EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPLAG00000001196 (Gene tree)
Gene ID
106935259
Gene Symbol
lig4
Alias
-
Full Name
DNA ligase 4
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
4857 bases
Position
chrKQ547247.1:38934-43790
Accession
106935259
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000000379RNA_ligasePF09414.108.3e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000016535-3786XM_015015627ENSPLAP00000000379908 (aa)XP_014871113UPI00072EA378
Gene Model
Click here to download ENSPLAG00000001196's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001196's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000001196lig49965.495ENSG00000174405LIG410066.232Homo_sapiens
ENSPLAG00000001196lig410089.035ENSAPOG00000000866lig410088.596Acanthochromis_polyacanthus
ENSPLAG00000001196lig49964.223ENSAMEG00000019685LIG49864.739Ailuropoda_melanoleuca
ENSPLAG00000001196lig49989.352ENSACIG00000018309lig49890.045Amphilophus_citrinellus
ENSPLAG00000001196lig410088.706ENSAOCG00000011768lig410088.268Amphiprion_ocellaris
ENSPLAG00000001196lig410088.925ENSAPEG00000017815lig410088.487Amphiprion_percula
ENSPLAG00000001196lig410088.487ENSATEG00000005583lig410088.158Anabas_testudineus
ENSPLAG00000001196lig49667.503ENSAPLG00000001673LIG49967.389Anas_platyrhynchos
ENSPLAG00000001196lig49967.774ENSACAG00000014566LIG49968.121Anolis_carolinensis
ENSPLAG00000001196lig49965.275ENSANAG00000012446LIG49965.517Aotus_nancymaae
ENSPLAG00000001196lig49987.816ENSACLG00000027051lig410087.390Astatotilapia_calliptera
ENSPLAG00000001196lig410080.916ENSAMXG00000008192lig49580.916Astyanax_mexicanus
ENSPLAG00000001196lig49964.725ENSBTAG00000015868LIG49964.850Bos_taurus
ENSPLAG00000001196lig49964.725ENSCJAG00000014689LIG49965.184Callithrix_jacchus
ENSPLAG00000001196lig49964.615ENSCAFG00000006031LIG49965.072Canis_familiaris
ENSPLAG00000001196lig49964.615ENSCAFG00020021230LIG49965.072Canis_lupus_dingo
ENSPLAG00000001196lig49964.615ENSCHIG00000001019LIG49964.739Capra_hircus
ENSPLAG00000001196lig49864.230ENSCAPG00000006284LIG49964.182Cavia_aperea
ENSPLAG00000001196lig49963.736ENSCPOG00000014266LIG49964.071Cavia_porcellus
ENSPLAG00000001196lig49965.275ENSCCAG00000019971LIG49965.406Cebus_capucinus
ENSPLAG00000001196lig49965.714ENSCATG00000021075LIG49965.628Cercocebus_atys
ENSPLAG00000001196lig49964.945ENSCLAG00000003376LIG49965.295Chinchilla_lanigera
ENSPLAG00000001196lig49965.385ENSCSAG00000000211LIG49965.628Chlorocebus_sabaeus
ENSPLAG00000001196lig49869.034ENSCPBG00000023291LIG49869.196Chrysemys_picta_bellii
ENSPLAG00000001196lig47046.832ENSCING00000009536-9647.310Ciona_intestinalis
ENSPLAG00000001196lig48345.000ENSCSAVG00000010336-9844.914Ciona_savignyi
ENSPLAG00000001196lig49964.835ENSCANG00000005805LIG49965.295Colobus_angolensis_palliatus
