EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000001016 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6718 bases
Position: chrKQ545926.1:74255-80972
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000224	MMR_HSR1	PF01926.23	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016784	-	468	-	ENSPLAP00000000224	155 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000001016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000001016	-	55	33.721	ENSPLAG00000000576	arl11	54	33.721
ENSPLAG00000001016	-	63	37.374	ENSPLAG00000001041	-	55	37.374
ENSPLAG00000001016	-	61	32.632	ENSPLAG00000004167	arl8a	51	32.632
ENSPLAG00000001016	-	69	34.579	ENSPLAG00000012381	arl2	58	34.579
ENSPLAG00000001016	-	75	82.906	ENSPLAG00000023705	sar1ab	59	82.906
ENSPLAG00000001016	-	63	36.364	ENSPLAG00000020696	arf2b	55	36.364
ENSPLAG00000001016	-	57	38.202	ENSPLAG00000021807	arl8	50	38.202
ENSPLAG00000001016	-	61	32.292	ENSPLAG00000007941	-	51	32.632
ENSPLAG00000001016	-	59	40.000	ENSPLAG00000007217	-	63	40.000
ENSPLAG00000001016	-	61	32.292	ENSPLAG00000020975	arl8ba	51	32.632
ENSPLAG00000001016	-	64	33.333	ENSPLAG00000002394	arl5c	56	33.333
ENSPLAG00000001016	-	63	37.255	ENSPLAG00000000596	-	57	37.255
ENSPLAG00000001016	-	64	35.644	ENSPLAG00000008306	ARL6	54	35.644
ENSPLAG00000001016	-	60	36.559	ENSPLAG00000015630	-	52	36.559
ENSPLAG00000001016	-	60	37.634	ENSPLAG00000006742	arf5	52	37.634
ENSPLAG00000001016	-	68	35.514	ENSPLAG00000008384	arl3l2	57	35.514
ENSPLAG00000001016	-	57	35.955	ENSPLAG00000015887	-	50	35.955
ENSPLAG00000001016	-	63	34.343	ENSPLAG00000012898	arl1	55	34.343
ENSPLAG00000001016	-	64	35.644	ENSPLAG00000012234	-	51	35.644
ENSPLAG00000001016	-	58	36.170	ENSPLAG00000017362	arl14	54	36.170
ENSPLAG00000001016	-	72	30.508	ENSPLAG00000001962	arl3	57	30.508
ENSPLAG00000001016	-	85	80.303	ENSPLAG00000012223	sar1b	85	86.441
ENSPLAG00000001016	-	60	35.484	ENSPLAG00000015550	arf3b	51	35.484
ENSPLAG00000001016	-	60	35.484	ENSPLAG00000020941	-	51	35.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001016	-	75	87.179	ENSAPOG00000007186	sar1b	59	87.179	Acanthochromis_polyacanthus
ENSPLAG00000001016	-	80	88.710	ENSAPOG00000017891	-	90	93.162	Acanthochromis_polyacanthus
ENSPLAG00000001016	-	75	92.308	ENSACIG00000024513	-	59	92.308	Amphilophus_citrinellus
ENSPLAG00000001016	-	75	86.325	ENSACIG00000013634	sar1b	59	86.325	Amphilophus_citrinellus
ENSPLAG00000001016	-	75	86.325	ENSAOCG00000005888	sar1b	59	86.325	Amphiprion_ocellaris
ENSPLAG00000001016	-	80	88.710	ENSAOCG00000002627	-	90	93.162	Amphiprion_ocellaris
ENSPLAG00000001016	-	77	93.277	ENSAPEG00000019680	-	89	93.277	Amphiprion_percula
ENSPLAG00000001016	-	75	86.325	ENSAPEG00000022771	sar1b	59	86.325	Amphiprion_percula
ENSPLAG00000001016	-	75	93.162	ENSATEG00000023368	-	59	93.162	Anabas_testudineus
ENSPLAG00000001016	-	75	87.179	ENSATEG00000012904	sar1b	59	87.179	Anabas_testudineus
