EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000597 (Gene tree)
Gene ID: 106964795
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 13070 bases
Position: chrKQ547031.1:10336-23405
Accession: 106964795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002435	RRM_1	PF00076.22	8.5e-41	1	4
ENSPLAP00000002435	RRM_1	PF00076.22	8.5e-41	2	4
ENSPLAP00000002435	RRM_1	PF00076.22	8.5e-41	3	4
ENSPLAP00000002435	RRM_1	PF00076.22	8.5e-41	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013050	-	2688	XM_015060504	ENSPLAP00000002435	495 (aa)	XP_014915990	UPI00072DACAD

Gene Model

Click here to download ENSPLAG00000000597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000597	-	78	42.119	ENSPLAG00000024026	ncl	50	42.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000597	-	80	48.944	ENSACIG00000021941	-	86	48.944	Amphilophus_citrinellus
ENSPLAG00000000597	-	82	45.122	ENSACLG00000009613	-	95	45.122	Astatotilapia_calliptera
ENSPLAG00000000597	-	81	48.905	ENSCSEG00000017388	-	76	48.905	Cynoglossus_semilaevis
ENSPLAG00000000597	-	100	62.828	ENSFHEG00000017265	-	96	62.828	Fundulus_heteroclitus
ENSPLAG00000000597	-	78	39.846	ENSGMOG00000017831	-	97	40.409	Gadus_morhua
ENSPLAG00000000597	-	100	89.495	ENSGAFG00000018408	-	100	89.495	Gambusia_affinis
ENSPLAG00000000597	-	79	45.153	ENSHBUG00000006683	-	93	45.153	Haplochromis_burtoni
ENSPLAG00000000597	-	79	49.620	ENSHCOG00000020361	-	92	49.620	Hippocampus_comes
ENSPLAG00000000597	-	88	58.864	ENSKMAG00000003154	-	92	58.864	Kryptolebias_marmoratus
ENSPLAG00000000597	-	79	45.408	ENSMZEG00005005300	-	93	45.408	Maylandia_zebra
ENSPLAG00000000597	-	79	50.129	ENSMMOG00000018095	-	89	50.129	Mola_mola
ENSPLAG00000000597	-	95	49.725	ENSMALG00000006207	-	94	49.725	Monopterus_albus
ENSPLAG00000000597	-	82	46.683	ENSPMGG00000013705	-	94	47.549	Periophthalmus_magnuspinnatus
ENSPLAG00000000597	-	100	98.182	ENSPFOG00000016767	-	100	98.182	Poecilia_formosa
ENSPLAG00000000597	-	100	96.768	ENSPMEG00000004046	-	100	96.768	Poecilia_mexicana
ENSPLAG00000000597	-	99	90.835	ENSPREG00000007170	-	95	90.835	Poecilia_reticulata
ENSPLAG00000000597	-	79	46.939	ENSPNYG00000000391	-	93	46.939	Pundamilia_nyererei
ENSPLAG00000000597	-	88	48.307	ENSTRUG00000023880	-	88	48.741	Takifugu_rubripes
ENSPLAG00000000597	-	100	89.697	ENSXMAG00000004403	-	100	89.697	Xiphophorus_maculatus