EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001093 (Gene tree)
Gene ID: 106950638
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 5618 bases
Position: chrKQ545728.1:67680-73297
Accession: 106950638
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000286	Nucleoplasmin	PF03066.15	2e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016680	-	2147	XM_015037641	ENSPLAP00000000286	298 (aa)	XP_014893127	UPI00072DE0B9

Gene Model

Click here to download ENSPLAG00000001093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001093	npm1a	100	67.208	ENSAPOG00000002813	npm1a	100	68.182	Acanthochromis_polyacanthus
ENSPLAG00000001093	npm1a	94	70.357	ENSACIG00000014201	npm1a	100	70.000	Amphilophus_citrinellus
ENSPLAG00000001093	npm1a	89	62.642	ENSAOCG00000004978	npm1a	100	64.151	Amphiprion_ocellaris
ENSPLAG00000001093	npm1a	100	67.974	ENSAPEG00000008594	npm1a	100	68.106	Amphiprion_percula
ENSPLAG00000001093	npm1a	100	67.197	ENSATEG00000008885	npm1a	99	67.742	Anabas_testudineus
ENSPLAG00000001093	npm1a	95	66.901	ENSACLG00000008376	npm1a	94	67.254	Astatotilapia_calliptera
ENSPLAG00000001093	npm1a	99	49.492	ENSAMXG00000010155	npm1a	99	52.365	Astyanax_mexicanus
ENSPLAG00000001093	npm1a	100	54.362	ENSCSEG00000011165	npm1a	83	78.689	Cynoglossus_semilaevis
ENSPLAG00000001093	npm1a	100	69.799	ENSCVAG00000008960	npm1a	100	70.134	Cyprinodon_variegatus
ENSPLAG00000001093	npm1a	98	61.905	ENSDARG00000014329	npm1a	95	68.987	Danio_rerio
ENSPLAG00000001093	npm1a	93	35.252	ENSEBUG00000012753	npm1a	78	34.983	Eptatretus_burgeri
ENSPLAG00000001093	npm1a	100	63.036	ENSELUG00000013705	npm1a	100	64.356	Esox_lucius
ENSPLAG00000001093	npm1a	100	72.517	ENSFHEG00000012496	npm1a	100	72.517	Fundulus_heteroclitus
ENSPLAG00000001093	npm1a	100	82.895	ENSGAFG00000013059	npm1a	100	82.237	Gambusia_affinis
ENSPLAG00000001093	npm1a	99	65.772	ENSGACG00000020319	npm1a	99	65.772	Gasterosteus_aculeatus
ENSPLAG00000001093	npm1a	99	67.085	ENSHBUG00000000776	npm1a	100	67.398	Haplochromis_burtoni
ENSPLAG00000001093	npm1a	100	50.825	ENSHCOG00000001059	npm1a	99	52.159	Hippocampus_comes
ENSPLAG00000001093	npm1a	98	58.824	ENSIPUG00000019452	npm1	99	58.824	Ictalurus_punctatus
ENSPLAG00000001093	npm1a	100	71.333	ENSKMAG00000010709	npm1a	100	69.463	Kryptolebias_marmoratus
ENSPLAG00000001093	npm1a	100	66.340	ENSLBEG00000008793	npm1a	100	65.359	Labrus_bergylta
ENSPLAG00000001093	npm1a	85	53.261	ENSLOCG00000009683	npm1a	100	53.261	Lepisosteus_oculatus
ENSPLAG00000001093	npm1a	100	66.230	ENSMAMG00000009344	npm1a	83	66.230	Mastacembelus_armatus
ENSPLAG00000001093	npm1a	99	66.667	ENSMZEG00005013717	npm1a	100	66.981	Maylandia_zebra
ENSPLAG00000001093	npm1a	95	65.505	ENSMMOG00000007980	npm1a	100	65.505	Mola_mola
ENSPLAG00000001093	npm1a	100	67.224	ENSMALG00000001146	npm1a	100	67.224	Monopterus_albus
ENSPLAG00000001093	npm1a	99	63.043	ENSNBRG00000013172	npm1a	100	63.438	Neolamprologus_brichardi
ENSPLAG00000001093	npm1a	99	66.556	ENSONIG00000001860	npm1a	98	67.219	Oreochromis_niloticus
ENSPLAG00000001093	npm1a	100	66.337	ENSORLG00000010179	npm1a	100	66.667	Oryzias_latipes
ENSPLAG00000001093	npm1a	100	68.212	ENSORLG00020020817	npm1a	100	68.543	Oryzias_latipes_hni
ENSPLAG00000001093	npm1a	100	66.337	ENSORLG00015003439	npm1a	100	66.667	Oryzias_latipes_hsok
ENSPLAG00000001093	npm1a	100	68.977	ENSOMEG00000007083	npm1a	100	68.977	Oryzias_melastigma
ENSPLAG00000001093	npm1a	100	51.634	ENSPKIG00000023943	npm1a	100	51.961	Paramormyrops_kingsleyae
ENSPLAG00000001093	npm1a	100	54.849	ENSPMGG00000011716	npm1a	100	54.181	Periophthalmus_magnuspinnatus
ENSPLAG00000001093	npm1a	100	97.010	ENSPFOG00000019173	npm1a	100	97.010	Poecilia_formosa
ENSPLAG00000001093	npm1a	100	97.010	ENSPMEG00000012523	npm1a	100	97.010	Poecilia_mexicana
ENSPLAG00000001093	npm1a	100	88.119	ENSPREG00000001647	npm1a	100	87.789	Poecilia_reticulata
ENSPLAG00000001093	npm1a	99	68.790	ENSPNYG00000019321	npm1a	100	70.064	Pundamilia_nyererei
ENSPLAG00000001093	npm1a	99	56.436	ENSPNAG00000026891	npm1a	99	57.756	Pygocentrus_nattereri
ENSPLAG00000001093	npm1a	100	59.736	ENSSFOG00015007074	npm1a	100	59.136	Scleropages_formosus
ENSPLAG00000001093	npm1a	100	67.763	ENSSMAG00000019090	npm1a	100	70.066	Scophthalmus_maximus
ENSPLAG00000001093	npm1a	100	66.557	ENSSDUG00000015609	npm1a	100	66.885	Seriola_dumerili
ENSPLAG00000001093	npm1a	100	65.217	ENSSLDG00000017849	npm1a	100	65.217	Seriola_lalandi_dorsalis
ENSPLAG00000001093	npm1a	100	62.207	ENSSPAG00000021660	npm1a	100	62.207	Stegastes_partitus
ENSPLAG00000001093	npm1a	100	68.285	ENSTRUG00000024003	npm1a	100	68.608	Takifugu_rubripes
ENSPLAG00000001093	npm1a	100	66.890	ENSTNIG00000010773	npm1a	100	67.893	Tetraodon_nigroviridis
ENSPLAG00000001093	npm1a	93	87.143	ENSXCOG00000005958	npm1a	100	86.071	Xiphophorus_couchianus
ENSPLAG00000001093	npm1a	100	88.449	ENSXMAG00000000396	npm1a	100	88.119	Xiphophorus_maculatus