ENSPLAG00000001016	-	75	86.325	ENSACAG00000001470	-	59	86.325	Anolis_carolinensis
ENSPLAG00000001016	-	75	92.308	ENSACLG00000005011	-	59	92.308	Astatotilapia_calliptera
ENSPLAG00000001016	-	75	85.470	ENSACLG00000014649	sar1b	59	85.470	Astatotilapia_calliptera
ENSPLAG00000001016	-	90	79.856	ENSAMXG00000018108	sar1b	85	90.678	Astyanax_mexicanus
ENSPLAG00000001016	-	77	90.833	ENSAMXG00000034192	-	80	92.982	Astyanax_mexicanus
ENSPLAG00000001016	-	77	90.833	ENSCSEG00000016976	-	61	90.833	Cynoglossus_semilaevis
ENSPLAG00000001016	-	65	88.119	ENSCSEG00000015238	sar1b	57	78.632	Cynoglossus_semilaevis
ENSPLAG00000001016	-	75	89.744	ENSCVAG00000022959	sar1b	59	89.744	Cyprinodon_variegatus
ENSPLAG00000001016	-	75	89.744	ENSDARG00000103403	sar1b	59	89.744	Danio_rerio
ENSPLAG00000001016	-	74	71.930	FBgn0038947	Sar1	57	71.930	Drosophila_melanogaster
ENSPLAG00000001016	-	71	81.818	ENSEBUG00000011723	sar1b	56	81.818	Eptatretus_burgeri
ENSPLAG00000001016	-	75	90.598	ENSELUG00000020912	sar1b	59	90.598	Esox_lucius
ENSPLAG00000001016	-	75	89.744	ENSFHEG00000019865	sar1b	59	89.744	Fundulus_heteroclitus
ENSPLAG00000001016	-	75	88.889	ENSGMOG00000008023	sar1b	59	88.889	Gadus_morhua
ENSPLAG00000001016	-	75	86.325	ENSGAFG00000007081	sar1b	59	86.325	Gambusia_affinis
ENSPLAG00000001016	-	75	85.470	ENSGACG00000001474	sar1b	59	85.470	Gasterosteus_aculeatus
ENSPLAG00000001016	-	75	85.470	ENSHBUG00000000915	sar1b	59	85.470	Haplochromis_burtoni
ENSPLAG00000001016	-	75	92.308	ENSHBUG00000018397	-	63	92.308	Haplochromis_burtoni
ENSPLAG00000001016	-	75	87.931	ENSHCOG00000010953	sar1b	59	87.931	Hippocampus_comes
ENSPLAG00000001016	-	75	88.034	ENSIPUG00000020925	sar1b	59	88.034	Ictalurus_punctatus
ENSPLAG00000001016	-	77	88.235	ENSIPUG00000010046	sar1b	84	88.235	Ictalurus_punctatus
ENSPLAG00000001016	-	75	93.966	ENSKMAG00000014875	-	89	93.966	Kryptolebias_marmoratus
ENSPLAG00000001016	-	75	88.034	ENSKMAG00000019693	sar1b	59	88.034	Kryptolebias_marmoratus
ENSPLAG00000001016	-	75	91.453	ENSLBEG00000016945	-	59	91.453	Labrus_bergylta
ENSPLAG00000001016	-	75	84.615	ENSLBEG00000027550	sar1b	59	84.615	Labrus_bergylta
ENSPLAG00000001016	-	69	63.717	ENSLACG00000017029	-	57	63.717	Latimeria_chalumnae
ENSPLAG00000001016	-	75	81.197	ENSLACG00000010795	sar1b	59	81.197	Latimeria_chalumnae
ENSPLAG00000001016	-	75	88.889	ENSLOCG00000005214	-	59	88.889	Lepisosteus_oculatus
ENSPLAG00000001016	-	75	88.889	ENSLOCG00000010197	sar1b	59	88.889	Lepisosteus_oculatus
ENSPLAG00000001016	-	75	84.615	ENSMAMG00000021732	sar1b	59	84.615	Mastacembelus_armatus
ENSPLAG00000001016	-	75	85.470	ENSMZEG00005008942	sar1b	59	85.470	Maylandia_zebra
ENSPLAG00000001016	-	75	92.308	ENSMZEG00005001012	-	59	92.308	Maylandia_zebra
ENSPLAG00000001016	-	63	88.776	ENSMGAG00000005387	-	50	88.776	Meleagris_gallopavo
ENSPLAG00000001016	-	75	90.598	ENSMMOG00000013803	-	59	90.598	Mola_mola
ENSPLAG00000001016	-	75	86.325	ENSMALG00000016635	sar1b	54	86.325	Monopterus_albus
