EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000000947 (Gene tree)
Gene ID: 106953934
Gene Symbol: zgc:114130
Alias: -
Full Name: zinc finger protein 36%2C C3H1 type-like 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6201 bases
Position: chrKQ545929.1:199936-206136
Accession: 106953934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019103	zf-CCCH	PF00642.24	2.4e-20	1	2
ENSPLAP00000019103	zf-CCCH	PF00642.24	2.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016879	-	3217	XM_015043073	ENSPLAP00000019103	431 (aa)	XP_014898559	UPI00072E58E6

Gene Model

Click here to download ENSPLAG00000000947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000000947's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000000947	zgc:114130	59	39.925	ENSPLAG00000000946	zgc:162730	50	40.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000000947	zgc:114130	100	69.021	ENSAPOG00000014912	zgc:114130	98	68.793	Acanthochromis_polyacanthus
ENSPLAG00000000947	zgc:114130	83	66.391	ENSACIG00000017364	zgc:114130	96	67.769	Amphilophus_citrinellus
ENSPLAG00000000947	zgc:114130	100	68.337	ENSAOCG00000022227	zgc:114130	98	68.109	Amphiprion_ocellaris
ENSPLAG00000000947	zgc:114130	100	68.109	ENSAPEG00000015497	zgc:114130	98	67.882	Amphiprion_percula
ENSPLAG00000000947	zgc:114130	100	67.955	ENSATEG00000008781	zgc:114130	98	66.818	Anabas_testudineus
ENSPLAG00000000947	zgc:114130	100	65.138	ENSACLG00000022113	zgc:114130	98	64.908	Astatotilapia_calliptera
ENSPLAG00000000947	zgc:114130	63	37.248	ENSACLG00000013759	sb:cb81	60	42.014	Astatotilapia_calliptera
ENSPLAG00000000947	zgc:114130	100	43.237	ENSAMXG00000038581	zgc:114130	95	42.984	Astyanax_mexicanus
ENSPLAG00000000947	zgc:114130	74	38.739	ENSAMXG00000034874	sb:cb81	73	37.126	Astyanax_mexicanus
ENSPLAG00000000947	zgc:114130	57	38.372	ENSCSEG00000018283	zgc:162730	94	30.859	Cynoglossus_semilaevis
ENSPLAG00000000947	zgc:114130	100	59.685	ENSCSEG00000018290	zgc:114130	98	60.407	Cynoglossus_semilaevis
ENSPLAG00000000947	zgc:114130	100	79.350	ENSCVAG00000018574	zgc:114130	100	77.726	Cyprinodon_variegatus
ENSPLAG00000000947	zgc:114130	99	37.162	ENSDARG00000040503	sb:cb81	99	35.360	Danio_rerio
ENSPLAG00000000947	zgc:114130	100	45.147	ENSDARG00000040725	zgc:114130	96	44.570	Danio_rerio
ENSPLAG00000000947	zgc:114130	99	34.889	ENSELUG00000013045	sb:cb81	74	36.499	Esox_lucius
ENSPLAG00000000947	zgc:114130	100	46.380	ENSELUG00000013151	zgc:114130	97	46.259	Esox_lucius
ENSPLAG00000000947	zgc:114130	100	75.982	ENSFHEG00000000656	zgc:114130	100	77.136	Fundulus_heteroclitus
ENSPLAG00000000947	zgc:114130	79	52.616	ENSGMOG00000017223	zgc:114130	99	53.198	Gadus_morhua
ENSPLAG00000000947	zgc:114130	81	88.319	ENSGAFG00000009949	zgc:114130	93	87.179	Gambusia_affinis
ENSPLAG00000000947	zgc:114130	79	67.941	ENSGACG00000008344	zgc:114130	99	66.862	Gasterosteus_aculeatus
ENSPLAG00000000947	zgc:114130	100	65.596	ENSHBUG00000015051	zgc:114130	98	66.055	Haplochromis_burtoni
ENSPLAG00000000947	zgc:114130	100	57.604	ENSHCOG00000015800	zgc:114130	96	56.109	Hippocampus_comes
ENSPLAG00000000947	zgc:114130	100	41.284	ENSIPUG00000018256	zgc:114130	79	39.862	Ictalurus_punctatus
