EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001035 (Gene tree)
Gene ID: 106953888
Gene Symbol: gpatch8
Alias: -
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 27730 bases
Position: chrKQ545925.1:247995-275724
Accession: 106953888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000247	zf-C2H2_jaz	PF12171.8	5.1e-06	1	1
ENSPLAP00000000247	G-patch	PF01585.23	9.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016758	-	5960	XM_015042986	ENSPLAP00000000247	1488 (aa)	XP_014898472	UPI00072E7F44

Gene Model

Click here to download ENSPLAG00000001035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001035's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001035	gpatch8	100	84.225	ENSAPOG00000023938	gpatch8	55	79.373	Acanthochromis_polyacanthus
ENSPLAG00000001035	gpatch8	100	82.800	ENSACIG00000012241	gpatch8	100	82.533	Amphilophus_citrinellus
ENSPLAG00000001035	gpatch8	100	84.091	ENSAOCG00000018102	gpatch8	55	78.649	Amphiprion_ocellaris
ENSPLAG00000001035	gpatch8	100	84.024	ENSAPEG00000016776	gpatch8	100	83.824	Amphiprion_percula
ENSPLAG00000001035	gpatch8	100	82.620	ENSACLG00000004165	gpatch8	100	82.687	Astatotilapia_calliptera
ENSPLAG00000001035	gpatch8	52	65.276	ENSAMXG00000041683	gpatch8	56	59.474	Astyanax_mexicanus
ENSPLAG00000001035	gpatch8	100	77.785	ENSCSEG00000021277	gpatch8	100	77.652	Cynoglossus_semilaevis
ENSPLAG00000001035	gpatch8	100	88.503	ENSCVAG00000013477	gpatch8	100	88.302	Cyprinodon_variegatus
ENSPLAG00000001035	gpatch8	100	63.144	ENSDARG00000059768	gpatch8	55	60.165	Danio_rerio
ENSPLAG00000001035	gpatch8	61	63.212	ENSELUG00000019920	gpatch8	56	63.073	Esox_lucius
ENSPLAG00000001035	gpatch8	100	96.640	ENSGAFG00000018138	gpatch8	100	96.102	Gambusia_affinis
ENSPLAG00000001035	gpatch8	100	82.121	ENSHBUG00000002669	gpatch8	100	82.121	Haplochromis_burtoni
ENSPLAG00000001035	gpatch8	74	55.412	ENSHGLG00100010738	GPATCH8	64	61.157	Heterocephalus_glaber_male
ENSPLAG00000001035	gpatch8	100	72.333	ENSHCOG00000017518	gpatch8	56	67.995	Hippocampus_comes
ENSPLAG00000001035	gpatch8	59	60.220	ENSIPUG00000015431	gpatch8	55	59.719	Ictalurus_punctatus
ENSPLAG00000001035	gpatch8	100	83.813	ENSKMAG00000018364	gpatch8	55	80.579	Kryptolebias_marmoratus
ENSPLAG00000001035	gpatch8	100	79.467	ENSLBEG00000023352	gpatch8	100	79.133	Labrus_bergylta
ENSPLAG00000001035	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	75	75.887	Lepisosteus_oculatus
ENSPLAG00000001035	gpatch8	100	81.367	ENSMAMG00000001618	gpatch8	100	81.382	Mastacembelus_armatus
ENSPLAG00000001035	gpatch8	100	82.553	ENSMZEG00005022584	gpatch8	100	82.620	Maylandia_zebra
ENSPLAG00000001035	gpatch8	61	77.535	ENSMMOG00000020472	gpatch8	55	75.331	Mola_mola
ENSPLAG00000001035	gpatch8	100	79.559	ENSMALG00000004204	gpatch8	55	75.151	Monopterus_albus
ENSPLAG00000001035	gpatch8	50	63.584	ENSMLUG00000013840	GPATCH8	52	63.314	Myotis_lucifugus
ENSPLAG00000001035	gpatch8	100	82.322	ENSNBRG00000016402	gpatch8	100	82.322	Neolamprologus_brichardi
ENSPLAG00000001035	gpatch8	100	79.799	ENSONIG00000001292	gpatch8	100	81.232	Oreochromis_niloticus
ENSPLAG00000001035	gpatch8	61	76.739	ENSORLG00000028497	gpatch8	56	74.940	Oryzias_latipes
ENSPLAG00000001035	gpatch8	61	75.978	ENSORLG00020006656	gpatch8	56	74.221	Oryzias_latipes_hni
ENSPLAG00000001035	gpatch8	61	76.522	ENSORLG00015019797	gpatch8	56	74.700	Oryzias_latipes_hsok
ENSPLAG00000001035	gpatch8	61	53.092	ENSPKIG00000018753	gpatch8	56	55.059	Paramormyrops_kingsleyae
ENSPLAG00000001035	gpatch8	100	99.462	ENSPFOG00000014833	gpatch8	100	99.462	Poecilia_formosa
ENSPLAG00000001035	gpatch8	100	98.656	ENSPMEG00000024032	gpatch8	100	98.667	Poecilia_mexicana
ENSPLAG00000001035	gpatch8	100	97.177	ENSPREG00000008911	gpatch8	100	97.177	Poecilia_reticulata
ENSPLAG00000001035	gpatch8	100	82.754	ENSPNYG00000009426	gpatch8	100	82.821	Pundamilia_nyererei
ENSPLAG00000001035	gpatch8	59	61.249	ENSPNAG00000016200	gpatch8	58	60.294	Pygocentrus_nattereri
ENSPLAG00000001035	gpatch8	89	64.205	ENSSFOG00015004299	GPATCH8	89	64.205	Scleropages_formosus
ENSPLAG00000001035	gpatch8	55	55.542	ENSSFOG00015021377	-	55	55.976	Scleropages_formosus
ENSPLAG00000001035	gpatch8	96	82.759	ENSSDUG00000018065	gpatch8	100	81.862	Seriola_dumerili
ENSPLAG00000001035	gpatch8	100	83.976	ENSSLDG00000009225	gpatch8	100	83.245	Seriola_lalandi_dorsalis
ENSPLAG00000001035	gpatch8	100	83.957	ENSSPAG00000011368	gpatch8	100	83.489	Stegastes_partitus
ENSPLAG00000001035	gpatch8	100	76.353	ENSTRUG00000020474	gpatch8	100	75.752	Takifugu_rubripes
ENSPLAG00000001035	gpatch8	58	62.731	ENSTBEG00000009486	GPATCH8	56	61.624	Tupaia_belangeri
ENSPLAG00000001035	gpatch8	100	96.651	ENSXCOG00000016680	gpatch8	100	96.651	Xiphophorus_couchianus
ENSPLAG00000001035	gpatch8	100	96.848	ENSXMAG00000009217	gpatch8	100	96.848	Xiphophorus_maculatus