EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000001156 (Gene tree)
Gene ID: 106953835
Gene Symbol: srprb
Alias: -
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3798 bases
Position: chrKQ545922.1:10005-13802
Accession: 106953835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000347	MMR_HSR1	PF01926.23	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016588	-	1958	XM_015042893	ENSPLAP00000000347	258 (aa)	XP_014898379	UPI00072EDD3E

Gene Model

Click here to download ENSPLAG00000001156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000001156	srprb	73	30.319	ENSPLAG00000020941	-	96	30.319
ENSPLAG00000001156	srprb	66	30.409	ENSPLAG00000000596	-	88	30.409
ENSPLAG00000001156	srprb	62	31.250	ENSPLAG00000020696	arf2b	83	31.250
ENSPLAG00000001156	srprb	66	30.994	ENSPLAG00000001041	-	88	30.994
ENSPLAG00000001156	srprb	73	30.319	ENSPLAG00000015550	arf3b	96	30.319

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001156	srprb	100	89.147	ENSAPOG00000021219	srprb	93	89.147	Acanthochromis_polyacanthus
ENSPLAG00000001156	srprb	99	88.235	ENSACIG00000014621	srprb	96	88.235	Amphilophus_citrinellus
ENSPLAG00000001156	srprb	100	87.597	ENSAOCG00000017265	srprb	93	87.597	Amphiprion_ocellaris
ENSPLAG00000001156	srprb	100	87.597	ENSAPEG00000024541	srprb	82	87.597	Amphiprion_percula
ENSPLAG00000001156	srprb	99	87.843	ENSATEG00000014016	srprb	93	87.843	Anabas_testudineus
ENSPLAG00000001156	srprb	100	88.031	ENSACLG00000016748	srprb	94	88.031	Astatotilapia_calliptera
ENSPLAG00000001156	srprb	98	72.222	ENSAMXG00000044118	srprb	95	72.222	Astyanax_mexicanus
ENSPLAG00000001156	srprb	100	83.721	ENSCSEG00000017194	srprb	94	83.721	Cynoglossus_semilaevis
ENSPLAG00000001156	srprb	100	91.860	ENSCVAG00000004221	srprb	97	91.860	Cyprinodon_variegatus
ENSPLAG00000001156	srprb	98	70.238	ENSDARG00000030949	srprb	95	70.238	Danio_rerio
ENSPLAG00000001156	srprb	99	80.469	ENSELUG00000009740	srprb	94	80.469	Esox_lucius
ENSPLAG00000001156	srprb	100	93.411	ENSFHEG00000006004	srprb	97	93.411	Fundulus_heteroclitus
ENSPLAG00000001156	srprb	98	84.980	ENSGMOG00000002081	srprb	94	84.980	Gadus_morhua
ENSPLAG00000001156	srprb	100	98.062	ENSGAFG00000012593	srprb	97	98.062	Gambusia_affinis
ENSPLAG00000001156	srprb	100	86.822	ENSGACG00000009891	srprb	95	86.822	Gasterosteus_aculeatus
ENSPLAG00000001156	srprb	100	88.031	ENSHBUG00000002145	srprb	94	88.031	Haplochromis_burtoni
ENSPLAG00000001156	srprb	100	82.890	ENSHCOG00000007732	srprb	99	82.890	Hippocampus_comes
ENSPLAG00000001156	srprb	98	67.460	ENSIPUG00000004177	srprb	94	67.460	Ictalurus_punctatus
ENSPLAG00000001156	srprb	100	87.209	ENSKMAG00000020736	srprb	97	87.209	Kryptolebias_marmoratus
ENSPLAG00000001156	srprb	99	88.281	ENSLBEG00000021483	srprb	93	88.281	Labrus_bergylta
ENSPLAG00000001156	srprb	100	70.656	ENSLOCG00000009740	srprb	87	69.112	Lepisosteus_oculatus
ENSPLAG00000001156	srprb	100	88.372	ENSMAMG00000011876	srprb	94	88.372	Mastacembelus_armatus
ENSPLAG00000001156	srprb	100	87.259	ENSMZEG00005016621	srprb	100	87.259	Maylandia_zebra
ENSPLAG00000001156	srprb	100	87.597	ENSMMOG00000012550	srprb	95	87.597	Mola_mola
ENSPLAG00000001156	srprb	100	87.209	ENSMALG00000012595	srprb	94	87.209	Monopterus_albus
ENSPLAG00000001156	srprb	73	87.831	ENSNBRG00000004699	srprb	88	81.340	Neolamprologus_brichardi
ENSPLAG00000001156	srprb	100	87.984	ENSONIG00000003788	srprb	77	87.984	Oreochromis_niloticus
ENSPLAG00000001156	srprb	100	81.783	ENSORLG00000006430	srprb	94	81.783	Oryzias_latipes
ENSPLAG00000001156	srprb	100	82.171	ENSORLG00020003413	srprb	94	82.171	Oryzias_latipes_hni
ENSPLAG00000001156	srprb	100	82.171	ENSORLG00015000166	srprb	94	82.171	Oryzias_latipes_hsok
ENSPLAG00000001156	srprb	100	83.721	ENSOMEG00000012735	srprb	94	83.721	Oryzias_melastigma
ENSPLAG00000001156	srprb	97	71.315	ENSPKIG00000013147	srprb	95	71.315	Paramormyrops_kingsleyae
ENSPLAG00000001156	srprb	98	82.609	ENSPMGG00000014061	srprb	92	82.609	Periophthalmus_magnuspinnatus
ENSPLAG00000001156	srprb	100	98.837	ENSPFOG00000011347	srprb	93	98.837	Poecilia_formosa
ENSPLAG00000001156	srprb	100	98.450	ENSPMEG00000012169	srprb	100	98.450	Poecilia_mexicana
ENSPLAG00000001156	srprb	100	97.674	ENSPREG00000001449	srprb	100	97.674	Poecilia_reticulata
ENSPLAG00000001156	srprb	100	88.031	ENSPNYG00000005911	srprb	94	88.031	Pundamilia_nyererei
ENSPLAG00000001156	srprb	98	72.222	ENSPNAG00000009983	srprb	95	72.222	Pygocentrus_nattereri
ENSPLAG00000001156	srprb	98	74.409	ENSSFOG00015019355	srprb	95	74.409	Scleropages_formosus
ENSPLAG00000001156	srprb	100	86.434	ENSSMAG00000013202	srprb	94	86.434	Scophthalmus_maximus
ENSPLAG00000001156	srprb	100	87.984	ENSSDUG00000018746	srprb	88	87.984	Seriola_dumerili
ENSPLAG00000001156	srprb	100	88.372	ENSSLDG00000020560	srprb	94	88.372	Seriola_lalandi_dorsalis
ENSPLAG00000001156	srprb	100	88.372	ENSSPAG00000008898	srprb	93	88.372	Stegastes_partitus
ENSPLAG00000001156	srprb	100	86.047	ENSTRUG00000022463	srprb	94	86.047	Takifugu_rubripes
ENSPLAG00000001156	srprb	99	82.812	ENSTNIG00000007725	srprb	98	82.812	Tetraodon_nigroviridis
ENSPLAG00000001156	srprb	100	98.062	ENSXCOG00000012585	srprb	100	98.062	Xiphophorus_couchianus
ENSPLAG00000001156	srprb	100	97.674	ENSXMAG00000028725	srprb	100	97.674	Xiphophorus_maculatus