EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000946 (Gene tree)
Gene ID: 106953935
Gene Symbol: zgc:162730
Alias: -
Full Name: tristetraprolin-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2648 bases
Position: chrKQ545929.1:239229-241876
Accession: 106953935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000164	zf-CCCH	PF00642.24	3.8e-19	1	2
ENSPLAP00000000164	zf-CCCH	PF00642.24	3.8e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016881	-	2441	XM_015043075	ENSPLAP00000000164	416 (aa)	XP_014898561	UPI00072E5166

Gene Model

Click here to download ENSPLAG00000000946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000946	zgc:162730	50	40.088	ENSPLAG00000000947	zgc:114130	59	39.925
ENSPLAG00000000946	zgc:162730	84	37.903	ENSPLAG00000020158	sb:cb81	83	37.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000946	zgc:162730	100	78.404	ENSAPOG00000014920	zgc:162730	100	78.169	Acanthochromis_polyacanthus
ENSPLAG00000000946	zgc:162730	84	37.293	ENSAPOG00000011209	sb:cb81	57	45.064	Acanthochromis_polyacanthus
ENSPLAG00000000946	zgc:162730	61	41.091	ENSACIG00000009027	sb:cb81	51	45.339	Amphilophus_citrinellus
ENSPLAG00000000946	zgc:162730	58	68.033	ENSACIG00000017366	zgc:162730	97	68.033	Amphilophus_citrinellus
ENSPLAG00000000946	zgc:162730	100	76.995	ENSAOCG00000002001	zgc:162730	100	78.169	Amphiprion_ocellaris
ENSPLAG00000000946	zgc:162730	85	35.389	ENSAOCG00000024158	sb:cb81	54	46.053	Amphiprion_ocellaris
ENSPLAG00000000946	zgc:162730	85	35.294	ENSAPEG00000022405	sb:cb81	54	46.491	Amphiprion_percula
ENSPLAG00000000946	zgc:162730	94	77.945	ENSAPEG00000015490	zgc:162730	98	78.947	Amphiprion_percula
ENSPLAG00000000946	zgc:162730	100	69.860	ENSATEG00000008790	zgc:162730	100	71.262	Anabas_testudineus
ENSPLAG00000000946	zgc:162730	90	36.275	ENSATEG00000003462	sb:cb81	79	37.534	Anabas_testudineus
ENSPLAG00000000946	zgc:162730	100	71.395	ENSACLG00000022112	zgc:162730	100	71.158	Astatotilapia_calliptera
ENSPLAG00000000946	zgc:162730	61	40.146	ENSACLG00000013759	sb:cb81	78	37.293	Astatotilapia_calliptera
ENSPLAG00000000946	zgc:162730	100	45.215	ENSAMXG00000035945	zgc:162730	99	43.541	Astyanax_mexicanus
ENSPLAG00000000946	zgc:162730	70	41.883	ENSAMXG00000034874	sb:cb81	79	40.401	Astyanax_mexicanus
ENSPLAG00000000946	zgc:162730	88	37.037	ENSCSEG00000014426	sb:cb81	67	36.164	Cynoglossus_semilaevis
ENSPLAG00000000946	zgc:162730	98	68.735	ENSCSEG00000018283	zgc:162730	100	63.571	Cynoglossus_semilaevis
ENSPLAG00000000946	zgc:162730	88	35.459	ENSCVAG00000009207	sb:cb81	79	38.483	Cyprinodon_variegatus
ENSPLAG00000000946	zgc:162730	60	38.321	ENSCVAG00000018574	zgc:114130	59	38.129	Cyprinodon_variegatus
ENSPLAG00000000946	zgc:162730	100	84.689	ENSCVAG00000018571	zgc:162730	100	84.211	Cyprinodon_variegatus
ENSPLAG00000000946	zgc:162730	70	38.141	ENSDARG00000040725	zgc:114130	67	34.967	Danio_rerio
ENSPLAG00000000946	zgc:162730	83	37.396	ENSDARG00000040503	sb:cb81	55	48.261	Danio_rerio
ENSPLAG00000000946	zgc:162730	100	45.261	ENSDARG00000103720	zgc:162730	85	48.529	Danio_rerio
ENSPLAG00000000946	zgc:162730	99	33.787	ENSELUG00000013045	sb:cb81	51	46.629	Esox_lucius