ENSPLAG00000001196lig49964.105ENSCGRG00001012072Lig49964.444Cricetulus_griseus_chok1gshd
ENSPLAG00000001196lig49964.105ENSCGRG00000013417Lig49964.444Cricetulus_griseus_crigri
ENSPLAG00000001196lig49785.152ENSCSEG00000013905lig49685.152Cynoglossus_semilaevis
ENSPLAG00000001196lig410091.566ENSCVAG00000007896lig410090.909Cyprinodon_variegatus
ENSPLAG00000001196lig410079.934ENSDARG00000060620lig410079.386Danio_rerio
ENSPLAG00000001196lig49964.654ENSDNOG00000000513LIG49964.778Dasypus_novemcinctus
ENSPLAG00000001196lig49965.385ENSDORG00000027303Lig49965.406Dipodomys_ordii
ENSPLAG00000001196lig48930.978FBgn0030506Lig48631.475Drosophila_melanogaster
ENSPLAG00000001196lig49863.304ENSETEG00000015563LIG49963.333Echinops_telfairi
ENSPLAG00000001196lig49944.911ENSEBUG00000014243lig49844.444Eptatretus_burgeri
ENSPLAG00000001196lig49964.725ENSEASG00005022073LIG49964.961Equus_asinus_asinus
ENSPLAG00000001196lig49964.505ENSECAG00000003257LIG49964.739Equus_caballus
ENSPLAG00000001196lig49883.000ENSELUG00000006787lig49883.055Esox_lucius
ENSPLAG00000001196lig49864.673ENSFCAG00000031985LIG49964.739Felis_catus
ENSPLAG00000001196lig48869.554ENSFALG00000004214LIG49670.328Ficedula_albicollis
ENSPLAG00000001196lig49963.626ENSFDAG00000008973LIG49963.626Fukomys_damarensis
ENSPLAG00000001196lig410092.325ENSFHEG00000007398lig49191.776Fundulus_heteroclitus
ENSPLAG00000001196lig48678.306ENSGMOG00000012843lig49878.312Gadus_morhua
ENSPLAG00000001196lig49965.899ENSGALG00000016854LIG49866.518Gallus_gallus
ENSPLAG00000001196lig49997.910ENSGAFG00000019779lig49697.910Gambusia_affinis
ENSPLAG00000001196lig49984.216ENSGACG00000014135lig49884.676Gasterosteus_aculeatus
ENSPLAG00000001196lig49965.275ENSGGOG00000027771LIG49965.517Gorilla_gorilla
ENSPLAG00000001196lig49987.596ENSHBUG00000006245lig410087.171Haplochromis_burtoni
ENSPLAG00000001196lig49964.286ENSHGLG00000000718LIG49964.627Heterocephalus_glaber_female
ENSPLAG00000001196lig49964.286ENSHGLG00100003265LIG49964.627Heterocephalus_glaber_male
ENSPLAG00000001196lig410082.256ENSHCOG00000012010lig410082.256Hippocampus_comes
ENSPLAG00000001196lig410078.399ENSIPUG00000013748lig49878.971Ictalurus_punctatus
ENSPLAG00000001196lig49865.781ENSSTOG00000024303LIG49965.628Ictidomys_tridecemlineatus
ENSPLAG00000001196lig49964.286ENSJJAG00000006750Lig49964.627Jaculus_jaculus
ENSPLAG00000001196lig410087.061ENSKMAG00000001149lig410087.061Kryptolebias_marmoratus
ENSPLAG00000001196lig49186.578ENSLBEG00000014578lig410086.578Labrus_bergylta
ENSPLAG00000001196lig49868.854ENSLACG00000003282LIG49868.939Latimeria_chalumnae
ENSPLAG00000001196lig49973.039ENSLOCG00000008901lig49773.326Lepisosteus_oculatus
ENSPLAG00000001196lig49964.254ENSLAFG00000031152LIG49964.262Loxodonta_africana
ENSPLAG00000001196lig49965.495ENSMFAG00000037235LIG49965.740Macaca_fascicularis
