EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001227 (Gene tree)
Gene ID: 106935243
Gene Symbol: tbrg1
Alias: -
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 9955 bases
Position: chrKQ547244.1:44855-54809
Accession: 106935243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000410	HARE-HTH	PF05066.13	1.1e-15	1	1
ENSPLAP00000000411	HARE-HTH	PF05066.13	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016480	-	3589	XM_015015602	ENSPLAP00000000411	546 (aa)	XP_014871088	UPI00072DC379
ENSPLAT00000016479	-	1548	-	ENSPLAP00000000410	515 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000001227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001227's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001227	tbrg1	100	84.249	ENSAPOG00000017352	tbrg1	100	84.249	Acanthochromis_polyacanthus
ENSPLAG00000001227	tbrg1	96	80.512	ENSACIG00000021274	tbrg1	94	81.299	Amphilophus_citrinellus
ENSPLAG00000001227	tbrg1	100	83.883	ENSAOCG00000018605	tbrg1	100	83.883	Amphiprion_ocellaris
ENSPLAG00000001227	tbrg1	100	83.883	ENSAPEG00000022443	tbrg1	100	83.883	Amphiprion_percula
ENSPLAG00000001227	tbrg1	100	83.971	ENSATEG00000023537	tbrg1	100	83.971	Anabas_testudineus
ENSPLAG00000001227	tbrg1	100	82.696	ENSACLG00000000281	tbrg1	100	82.696	Astatotilapia_calliptera
ENSPLAG00000001227	tbrg1	94	71.862	ENSAMXG00000008381	tbrg1	91	71.627	Astyanax_mexicanus
ENSPLAG00000001227	tbrg1	100	80.727	ENSCSEG00000002445	tbrg1	100	79.964	Cynoglossus_semilaevis
ENSPLAG00000001227	tbrg1	100	91.026	ENSCVAG00000019626	tbrg1	100	89.927	Cyprinodon_variegatus
ENSPLAG00000001227	tbrg1	98	69.274	ENSDARG00000074996	tbrg1	93	71.401	Danio_rerio
ENSPLAG00000001227	tbrg1	93	49.098	ENSEBUG00000014060	tbrg1	89	49.471	Eptatretus_burgeri
ENSPLAG00000001227	tbrg1	99	75.763	ENSELUG00000017458	tbrg1	99	74.457	Esox_lucius
ENSPLAG00000001227	tbrg1	92	84.444	ENSFHEG00000004283	tbrg1	92	86.004	Fundulus_heteroclitus
ENSPLAG00000001227	tbrg1	100	97.802	ENSGAFG00000000204	tbrg1	100	97.802	Gambusia_affinis
ENSPLAG00000001227	tbrg1	100	82.696	ENSHBUG00000004935	tbrg1	100	82.696	Haplochromis_burtoni
ENSPLAG00000001227	tbrg1	100	72.924	ENSHCOG00000010588	tbrg1	100	72.563	Hippocampus_comes
ENSPLAG00000001227	tbrg1	94	71.285	ENSIPUG00000008697	tbrg1	93	70.940	Ictalurus_punctatus
ENSPLAG00000001227	tbrg1	100	83.607	ENSKMAG00000002775	tbrg1	100	84.153	Kryptolebias_marmoratus
ENSPLAG00000001227	tbrg1	99	82.084	ENSLBEG00000017559	tbrg1	94	83.104	Labrus_bergylta
ENSPLAG00000001227	tbrg1	100	69.805	ENSLOCG00000003093	tbrg1	93	72.849	Lepisosteus_oculatus
ENSPLAG00000001227	tbrg1	100	83.242	ENSMAMG00000000876	tbrg1	100	83.242	Mastacembelus_armatus
ENSPLAG00000001227	tbrg1	100	82.696	ENSMZEG00005013545	tbrg1	92	82.696	Maylandia_zebra
ENSPLAG00000001227	tbrg1	97	78.501	ENSMMOG00000005314	tbrg1	92	79.020	Mola_mola
ENSPLAG00000001227	tbrg1	96	83.832	ENSMALG00000011630	tbrg1	99	84.180	Monopterus_albus
ENSPLAG00000001227	tbrg1	99	81.034	ENSNBRG00000017490	tbrg1	100	81.818	Neolamprologus_brichardi
ENSPLAG00000001227	tbrg1	100	83.060	ENSONIG00000005284	tbrg1	100	83.060	Oreochromis_niloticus
ENSPLAG00000001227	tbrg1	100	79.599	ENSORLG00000014519	tbrg1	100	78.324	Oryzias_latipes
ENSPLAG00000001227	tbrg1	100	78.689	ENSORLG00020009567	tbrg1	100	77.413	Oryzias_latipes_hni
ENSPLAG00000001227	tbrg1	100	79.599	ENSORLG00015000448	tbrg1	100	78.324	Oryzias_latipes_hsok
ENSPLAG00000001227	tbrg1	100	80.328	ENSOMEG00000006130	tbrg1	100	79.417	Oryzias_melastigma
ENSPLAG00000001227	tbrg1	97	72.039	ENSPKIG00000012274	tbrg1	89	71.619	Paramormyrops_kingsleyae
ENSPLAG00000001227	tbrg1	100	75.676	ENSPMGG00000015968	tbrg1	100	75.451	Periophthalmus_magnuspinnatus
ENSPLAG00000001227	tbrg1	100	99.267	ENSPFOG00000004279	tbrg1	100	99.267	Poecilia_formosa
ENSPLAG00000001227	tbrg1	100	99.084	ENSPMEG00000000955	tbrg1	100	99.084	Poecilia_mexicana
ENSPLAG00000001227	tbrg1	100	97.619	ENSPREG00000005246	tbrg1	100	97.619	Poecilia_reticulata
ENSPLAG00000001227	tbrg1	88	81.913	ENSPNYG00000012625	tbrg1	100	81.913	Pundamilia_nyererei
ENSPLAG00000001227	tbrg1	97	70.117	ENSPNAG00000028332	tbrg1	96	70.325	Pygocentrus_nattereri
ENSPLAG00000001227	tbrg1	94	74.052	ENSSFOG00015009308	tbrg1	86	74.125	Scleropages_formosus
ENSPLAG00000001227	tbrg1	100	80.586	ENSSMAG00000002529	tbrg1	100	80.586	Scophthalmus_maximus
ENSPLAG00000001227	tbrg1	99	85.740	ENSSDUG00000013674	tbrg1	99	85.740	Seriola_dumerili
ENSPLAG00000001227	tbrg1	97	84.302	ENSSLDG00000008932	tbrg1	98	84.884	Seriola_lalandi_dorsalis
ENSPLAG00000001227	tbrg1	86	83.974	ENSSPAG00000004808	tbrg1	99	83.974	Stegastes_partitus
ENSPLAG00000001227	tbrg1	97	76.908	ENSTRUG00000005960	tbrg1	98	77.735	Takifugu_rubripes
ENSPLAG00000001227	tbrg1	100	97.619	ENSXMAG00000001551	tbrg1	100	97.619	Xiphophorus_maculatus