ENSPLAG00000000946	zgc:162730	100	52.719	ENSELUG00000013158	zgc:162730	100	51.773	Esox_lucius
ENSPLAG00000000946	zgc:162730	100	87.321	ENSFHEG00000013710	zgc:162730	100	87.321	Fundulus_heteroclitus
ENSPLAG00000000946	zgc:162730	99	35.056	ENSFHEG00000022187	sb:cb81	79	37.978	Fundulus_heteroclitus
ENSPLAG00000000946	zgc:162730	79	64.985	ENSGMOG00000017242	zgc:162730	99	64.392	Gadus_morhua
ENSPLAG00000000946	zgc:162730	100	94.471	ENSGAFG00000009953	zgc:162730	100	94.471	Gambusia_affinis
ENSPLAG00000000946	zgc:162730	51	46.262	ENSGAFG00000015700	sb:cb81	77	39.193	Gambusia_affinis
ENSPLAG00000000946	zgc:162730	79	69.822	ENSGACG00000008351	zgc:162730	99	71.302	Gasterosteus_aculeatus
ENSPLAG00000000946	zgc:162730	83	38.338	ENSGACG00000013400	sb:cb81	97	36.872	Gasterosteus_aculeatus
ENSPLAG00000000946	zgc:162730	61	38.989	ENSHBUG00000002383	sb:cb81	79	36.986	Haplochromis_burtoni
ENSPLAG00000000946	zgc:162730	100	71.158	ENSHBUG00000015057	zgc:162730	100	70.922	Haplochromis_burtoni
ENSPLAG00000000946	zgc:162730	100	69.838	ENSHCOG00000015801	zgc:162730	100	70.534	Hippocampus_comes
ENSPLAG00000000946	zgc:162730	100	45.476	ENSIPUG00000018248	zgc:162730	100	43.571	Ictalurus_punctatus
ENSPLAG00000000946	zgc:162730	100	77.069	ENSKMAG00000019277	zgc:162730	100	76.832	Kryptolebias_marmoratus
ENSPLAG00000000946	zgc:162730	84	38.320	ENSKMAG00000009884	sb:cb81	78	37.255	Kryptolebias_marmoratus
ENSPLAG00000000946	zgc:162730	100	70.070	ENSLBEG00000018380	zgc:162730	100	70.766	Labrus_bergylta
ENSPLAG00000000946	zgc:162730	100	39.220	ENSLACG00000015980	-	100	38.761	Latimeria_chalumnae
ENSPLAG00000000946	zgc:162730	99	39.059	ENSLACG00000015732	sb:cb81	69	41.356	Latimeria_chalumnae
ENSPLAG00000000946	zgc:162730	99	38.018	ENSLOCG00000014587	sb:cb81	97	39.773	Lepisosteus_oculatus
ENSPLAG00000000946	zgc:162730	100	47.685	ENSLOCG00000014597	zgc:162730	100	46.136	Lepisosteus_oculatus
ENSPLAG00000000946	zgc:162730	72	36.025	ENSMAMG00000007511	zgc:114130	70	37.061	Mastacembelus_armatus
ENSPLAG00000000946	zgc:162730	100	73.193	ENSMAMG00000007516	zgc:162730	99	74.592	Mastacembelus_armatus
ENSPLAG00000000946	zgc:162730	65	41.259	ENSMAMG00000020144	sb:cb81	70	38.187	Mastacembelus_armatus
ENSPLAG00000000946	zgc:162730	54	41.423	ENSMZEG00005024684	sb:cb81	78	37.293	Maylandia_zebra
ENSPLAG00000000946	zgc:162730	100	66.348	ENSMZEG00005014415	zgc:162730	97	69.672	Maylandia_zebra
ENSPLAG00000000946	zgc:162730	90	36.765	ENSMZEG00005016001	-	78	37.293	Maylandia_zebra
ENSPLAG00000000946	zgc:162730	59	71.200	ENSMMOG00000011506	zgc:162730	99	72.400	Mola_mola
ENSPLAG00000000946	zgc:162730	65	40.143	ENSMMOG00000010073	sb:cb81	66	41.727	Mola_mola
ENSPLAG00000000946	zgc:162730	100	69.767	ENSMALG00000002348	zgc:162730	100	70.465	Monopterus_albus
ENSPLAG00000000946	zgc:162730	84	37.600	ENSNBRG00000006231	sb:cb81	77	38.177	Neolamprologus_brichardi
ENSPLAG00000000946	zgc:162730	100	71.395	ENSNBRG00000013701	zgc:162730	100	71.158	Neolamprologus_brichardi
ENSPLAG00000000946	zgc:162730	82	66.474	ENSONIG00000005003	zgc:162730	98	69.298	Oreochromis_niloticus
ENSPLAG00000000946	zgc:162730	99	60.047	ENSORLG00000027149	zgc:162730	100	60.757	Oryzias_latipes
