EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001255 (Gene tree)
Gene ID: 106953801
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 2381 bases
Position: chrKQ545918.1:254135-256515
Accession: 106953801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000435	MRP-S32	PF10210.9	1.5e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016444	-	831	XM_015042839	ENSPLAP00000000435	145 (aa)	XP_014898325	UPI00072EA4EA

Gene Model

Click here to download ENSPLAG00000001255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001255's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001255	mrpl42	100	76.027	ENSAPOG00000010677	mrpl42	100	76.027	Acanthochromis_polyacanthus
ENSPLAG00000001255	mrpl42	100	76.552	ENSAOCG00000011620	mrpl42	100	76.552	Amphiprion_ocellaris
ENSPLAG00000001255	mrpl42	100	76.552	ENSAPEG00000019516	mrpl42	100	76.552	Amphiprion_percula
ENSPLAG00000001255	mrpl42	90	74.809	ENSATEG00000014106	mrpl42	100	74.809	Anabas_testudineus
ENSPLAG00000001255	mrpl42	75	64.220	ENSACAG00000012606	MRPL42	75	64.220	Anolis_carolinensis
ENSPLAG00000001255	mrpl42	100	73.103	ENSACLG00000026856	mrpl42	100	73.103	Astatotilapia_calliptera
ENSPLAG00000001255	mrpl42	71	53.398	ENSAMXG00000035149	mrpl42	75	53.398	Astyanax_mexicanus
ENSPLAG00000001255	mrpl42	99	62.937	ENSCSEG00000010067	mrpl42	98	62.937	Cynoglossus_semilaevis
ENSPLAG00000001255	mrpl42	100	86.207	ENSCVAG00000002612	mrpl42	100	86.207	Cyprinodon_variegatus
ENSPLAG00000001255	mrpl42	100	55.172	ENSDARG00000079391	mrpl42	100	55.172	Danio_rerio
ENSPLAG00000001255	mrpl42	79	46.667	ENSEBUG00000005581	mrpl42	89	46.667	Eptatretus_burgeri
ENSPLAG00000001255	mrpl42	99	61.806	ENSELUG00000001973	mrpl42	99	61.806	Esox_lucius
ENSPLAG00000001255	mrpl42	100	81.379	ENSFHEG00000018696	mrpl42	100	81.379	Fundulus_heteroclitus
ENSPLAG00000001255	mrpl42	67	83.505	ENSGMOG00000002972	mrpl42	100	83.505	Gadus_morhua
ENSPLAG00000001255	mrpl42	100	95.862	ENSGAFG00000018373	mrpl42	100	95.862	Gambusia_affinis
ENSPLAG00000001255	mrpl42	66	83.333	ENSGACG00000018811	mrpl42	99	83.333	Gasterosteus_aculeatus
ENSPLAG00000001255	mrpl42	100	73.103	ENSHBUG00000015960	mrpl42	100	73.103	Haplochromis_burtoni
ENSPLAG00000001255	mrpl42	100	63.946	ENSHCOG00000014046	mrpl42	100	63.946	Hippocampus_comes
ENSPLAG00000001255	mrpl42	68	60.606	ENSIPUG00000015395	mrpl42	67	60.606	Ictalurus_punctatus
ENSPLAG00000001255	mrpl42	100	74.483	ENSKMAG00000013671	mrpl42	100	74.483	Kryptolebias_marmoratus
ENSPLAG00000001255	mrpl42	100	69.655	ENSLBEG00000028618	mrpl42	99	69.655	Labrus_bergylta
ENSPLAG00000001255	mrpl42	50	68.056	ENSLOCG00000015284	mrpl42	57	68.056	Lepisosteus_oculatus
ENSPLAG00000001255	mrpl42	100	78.621	ENSMAMG00000009737	mrpl42	100	78.621	Mastacembelus_armatus
ENSPLAG00000001255	mrpl42	100	73.103	ENSMZEG00005008545	mrpl42	96	73.103	Maylandia_zebra
ENSPLAG00000001255	mrpl42	83	63.636	ENSMMOG00000002317	mrpl42	80	63.636	Mola_mola
ENSPLAG00000001255	mrpl42	100	65.161	ENSMALG00000015794	mrpl42	96	65.161	Monopterus_albus
ENSPLAG00000001255	mrpl42	100	73.103	ENSNBRG00000003307	mrpl42	100	73.103	Neolamprologus_brichardi
ENSPLAG00000001255	mrpl42	100	73.103	ENSONIG00000011753	mrpl42	100	73.103	Oreochromis_niloticus
ENSPLAG00000001255	mrpl42	93	50.725	ENSOANG00000019984	-	88	50.725	Ornithorhynchus_anatinus
ENSPLAG00000001255	mrpl42	100	67.123	ENSORLG00000013500	mrpl42	85	67.123	Oryzias_latipes
ENSPLAG00000001255	mrpl42	100	70.548	ENSORLG00020000548	mrpl42	100	70.548	Oryzias_latipes_hni
ENSPLAG00000001255	mrpl42	100	66.207	ENSORLG00015016984	mrpl42	100	66.207	Oryzias_latipes_hsok
ENSPLAG00000001255	mrpl42	100	71.034	ENSOMEG00000010700	mrpl42	100	71.034	Oryzias_melastigma
ENSPLAG00000001255	mrpl42	100	61.905	ENSPKIG00000025457	mrpl42	100	61.905	Paramormyrops_kingsleyae
ENSPLAG00000001255	mrpl42	90	60.305	ENSPMGG00000019705	mrpl42	93	60.305	Periophthalmus_magnuspinnatus
ENSPLAG00000001255	mrpl42	90	48.872	ENSPMAG00000008091	mrpl42	82	48.872	Petromyzon_marinus
ENSPLAG00000001255	mrpl42	100	98.621	ENSPFOG00000016539	mrpl42	99	98.621	Poecilia_formosa
ENSPLAG00000001255	mrpl42	100	97.931	ENSPMEG00000016462	mrpl42	100	97.931	Poecilia_mexicana
ENSPLAG00000001255	mrpl42	81	92.373	ENSPREG00000012053	mrpl42	86	92.373	Poecilia_reticulata
ENSPLAG00000001255	mrpl42	100	73.103	ENSPNYG00000009586	mrpl42	100	73.103	Pundamilia_nyererei
ENSPLAG00000001255	mrpl42	69	61.000	ENSPNAG00000020753	mrpl42	69	61.000	Pygocentrus_nattereri
ENSPLAG00000001255	mrpl42	100	71.724	ENSSMAG00000000262	mrpl42	100	71.724	Scophthalmus_maximus
ENSPLAG00000001255	mrpl42	100	75.862	ENSSDUG00000005949	mrpl42	100	75.862	Seriola_dumerili
ENSPLAG00000001255	mrpl42	100	74.483	ENSSLDG00000010159	mrpl42	100	74.483	Seriola_lalandi_dorsalis
ENSPLAG00000001255	mrpl42	100	66.897	ENSTRUG00000025949	mrpl42	99	66.897	Takifugu_rubripes
ENSPLAG00000001255	mrpl42	79	57.391	ENSXETG00000032902	mrpl42	92	57.391	Xenopus_tropicalis
ENSPLAG00000001255	mrpl42	100	80.952	ENSXCOG00000013875	mrpl42	98	80.952	Xiphophorus_couchianus