ENSPLAG00000001196lig49965.275ENSMMUG00000008874LIG49965.517Macaca_mulatta
ENSPLAG00000001196lig49965.495ENSMNEG00000023575LIG49965.740Macaca_nemestrina
ENSPLAG00000001196lig49965.275ENSMLEG00000026720LIG49965.517Mandrillus_leucophaeus
ENSPLAG00000001196lig410088.706ENSMAMG00000008472lig49988.268Mastacembelus_armatus
ENSPLAG00000001196lig49987.816ENSMZEG00005001855lig410087.390Maylandia_zebra
ENSPLAG00000001196lig49866.556ENSMGAG00000015532LIG49866.629Meleagris_gallopavo
ENSPLAG00000001196lig49963.297ENSMOCG00000019000Lig49963.737Microtus_ochrogaster
ENSPLAG00000001196lig410086.075ENSMMOG00000004390lig410086.075Mola_mola
ENSPLAG00000001196lig49965.642ENSMODG00000025064LIG49965.889Monodelphis_domestica
ENSPLAG00000001196lig410088.106ENSMALG00000008555lig410087.665Monopterus_albus
ENSPLAG00000001196lig49964.066MGP_CAROLIEiJ_G0030809Lig49964.516Mus_caroli
ENSPLAG00000001196lig49963.626ENSMUSG00000049717Lig49964.071Mus_musculus
ENSPLAG00000001196lig49964.176MGP_PahariEiJ_G0021270Lig49964.627Mus_pahari
ENSPLAG00000001196lig49963.956MGP_SPRETEiJ_G0031917Lig49964.405Mus_spretus
ENSPLAG00000001196lig49964.835ENSMPUG00000018675LIG49964.961Mustela_putorius_furo
ENSPLAG00000001196lig49965.275ENSMLUG00000001267LIG49965.517Myotis_lucifugus
ENSPLAG00000001196lig49964.615ENSNGAG00000013258Lig49964.961Nannospalax_galili
ENSPLAG00000001196lig49987.706ENSNBRG00000021252lig410087.281Neolamprologus_brichardi
ENSPLAG00000001196lig49964.945ENSNLEG00000007888LIG49965.072Nomascus_leucogenys
ENSPLAG00000001196lig49963.407ENSOPRG00000005765LIG49963.404Ochotona_princeps
ENSPLAG00000001196lig49963.407ENSODEG00000019683LIG49963.849Octodon_degus
ENSPLAG00000001196lig49987.816ENSONIG00000011969lig49987.390Oreochromis_niloticus
ENSPLAG00000001196lig49963.956ENSOCUG00000015734LIG49964.294Oryctolagus_cuniculus
ENSPLAG00000001196lig410083.607ENSORLG00000004041lig49884.521Oryzias_latipes
ENSPLAG00000001196lig410084.044ENSORLG00020019607lig49884.967Oryzias_latipes_hni
ENSPLAG00000001196lig410083.716ENSORLG00015017754lig49884.633Oryzias_latipes_hsok
ENSPLAG00000001196lig47689.275ENSOMEG00000003459lig410089.275Oryzias_melastigma
ENSPLAG00000001196lig49964.661ENSOGAG00000032120LIG49865.406Otolemur_garnettii
ENSPLAG00000001196lig48268.683ENSOARG00000005590LIG49769.304Ovis_aries
ENSPLAG00000001196lig49965.275ENSPPAG00000032998LIG49965.517Pan_paniscus
ENSPLAG00000001196lig49865.227ENSPPRG00000017804LIG49964.961Panthera_pardus
ENSPLAG00000001196lig49865.116ENSPTIG00000010051LIG49965.184Panthera_tigris_altaica
ENSPLAG00000001196lig49965.385ENSPTRG00000006025LIG49965.628Pan_troglodytes
ENSPLAG00000001196lig49965.824ENSPANG00000007562LIG49965.740Papio_anubis
ENSPLAG00000001196lig49978.477ENSPKIG00000011645lig49778.971Paramormyrops_kingsleyae