ENSPLAG00000000946	zgc:162730	99	60.520	ENSORLG00020020289	zgc:162730	100	61.229	Oryzias_latipes_hni
ENSPLAG00000000946	zgc:162730	99	61.085	ENSORLG00015001519	zgc:162730	100	61.557	Oryzias_latipes_hsok
ENSPLAG00000000946	zgc:162730	99	64.455	ENSOMEG00000017752	zgc:162730	100	64.929	Oryzias_melastigma
ENSPLAG00000000946	zgc:162730	58	42.231	ENSOMEG00000020565	sb:cb81	78	38.571	Oryzias_melastigma
ENSPLAG00000000946	zgc:162730	100	98.798	ENSPFOG00000003665	zgc:162730	100	98.798	Poecilia_formosa
ENSPLAG00000000946	zgc:162730	84	38.172	ENSPFOG00000013806	sb:cb81	76	37.960	Poecilia_formosa
ENSPLAG00000000946	zgc:162730	84	38.172	ENSPMEG00000022425	sb:cb81	76	37.960	Poecilia_mexicana
ENSPLAG00000000946	zgc:162730	100	98.077	ENSPMEG00000000341	zgc:162730	100	98.077	Poecilia_mexicana
ENSPLAG00000000946	zgc:162730	84	37.333	ENSPREG00000017495	sb:cb81	77	37.079	Poecilia_reticulata
ENSPLAG00000000946	zgc:162730	100	97.115	ENSPREG00000021263	zgc:162730	100	97.115	Poecilia_reticulata
ENSPLAG00000000946	zgc:162730	60	36.364	ENSPREG00000021254	zgc:114130	59	40.449	Poecilia_reticulata
ENSPLAG00000000946	zgc:162730	100	71.395	ENSPNYG00000015553	zgc:162730	100	71.158	Pundamilia_nyererei
ENSPLAG00000000946	zgc:162730	90	36.524	ENSPNYG00000007502	sb:cb81	77	38.068	Pundamilia_nyererei
ENSPLAG00000000946	zgc:162730	100	45.843	ENSPNAG00000023018	zgc:162730	100	45.714	Pygocentrus_nattereri
ENSPLAG00000000946	zgc:162730	50	37.037	ENSPNAG00000023029	zgc:114130	93	31.818	Pygocentrus_nattereri
ENSPLAG00000000946	zgc:162730	69	42.434	ENSPNAG00000030063	sb:cb81	53	48.444	Pygocentrus_nattereri
ENSPLAG00000000946	zgc:162730	100	71.329	ENSSMAG00000018612	zgc:162730	100	72.028	Scophthalmus_maximus
ENSPLAG00000000946	zgc:162730	60	36.000	ENSSMAG00000018621	zgc:114130	68	34.688	Scophthalmus_maximus
ENSPLAG00000000946	zgc:162730	100	73.611	ENSSDUG00000002247	zgc:162730	100	74.306	Seriola_dumerili
ENSPLAG00000000946	zgc:162730	75	34.706	ENSSDUG00000002237	zgc:114130	60	38.722	Seriola_dumerili
ENSPLAG00000000946	zgc:162730	84	38.482	ENSSDUG00000004426	sb:cb81	77	38.936	Seriola_dumerili
ENSPLAG00000000946	zgc:162730	84	38.482	ENSSLDG00000018035	sb:cb81	78	38.936	Seriola_lalandi_dorsalis
ENSPLAG00000000946	zgc:162730	75	35.030	ENSSLDG00000008496	zgc:114130	60	38.113	Seriola_lalandi_dorsalis
ENSPLAG00000000946	zgc:162730	100	73.611	ENSSLDG00000008502	zgc:162730	100	74.306	Seriola_lalandi_dorsalis
ENSPLAG00000000946	zgc:162730	100	77.230	ENSSPAG00000006851	zgc:162730	100	77.934	Stegastes_partitus
ENSPLAG00000000946	zgc:162730	65	39.007	ENSSPAG00000013546	sb:cb81	81	38.333	Stegastes_partitus
ENSPLAG00000000946	zgc:162730	100	68.545	ENSTRUG00000021229	zgc:162730	100	69.249	Takifugu_rubripes
ENSPLAG00000000946	zgc:162730	85	36.413	ENSTRUG00000020720	sb:cb81	54	41.004	Takifugu_rubripes
ENSPLAG00000000946	zgc:162730	94	63.409	ENSTNIG00000000183	zgc:162730	98	66.165	Tetraodon_nigroviridis
ENSPLAG00000000946	zgc:162730	100	93.510	ENSXCOG00000012791	zgc:162730	100	93.510	Xiphophorus_couchianus
ENSPLAG00000000946	zgc:162730	51	45.794	ENSXMAG00000004681	sb:cb81	76	38.329	Xiphophorus_maculatus
ENSPLAG00000000946	zgc:162730	100	93.990	ENSXMAG00000018206	zgc:162730	100	93.990	Xiphophorus_maculatus