EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001446 (Gene tree)
Gene ID: 106961308
Gene Symbol: smg7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 25871 bases
Position: chrKQ546602.1:206404-232274
Accession: 106961308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000598	EST1	PF10374.9	2.1e-24	1	1
ENSPLAP00000000598	EST1_DNA_bind	PF10373.9	2.2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000016167	-	5737	XM_015054944	ENSPLAP00000000598	1137 (aa)	XP_014910430	UPI00072D9E95

Gene Model

Click here to download ENSPLAG00000001446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001446	smg7	99	64.513	ENSG00000116698	SMG7	86	91.824	Homo_sapiens
ENSPLAG00000001446	smg7	89	87.221	ENSAPOG00000009611	smg7	96	87.221	Acanthochromis_polyacanthus
ENSPLAG00000001446	smg7	99	63.644	ENSAMEG00000002357	SMG7	99	63.731	Ailuropoda_melanoleuca
ENSPLAG00000001446	smg7	97	79.802	ENSACIG00000015152	smg7	100	80.450	Amphilophus_citrinellus
ENSPLAG00000001446	smg7	100	84.809	ENSAOCG00000013538	smg7	100	85.690	Amphiprion_ocellaris
ENSPLAG00000001446	smg7	100	84.822	ENSAPEG00000007851	smg7	100	85.702	Amphiprion_percula
ENSPLAG00000001446	smg7	100	83.983	ENSATEG00000006931	smg7	100	84.069	Anabas_testudineus
ENSPLAG00000001446	smg7	99	63.730	ENSAPLG00000015811	SMG7	99	63.433	Anas_platyrhynchos
ENSPLAG00000001446	smg7	99	61.500	ENSACAG00000014989	SMG7	99	61.020	Anolis_carolinensis
ENSPLAG00000001446	smg7	99	64.488	ENSANAG00000028114	SMG7	85	90.446	Aotus_nancymaae
ENSPLAG00000001446	smg7	100	82.537	ENSACLG00000022079	smg7	100	82.158	Astatotilapia_calliptera
ENSPLAG00000001446	smg7	100	74.042	ENSAMXG00000020809	smg7	100	74.129	Astyanax_mexicanus
ENSPLAG00000001446	smg7	99	64.610	ENSBTAG00000008003	SMG7	99	64.524	Bos_taurus
ENSPLAG00000001446	smg7	99	64.402	ENSCJAG00000005135	SMG7	86	90.446	Callithrix_jacchus
ENSPLAG00000001446	smg7	99	59.801	ENSCAFG00000013276	SMG7	97	59.884	Canis_familiaris
ENSPLAG00000001446	smg7	99	63.582	ENSCAFG00020015475	SMG7	89	87.805	Canis_lupus_dingo
ENSPLAG00000001446	smg7	100	60.611	ENSCHIG00000018192	SMG7	99	60.776	Capra_hircus
ENSPLAG00000001446	smg7	99	64.397	ENSTSYG00000002667	SMG7	80	91.613	Carlito_syrichta
ENSPLAG00000001446	smg7	99	60.083	ENSCPOG00000008906	SMG7	99	59.718	Cavia_porcellus
ENSPLAG00000001446	smg7	99	64.660	ENSCCAG00000028596	SMG7	85	90.446	Cebus_capucinus
ENSPLAG00000001446	smg7	99	64.772	ENSCATG00000011063	SMG7	85	90.446	Cercocebus_atys
ENSPLAG00000001446	smg7	99	64.397	ENSCLAG00000010751	SMG7	99	64.655	Chinchilla_lanigera
ENSPLAG00000001446	smg7	99	60.797	ENSCSAG00000012654	SMG7	97	60.963	Chlorocebus_sabaeus
