000018478	xrcc6	100	98.689	Poecilia_mexicana
ENSPLAG00000000562	xrcc6	100	96.405	ENSPREG00000020957	xrcc6	93	96.405	Poecilia_reticulata
ENSPLAG00000000562	xrcc6	99	48.693	ENSPPYG00000011876	XRCC6	99	48.856	Pongo_abelii
ENSPLAG00000000562	xrcc6	99	55.246	ENSPVAG00000001168	XRCC6	99	55.246	Pteropus_vampyrus
ENSPLAG00000000562	xrcc6	100	85.082	ENSPNYG00000003815	xrcc6	100	80.967	Pundamilia_nyererei
ENSPLAG00000000562	xrcc6	99	56.557	ENSRNOG00000006392	Xrcc6	99	56.721	Rattus_norvegicus
ENSPLAG00000000562	xrcc6	99	50.980	ENSRBIG00000039794	XRCC6	99	52.811	Rhinopithecus_bieti
ENSPLAG00000000562	xrcc6	99	55.229	ENSRROG00000030297	XRCC6	99	55.392	Rhinopithecus_roxellana
ENSPLAG00000000562	xrcc6	67	50.367	ENSSBOG00000024724	-	99	50.367	Saimiri_boliviensis_boliviensis
ENSPLAG00000000562	xrcc6	99	56.536	ENSSHAG00000010790	XRCC6	99	56.536	Sarcophilus_harrisii
ENSPLAG00000000562	xrcc6	99	73.520	ENSSFOG00015014409	xrcc6	99	73.520	Scleropages_formosus
ENSPLAG00000000562	xrcc6	100	85.574	ENSSMAG00000006496	xrcc6	100	85.574	Scophthalmus_maximus
ENSPLAG00000000562	xrcc6	100	85.574	ENSSDUG00000007542	xrcc6	100	85.574	Seriola_dumerili
ENSPLAG00000000562	xrcc6	100	85.246	ENSSLDG00000009974	xrcc6	100	85.246	Seriola_lalandi_dorsalis
ENSPLAG00000000562	xrcc6	99	58.170	ENSSPUG00000012086	XRCC6	99	58.333	Sphenodon_punctatus
ENSPLAG00000000562	xrcc6	100	85.574	ENSSPAG00000015199	xrcc6	100	85.574	Stegastes_partitus
ENSPLAG00000000562	xrcc6	95	60.274	ENSTGUG00000009852	-	95	60.274	Taeniopygia_guttata
ENSPLAG00000000562	xrcc6	99	76.847	ENSTRUG00000017070	xrcc6	99	77.504	Takifugu_rubripes
ENSPLAG00000000562	xrcc6	96	77.157	ENSTNIG00000012947	xrcc6	99	77.157	Tetraodon_nigroviridis
ENSPLAG00000000562	xrcc6	96	52.397	ENSTBEG00000011736	XRCC6	99	52.397	Tupaia_belangeri
ENSPLAG00000000562	xrcc6	99	46.318	ENSTTRG00000006749	XRCC6	99	47.136	Tursiops_truncatus
ENSPLAG00000000562	xrcc6	100	95.902	ENSXMAG00000009691	xrcc6	100	95.902	Xiphophorus_maculatus