ENSPLAG00000000947	zgc:114130	62	39.051	ENSIPUG00000011378	sb:cb81	68	37.591	Ictalurus_punctatus
ENSPLAG00000000947	zgc:114130	100	68.552	ENSKMAG00000019287	zgc:114130	98	67.946	Kryptolebias_marmoratus
ENSPLAG00000000947	zgc:114130	100	62.212	ENSLBEG00000018387	zgc:114130	98	61.468	Labrus_bergylta
ENSPLAG00000000947	zgc:114130	99	36.613	ENSLACG00000015732	sb:cb81	99	35.321	Latimeria_chalumnae
ENSPLAG00000000947	zgc:114130	74	36.310	ENSLOCG00000014587	sb:cb81	74	37.572	Lepisosteus_oculatus
ENSPLAG00000000947	zgc:114130	100	64.747	ENSMAMG00000007511	zgc:114130	96	65.207	Mastacembelus_armatus
ENSPLAG00000000947	zgc:114130	77	35.530	ENSMAMG00000007516	zgc:162730	58	39.855	Mastacembelus_armatus
ENSPLAG00000000947	zgc:114130	63	37.124	ENSMZEG00005024684	sb:cb81	60	42.014	Maylandia_zebra
ENSPLAG00000000947	zgc:114130	100	65.367	ENSMZEG00005014410	zgc:114130	98	65.596	Maylandia_zebra
ENSPLAG00000000947	zgc:114130	63	38.384	ENSMZEG00005016001	-	60	42.014	Maylandia_zebra
ENSPLAG00000000947	zgc:114130	84	66.213	ENSMMOG00000011504	zgc:114130	96	67.302	Mola_mola
ENSPLAG00000000947	zgc:114130	80	63.873	ENSNBRG00000013703	zgc:114130	94	63.006	Neolamprologus_brichardi
ENSPLAG00000000947	zgc:114130	79	64.638	ENSONIG00000005004	zgc:114130	99	64.740	Oreochromis_niloticus
ENSPLAG00000000947	zgc:114130	64	36.918	ENSORLG00015010105	sb:cb81	76	38.484	Oryzias_latipes_hsok
ENSPLAG00000000947	zgc:114130	59	39.552	ENSPFOG00000003665	zgc:162730	50	39.648	Poecilia_formosa
ENSPLAG00000000947	zgc:114130	100	98.383	ENSPFOG00000003653	zgc:114130	100	98.383	Poecilia_formosa
ENSPLAG00000000947	zgc:114130	100	95.150	ENSPMEG00000015335	zgc:114130	100	95.381	Poecilia_mexicana
ENSPLAG00000000947	zgc:114130	59	39.552	ENSPMEG00000000341	zgc:162730	50	39.648	Poecilia_mexicana
ENSPLAG00000000947	zgc:114130	59	40.075	ENSPREG00000021263	zgc:162730	60	37.226	Poecilia_reticulata
ENSPLAG00000000947	zgc:114130	64	35.714	ENSPREG00000017495	sb:cb81	64	37.171	Poecilia_reticulata
ENSPLAG00000000947	zgc:114130	100	95.360	ENSPREG00000021254	zgc:114130	100	95.360	Poecilia_reticulata
ENSPLAG00000000947	zgc:114130	100	65.138	ENSPNYG00000015546	zgc:114130	98	64.679	Pundamilia_nyererei
ENSPLAG00000000947	zgc:114130	100	38.170	ENSPNAG00000023029	zgc:114130	96	39.479	Pygocentrus_nattereri
ENSPLAG00000000947	zgc:114130	66	37.979	ENSSFOG00015003179	sb:cb81	99	30.435	Scleropages_formosus
ENSPLAG00000000947	zgc:114130	100	63.781	ENSSMAG00000018621	zgc:114130	95	63.554	Scophthalmus_maximus
ENSPLAG00000000947	zgc:114130	100	69.545	ENSSDUG00000002237	zgc:114130	100	66.741	Seriola_dumerili
ENSPLAG00000000947	zgc:114130	100	69.021	ENSSLDG00000008496	zgc:114130	100	66.518	Seriola_lalandi_dorsalis
ENSPLAG00000000947	zgc:114130	100	69.266	ENSSPAG00000006856	zgc:114130	98	68.807	Stegastes_partitus
ENSPLAG00000000947	zgc:114130	100	59.725	ENSTRUG00000022473	zgc:114130	98	59.453	Takifugu_rubripes
ENSPLAG00000000947	zgc:114130	64	36.986	ENSTRUG00000020720	sb:cb81	65	38.305	Takifugu_rubripes
ENSPLAG00000000947	zgc:114130	91	76.471	ENSXCOG00000012792	zgc:114130	96	75.959	Xiphophorus_couchianus
ENSPLAG00000000947	zgc:114130	100	95.128	ENSXMAG00000026836	zgc:114130	100	94.664	Xiphophorus_maculatus