ENSPLAG00000001446	smg7	92	56.334	ENSCHOG00000010522	SMG7	93	56.541	Choloepus_hoffmanni
ENSPLAG00000001446	smg7	99	65.520	ENSCPBG00000015724	SMG7	99	65.146	Chrysemys_picta_bellii
ENSPLAG00000001446	smg7	99	64.650	ENSCANG00000015680	SMG7	85	90.446	Colobus_angolensis_palliatus
ENSPLAG00000001446	smg7	99	63.894	ENSCGRG00001013705	Smg7	99	64.065	Cricetulus_griseus_chok1gshd
ENSPLAG00000001446	smg7	99	63.738	ENSCGRG00000018401	Smg7	100	63.910	Cricetulus_griseus_crigri
ENSPLAG00000001446	smg7	99	88.604	ENSCVAG00000011842	smg7	100	88.693	Cyprinodon_variegatus
ENSPLAG00000001446	smg7	100	73.565	ENSDARG00000060767	smg7	100	74.132	Danio_rerio
ENSPLAG00000001446	smg7	99	60.963	ENSDORG00000007331	Smg7	99	61.379	Dipodomys_ordii
ENSPLAG00000001446	smg7	96	59.983	ENSETEG00000002654	SMG7	99	60.411	Echinops_telfairi
ENSPLAG00000001446	smg7	99	61.116	ENSEASG00005006524	SMG7	99	61.199	Equus_asinus_asinus
ENSPLAG00000001446	smg7	93	85.970	ENSECAG00000004313	SMG7	97	85.757	Equus_caballus
ENSPLAG00000001446	smg7	96	59.399	ENSEEUG00000002024	SMG7	94	59.399	Erinaceus_europaeus
ENSPLAG00000001446	smg7	100	71.263	ENSELUG00000010293	smg7	99	73.605	Esox_lucius
ENSPLAG00000001446	smg7	99	62.285	ENSFCAG00000010900	SMG7	99	62.045	Felis_catus
ENSPLAG00000001446	smg7	99	59.916	ENSFALG00000003047	SMG7	100	60.840	Ficedula_albicollis
ENSPLAG00000001446	smg7	99	60.967	ENSFDAG00000012121	SMG7	99	60.489	Fukomys_damarensis
ENSPLAG00000001446	smg7	100	89.667	ENSFHEG00000011073	smg7	100	89.667	Fundulus_heteroclitus
ENSPLAG00000001446	smg7	83	79.323	ENSGMOG00000004916	smg7	91	79.323	Gadus_morhua
ENSPLAG00000001446	smg7	99	64.024	ENSGALG00000004667	SMG7	99	64.065	Gallus_gallus
ENSPLAG00000001446	smg7	100	97.805	ENSGAFG00000019000	smg7	100	97.805	Gambusia_affinis
ENSPLAG00000001446	smg7	98	79.393	ENSGACG00000001634	smg7	99	79.821	Gasterosteus_aculeatus
ENSPLAG00000001446	smg7	99	64.513	ENSGGOG00000002342	SMG7	82	89.375	Gorilla_gorilla
ENSPLAG00000001446	smg7	98	81.239	ENSHBUG00000003726	smg7	99	81.050	Haplochromis_burtoni
ENSPLAG00000001446	smg7	99	64.858	ENSHGLG00000009353	SMG7	99	65.030	Heterocephalus_glaber_female
ENSPLAG00000001446	smg7	99	64.772	ENSHGLG00100009637	-	99	64.944	Heterocephalus_glaber_male
ENSPLAG00000001446	smg7	99	55.657	ENSHGLG00100004878	-	99	55.454	Heterocephalus_glaber_male
ENSPLAG00000001446	smg7	100	73.951	ENSIPUG00000016997	smg7	100	73.864	Ictalurus_punctatus
ENSPLAG00000001446	smg7	99	63.117	ENSSTOG00000000401	SMG7	99	63.290	Ictidomys_tridecemlineatus
ENSPLAG00000001446	smg7	99	60.862	ENSJJAG00000012351	Smg7	99	61.028	Jaculus_jaculus
ENSPLAG00000001446	smg7	97	81.794	ENSKMAG00000004900	smg7	100	81.794	Kryptolebias_marmoratus
