EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000001418 (Gene tree)
Gene ID: 106951302
Gene Symbol: -
Alias: -
Full Name: trinucleotide repeat-containing gene 6B protein-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 20629 bases
Position: chrKQ545766.1:65846-86474
Accession: 106951302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019357	Ago_hook	PF10427.9	5.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016220	-	5475	-	ENSPLAP00000019357	1824 (aa)	-	-
ENSPLAT00000016212	-	7747	XM_015038748	ENSPLAP00000019365	1880 (aa)	XP_014894234	UPI00072E108B
ENSPLAT00000016206	-	7867	XM_015038747	ENSPLAP00000000581	1920 (aa)	XP_014894233	UPI00072E4EF5

Gene Model

Click here to download ENSPLAG00000001418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000001418	-	52	33.825	ENSPLAG00000021055	tnrc6c1	54	36.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001418	-	99	37.209	ENSG00000100354	TNRC6B	87	69.863	Homo_sapiens
ENSPLAG00000001418	-	76	49.362	ENSAMEG00000011025	TNRC6B	66	45.231	Ailuropoda_melanoleuca
ENSPLAG00000001418	-	98	45.744	ENSAPLG00000009347	TNRC6B	68	45.587	Anas_platyrhynchos
ENSPLAG00000001418	-	85	51.923	ENSACAG00000007281	TNRC6B	55	68.056	Anolis_carolinensis
ENSPLAG00000001418	-	98	39.124	ENSANAG00000035042	TNRC6B	87	69.863	Aotus_nancymaae
ENSPLAG00000001418	-	99	52.146	ENSAMXG00000008707	tnrc6b	97	53.377	Astyanax_mexicanus
ENSPLAG00000001418	-	87	46.919	ENSBTAG00000021076	TNRC6B	67	44.623	Bos_taurus
ENSPLAG00000001418	-	92	49.218	ENSCJAG00000002732	TNRC6B	87	69.863	Callithrix_jacchus
ENSPLAG00000001418	-	89	47.192	ENSCAFG00000001255	TNRC6B	67	45.061	Canis_familiaris
ENSPLAG00000001418	-	88	44.420	ENSCAFG00020002189	TNRC6B	64	43.392	Canis_lupus_dingo
ENSPLAG00000001418	-	93	47.945	ENSTSYG00000011836	TNRC6B	87	69.863	Carlito_syrichta
ENSPLAG00000001418	-	98	38.700	ENSCCAG00000019912	TNRC6B	86	69.863	Cebus_capucinus
ENSPLAG00000001418	-	76	48.222	ENSCATG00000029291	TNRC6B	86	69.863	Cercocebus_atys
ENSPLAG00000001418	-	93	44.677	ENSCSAG00000006021	TNRC6B	66	43.396	Chlorocebus_sabaeus
ENSPLAG00000001418	-	89	38.386	ENSCPBG00000022932	TNRC6B	66	46.681	Chrysemys_picta_bellii
ENSPLAG00000001418	-	89	46.861	ENSCANG00000030776	TNRC6B	87	69.863	Colobus_angolensis_palliatus
ENSPLAG00000001418	-	98	39.711	ENSDNOG00000012744	TNRC6B	66	44.939	Dasypus_novemcinctus
ENSPLAG00000001418	-	88	38.720	ENSETEG00000006570	TNRC6B	51	64.384	Echinops_telfairi
ENSPLAG00000001418	-	87	47.078	ENSEASG00005005306	TNRC6B	64	46.095	Equus_asinus_asinus
ENSPLAG00000001418	-	92	46.275	ENSECAG00000009759	TNRC6B	65	45.065	Equus_caballus
ENSPLAG00000001418	-	78	48.939	ENSFCAG00000004791	TNRC6B	67	44.779	Felis_catus
ENSPLAG00000001418	-	52	48.156	ENSFALG00000012195	TNRC6B	54	47.714	Ficedula_albicollis
ENSPLAG00000001418	-	99	39.838	ENSGALG00000012050	TNRC6B	64	45.817	Gallus_gallus
ENSPLAG00000001418	-	98	39.207	ENSGGOG00000008444	TNRC6B	87	69.863	Gorilla_gorilla
ENSPLAG00000001418	-	98	38.895	ENSHGLG00000009306	TNRC6B	68	44.340	Heterocephalus_glaber_female
ENSPLAG00000001418	-	97	52.308	ENSIPUG00000001515	tnrc6b	96	53.350	Ictalurus_punctatus