ENSPLAG00000001196lig49968.357ENSPSIG00000001504LIG49869.016Pelodiscus_sinensis
ENSPLAG00000001196lig49881.737ENSPMGG00000013486lig410081.066Periophthalmus_magnuspinnatus
ENSPLAG00000001196lig49864.159ENSPEMG00000000076Lig49964.111Peromyscus_maniculatus_bairdii
ENSPLAG00000001196lig49964.984ENSPCIG00000021882LIG49965.333Phascolarctos_cinereus
ENSPLAG00000001196lig410099.890ENSPFOG00000000797lig410099.890Poecilia_formosa
ENSPLAG00000001196lig410099.559ENSPMEG00000021353lig410099.559Poecilia_mexicana
ENSPLAG00000001196lig410098.348ENSPREG00000007323lig410098.348Poecilia_reticulata
ENSPLAG00000001196lig49964.725ENSPPYG00000005540LIG49964.961Pongo_abelii
ENSPLAG00000001196lig49964.505ENSPVAG00000016403LIG49964.739Pteropus_vampyrus
ENSPLAG00000001196lig49987.816ENSPNYG00000009660lig410087.390Pundamilia_nyererei
ENSPLAG00000001196lig49882.405ENSPNAG00000028056lig49982.327Pygocentrus_nattereri
ENSPLAG00000001196lig49882.405ENSPNAG00000028069LIG49982.327Pygocentrus_nattereri
ENSPLAG00000001196lig49963.736ENSRNOG00000014605Lig49964.071Rattus_norvegicus
ENSPLAG00000001196lig49964.615ENSRBIG00000039962LIG49964.850Rhinopithecus_bieti
ENSPLAG00000001196lig49965.165ENSRROG00000006040LIG49965.406Rhinopithecus_roxellana
ENSPLAG00000001196lig49964.945ENSSBOG00000019029LIG49965.184Saimiri_boliviensis_boliviensis
ENSPLAG00000001196lig49963.008ENSSHAG00000009525LIG49963.778Sarcophilus_harrisii
ENSPLAG00000001196lig49979.075ENSSFOG00015012835lig49879.754Scleropages_formosus
ENSPLAG00000001196lig410083.224ENSSMAG00000011267lig410082.675Scophthalmus_maximus
ENSPLAG00000001196lig410088.087ENSSDUG00000010343lig410087.869Seriola_dumerili
ENSPLAG00000001196lig410086.557ENSSLDG00000003239lig410086.339Seriola_lalandi_dorsalis
ENSPLAG00000001196lig49964.686ENSSARG00000006573LIG49964.745Sorex_araneus
ENSPLAG00000001196lig49269.167ENSSPUG00000002444LIG410068.929Sphenodon_punctatus
ENSPLAG00000001196lig410089.474ENSSPAG00000001609lig410089.035Stegastes_partitus
ENSPLAG00000001196lig49964.686ENSSSCG00000009540LIG49965.033Sus_scrofa
ENSPLAG00000001196lig49867.333ENSTGUG00000010795LIG49967.411Taeniopygia_guttata
ENSPLAG00000001196lig410086.842ENSTRUG00000009984lig410086.294Takifugu_rubripes
ENSPLAG00000001196lig410084.101ENSTNIG00000010348lig410083.991Tetraodon_nigroviridis
ENSPLAG00000001196lig49964.835ENSTBEG00000017741LIG49965.072Tupaia_belangeri
ENSPLAG00000001196lig49963.956ENSTTRG00000012660LIG49964.071Tursiops_truncatus
ENSPLAG00000001196lig49964.396ENSUAMG00000003773LIG49964.739Ursus_americanus
ENSPLAG00000001196lig49868.263ENSXETG00000002654lig49868.263Xenopus_tropicalis
ENSPLAG00000001196lig410097.797ENSXCOG00000017401lig410097.797Xiphophorus_couchianus
ENSPLAG00000001196lig410098.018ENSXMAG00000015142lig49998.018Xiphophorus_maculatus

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