ENSPLAG00000001446	smg7	64	62.466	ENSLBEG00000005220	-	75	73.702	Labrus_bergylta
ENSPLAG00000001446	smg7	99	81.485	ENSLBEG00000002983	smg7	99	82.183	Labrus_bergylta
ENSPLAG00000001446	smg7	100	65.564	ENSLACG00000000972	SMG7	99	65.670	Latimeria_chalumnae
ENSPLAG00000001446	smg7	99	65.653	ENSLOCG00000002010	smg7	99	65.571	Lepisosteus_oculatus
ENSPLAG00000001446	smg7	99	60.667	ENSLAFG00000008186	SMG7	99	60.652	Loxodonta_africana
ENSPLAG00000001446	smg7	99	63.040	ENSMFAG00000031653	SMG7	85	90.446	Macaca_fascicularis
ENSPLAG00000001446	smg7	99	63.817	ENSMMUG00000018458	SMG7	99	63.990	Macaca_mulatta
ENSPLAG00000001446	smg7	99	64.772	ENSMNEG00000034798	SMG7	85	90.446	Macaca_nemestrina
ENSPLAG00000001446	smg7	99	64.772	ENSMLEG00000037170	SMG7	99	64.944	Mandrillus_leucophaeus
ENSPLAG00000001446	smg7	88	81.108	ENSMAMG00000018733	smg7	85	81.683	Mastacembelus_armatus
ENSPLAG00000001446	smg7	100	82.798	ENSMZEG00005015247	smg7	100	81.472	Maylandia_zebra
ENSPLAG00000001446	smg7	99	63.433	ENSMGAG00000001561	SMG7	99	63.385	Meleagris_gallopavo
ENSPLAG00000001446	smg7	99	64.010	ENSMAUG00000019484	Smg7	99	64.096	Mesocricetus_auratus
ENSPLAG00000001446	smg7	99	64.513	ENSMICG00000007145	SMG7	81	91.613	Microcebus_murinus
ENSPLAG00000001446	smg7	99	63.846	ENSMOCG00000020748	Smg7	99	63.753	Microtus_ochrogaster
ENSPLAG00000001446	smg7	99	79.720	ENSMMOG00000001524	smg7	99	80.332	Mola_mola
ENSPLAG00000001446	smg7	92	64.432	ENSMODG00000007139	SMG7	99	64.804	Monodelphis_domestica
ENSPLAG00000001446	smg7	100	83.261	ENSMALG00000000061	smg7	93	83.609	Monopterus_albus
ENSPLAG00000001446	smg7	99	64.261	MGP_CAROLIEiJ_G0014704	Smg7	99	64.089	Mus_caroli
ENSPLAG00000001446	smg7	99	64.003	ENSMUSG00000042772	Smg7	99	64.089	Mus_musculus
ENSPLAG00000001446	smg7	99	64.175	MGP_PahariEiJ_G0027940	Smg7	99	64.261	Mus_pahari
ENSPLAG00000001446	smg7	99	64.089	MGP_SPRETEiJ_G0015511	Smg7	99	64.175	Mus_spretus
ENSPLAG00000001446	smg7	98	59.730	ENSMPUG00000011732	SMG7	97	59.815	Mustela_putorius_furo
ENSPLAG00000001446	smg7	99	60.432	ENSMLUG00000015417	SMG7	99	60.515	Myotis_lucifugus
ENSPLAG00000001446	smg7	100	63.652	ENSNGAG00000009836	Smg7	100	63.225	Nannospalax_galili
ENSPLAG00000001446	smg7	98	76.190	ENSNBRG00000024343	smg7	99	75.750	Neolamprologus_brichardi
ENSPLAG00000001446	smg7	99	64.686	ENSNLEG00000018018	SMG7	99	64.858	Nomascus_leucogenys
ENSPLAG00000001446	smg7	70	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSPLAG00000001446	smg7	96	57.180	ENSOPRG00000013942	SMG7	96	57.615	Ochotona_princeps
ENSPLAG00000001446	smg7	99	64.267	ENSODEG00000010390	SMG7	99	64.610	Octodon_degus
ENSPLAG00000001446	smg7	100	82.711	ENSONIG00000000277	smg7	100	82.681	Oreochromis_niloticus