ENSPLAG00000001418	-	83	41.389	ENSLACG00000000628	-	67	42.321	Latimeria_chalumnae
ENSPLAG00000001418	-	53	49.116	ENSLAFG00000014473	TNRC6B	99	47.782	Loxodonta_africana
ENSPLAG00000001418	-	76	48.080	ENSMFAG00000003862	TNRC6B	86	69.863	Macaca_fascicularis
ENSPLAG00000001418	-	89	46.861	ENSMMUG00000021345	TNRC6B	87	69.863	Macaca_mulatta
ENSPLAG00000001418	-	89	46.861	ENSMLEG00000041780	TNRC6B	87	69.863	Mandrillus_leucophaeus
ENSPLAG00000001418	-	99	38.515	ENSMGAG00000012333	TNRC6B	68	46.089	Meleagris_gallopavo
ENSPLAG00000001418	-	98	50.071	ENSMICG00000014056	TNRC6B	87	69.863	Microcebus_murinus
ENSPLAG00000001418	-	50	93.548	ENSMMOG00000002799	si:dkey-217f16.6	67	94.286	Mola_mola
ENSPLAG00000001418	-	50	49.644	MGP_SPRETEiJ_G0020941	Tnrc6b	66	44.739	Mus_spretus
ENSPLAG00000001418	-	99	48.791	ENSMLUG00000008765	TNRC6B	67	45.024	Myotis_lucifugus
ENSPLAG00000001418	-	51	72.727	ENSNLEG00000015311	TNRC6B	87	69.863	Nomascus_leucogenys
ENSPLAG00000001418	-	78	49.704	ENSOPRG00000012054	TNRC6B	56	53.205	Ochotona_princeps
ENSPLAG00000001418	-	98	48.933	ENSOGAG00000011096	TNRC6B	67	44.476	Otolemur_garnettii
ENSPLAG00000001418	-	98	39.247	ENSPPAG00000028514	TNRC6B	87	69.863	Pan_paniscus
ENSPLAG00000001418	-	89	46.970	ENSPPRG00000017741	TNRC6B	88	61.111	Panthera_pardus
ENSPLAG00000001418	-	79	46.781	ENSPTIG00000022064	TNRC6B	78	61.111	Panthera_tigris_altaica
ENSPLAG00000001418	-	98	39.115	ENSPTRG00000047826	TNRC6B	87	69.863	Pan_troglodytes
ENSPLAG00000001418	-	87	42.208	ENSPANG00000009271	TNRC6B	86	69.863	Papio_anubis
ENSPLAG00000001418	-	53	48.652	ENSPCIG00000020347	TNRC6B	67	44.392	Phascolarctos_cinereus
ENSPLAG00000001418	-	97	80.705	ENSPFOG00000006033	-	67	90.074	Poecilia_formosa
ENSPLAG00000001418	-	87	84.471	ENSPMEG00000006371	-	95	84.272	Poecilia_mexicana
ENSPLAG00000001418	-	100	37.292	ENSPPYG00000011849	TNRC6B	64	45.985	Pongo_abelii
ENSPLAG00000001418	-	71	43.468	ENSPCAG00000008739	TNRC6B	61	43.885	Procavia_capensis
ENSPLAG00000001418	-	98	50.071	ENSPCOG00000020790	TNRC6B	87	69.863	Propithecus_coquereli
ENSPLAG00000001418	-	67	50.349	ENSPVAG00000004975	TNRC6B	58	47.153	Pteropus_vampyrus
ENSPLAG00000001418	-	99	51.192	ENSPNAG00000011713	tnrc6b	96	52.213	Pygocentrus_nattereri
ENSPLAG00000001418	-	79	46.861	ENSRBIG00000035576	TNRC6B	88	69.863	Rhinopithecus_bieti
ENSPLAG00000001418	-	79	46.861	ENSRROG00000031135	TNRC6B	87	69.863	Rhinopithecus_roxellana
ENSPLAG00000001418	-	51	72.727	ENSSBOG00000029743	TNRC6B	89	69.863	Saimiri_boliviensis_boliviensis
ENSPLAG00000001418	-	92	53.464	ENSSHAG00000009692	TNRC6B	67	44.824	Sarcophilus_harrisii
ENSPLAG00000001418	-	98	49.360	ENSSSCG00000000078	TNRC6B	65	45.369	Sus_scrofa
ENSPLAG00000001418	-	87	44.577	ENSTTRG00000011465	TNRC6B	62	43.660	Tursiops_truncatus
ENSPLAG00000001418	-	87	47.243	ENSUAMG00000007174	TNRC6B	64	46.264	Ursus_americanus
ENSPLAG00000001418	-	55	41.583	ENSVPAG00000001467	TNRC6B	60	40.955	Vicugna_pacos
ENSPLAG00000001418	-	98	38.549	ENSVVUG00000007064	TNRC6B	66	45.146	Vulpes_vulpes
ENSPLAG00000001418	-	86	90.829	ENSXCOG00000003042	-	98	90.389	Xiphophorus_couchianus