ENSPLAG00000001016	-	75	92.308	ENSNBRG00000014004	-	59	92.308	Neolamprologus_brichardi
ENSPLAG00000001016	-	75	85.470	ENSNBRG00000008013	sar1b	59	85.470	Neolamprologus_brichardi
ENSPLAG00000001016	-	75	86.325	ENSONIG00000017278	sar1b	59	86.325	Oreochromis_niloticus
ENSPLAG00000001016	-	75	88.889	ENSORLG00000000932	sar1b	59	88.889	Oryzias_latipes
ENSPLAG00000001016	-	75	88.889	ENSORLG00020021985	sar1b	59	88.889	Oryzias_latipes_hni
ENSPLAG00000001016	-	75	88.889	ENSORLG00015007044	sar1b	59	88.889	Oryzias_latipes_hsok
ENSPLAG00000001016	-	75	88.034	ENSOMEG00000001052	sar1b	72	91.262	Oryzias_melastigma
ENSPLAG00000001016	-	75	90.598	ENSPKIG00000017353	-	89	90.435	Paramormyrops_kingsleyae
ENSPLAG00000001016	-	75	88.034	ENSPKIG00000010688	sar1b	59	88.034	Paramormyrops_kingsleyae
ENSPLAG00000001016	-	83	81.395	ENSPMGG00000001234	sar1b	91	87.069	Periophthalmus_magnuspinnatus
ENSPLAG00000001016	-	75	78.333	ENSPMAG00000003593	sar1b	60	78.333	Petromyzon_marinus
ENSPLAG00000001016	-	75	85.470	ENSPFOG00000005666	sar1b	59	85.470	Poecilia_formosa
ENSPLAG00000001016	-	75	85.470	ENSPMEG00000016831	sar1b	88	85.088	Poecilia_mexicana
ENSPLAG00000001016	-	86	89.630	ENSPREG00000002020	-	87	100.000	Poecilia_reticulata
ENSPLAG00000001016	-	75	85.470	ENSPREG00000005312	sar1b	53	85.470	Poecilia_reticulata
ENSPLAG00000001016	-	75	85.470	ENSPNYG00000012440	sar1b	59	85.470	Pundamilia_nyererei
ENSPLAG00000001016	-	75	91.453	ENSPNYG00000021357	-	59	91.453	Pundamilia_nyererei
ENSPLAG00000001016	-	77	90.000	ENSPNAG00000001123	-	61	90.000	Pygocentrus_nattereri
ENSPLAG00000001016	-	75	89.744	ENSPNAG00000014683	sar1b	59	89.744	Pygocentrus_nattereri
ENSPLAG00000001016	-	90	79.577	ENSSFOG00015020051	sar1b	98	78.169	Scleropages_formosus
ENSPLAG00000001016	-	75	89.744	ENSSFOG00015018128	-	59	89.744	Scleropages_formosus
ENSPLAG00000001016	-	75	92.308	ENSSMAG00000002165	-	59	92.308	Scophthalmus_maximus
ENSPLAG00000001016	-	77	91.667	ENSSDUG00000019629	-	92	91.667	Seriola_dumerili
ENSPLAG00000001016	-	77	87.395	ENSSDUG00000020926	sar1b	96	87.395	Seriola_dumerili
ENSPLAG00000001016	-	75	88.034	ENSSLDG00000017052	sar1b	94	89.815	Seriola_lalandi_dorsalis
ENSPLAG00000001016	-	75	93.162	ENSSLDG00000024197	-	59	93.162	Seriola_lalandi_dorsalis
ENSPLAG00000001016	-	75	85.470	ENSSPUG00000010247	-	59	85.470	Sphenodon_punctatus
ENSPLAG00000001016	-	75	93.162	ENSSPAG00000015626	-	59	93.162	Stegastes_partitus
ENSPLAG00000001016	-	75	88.889	ENSSPAG00000017634	sar1b	59	88.889	Stegastes_partitus
ENSPLAG00000001016	-	75	84.615	ENSTRUG00000023908	sar1b	59	84.615	Takifugu_rubripes
ENSPLAG00000001016	-	75	82.906	ENSTNIG00000016097	sar1b	59	82.906	Tetraodon_nigroviridis
ENSPLAG00000001016	-	75	75.862	ENSXCOG00000004160	sar1b	56	75.862	Xiphophorus_couchianus
ENSPLAG00000001016	-	74	99.130	ENSXCOG00000006154	-	77	99.130	Xiphophorus_couchianus
ENSPLAG00000001016	-	75	86.325	ENSXMAG00000008294	sar1b	90	82.500	Xiphophorus_maculatus