ENSPLAG00000001446	smg7	99	60.168	ENSOANG00000000994	SMG7	100	59.916	Ornithorhynchus_anatinus
ENSPLAG00000001446	smg7	99	59.102	ENSOCUG00000005887	SMG7	93	58.940	Oryctolagus_cuniculus
ENSPLAG00000001446	smg7	100	79.316	ENSORLG00000007314	smg7	100	79.842	Oryzias_latipes
ENSPLAG00000001446	smg7	100	79.404	ENSORLG00020015779	smg7	100	79.930	Oryzias_latipes_hni
ENSPLAG00000001446	smg7	100	79.842	ENSORLG00015012289	smg7	100	79.842	Oryzias_latipes_hsok
ENSPLAG00000001446	smg7	100	77.227	ENSOMEG00000002328	smg7	100	76.891	Oryzias_melastigma
ENSPLAG00000001446	smg7	96	59.199	ENSOGAG00000003107	SMG7	93	59.332	Otolemur_garnettii
ENSPLAG00000001446	smg7	99	63.066	ENSOARG00000001352	SMG7	100	63.240	Ovis_aries
ENSPLAG00000001446	smg7	99	64.686	ENSPPAG00000031619	SMG7	90	87.273	Pan_paniscus
ENSPLAG00000001446	smg7	99	64.010	ENSPPRG00000011222	SMG7	99	64.182	Panthera_pardus
ENSPLAG00000001446	smg7	96	60.629	ENSPTIG00000007242	SMG7	100	60.799	Panthera_tigris_altaica
ENSPLAG00000001446	smg7	99	64.686	ENSPTRG00000001764	SMG7	85	90.446	Pan_troglodytes
ENSPLAG00000001446	smg7	99	64.772	ENSPANG00000004520	SMG7	99	64.944	Papio_anubis
ENSPLAG00000001446	smg7	99	67.546	ENSPKIG00000007242	smg7	99	66.871	Paramormyrops_kingsleyae
ENSPLAG00000001446	smg7	99	65.191	ENSPSIG00000012201	SMG7	100	64.870	Pelodiscus_sinensis
ENSPLAG00000001446	smg7	71	48.333	ENSPMGG00000021833	smg7	97	48.568	Periophthalmus_magnuspinnatus
ENSPLAG00000001446	smg7	99	63.526	ENSPEMG00000011315	Smg7	99	63.613	Peromyscus_maniculatus_bairdii
ENSPLAG00000001446	smg7	99	64.666	ENSPCIG00000003786	SMG7	89	91.250	Phascolarctos_cinereus
ENSPLAG00000001446	smg7	100	95.535	ENSPFOG00000019219	smg7	100	95.535	Poecilia_formosa
ENSPLAG00000001446	smg7	97	99.727	ENSPMEG00000005218	smg7	99	99.727	Poecilia_mexicana
ENSPLAG00000001446	smg7	87	93.542	ENSPREG00000019039	smg7	91	93.037	Poecilia_reticulata
ENSPLAG00000001446	smg7	99	64.686	ENSPPYG00000000427	SMG7	99	64.858	Pongo_abelii
ENSPLAG00000001446	smg7	83	69.651	ENSPCAG00000008360	SMG7	86	69.651	Procavia_capensis
ENSPLAG00000001446	smg7	99	63.203	ENSPCOG00000011996	SMG7	76	91.613	Propithecus_coquereli
ENSPLAG00000001446	smg7	91	56.897	ENSPVAG00000000851	SMG7	89	57.169	Pteropus_vampyrus
ENSPLAG00000001446	smg7	100	82.378	ENSPNYG00000007643	smg7	100	82.199	Pundamilia_nyererei
ENSPLAG00000001446	smg7	100	74.805	ENSPNAG00000011374	smg7	100	74.892	Pygocentrus_nattereri
ENSPLAG00000001446	smg7	99	64.206	ENSRNOG00000027962	Smg7	99	65.019	Rattus_norvegicus
ENSPLAG00000001446	smg7	99	64.686	ENSRBIG00000036316	SMG7	99	64.858	Rhinopithecus_bieti
ENSPLAG00000001446	smg7	99	64.686	ENSRROG00000035719	SMG7	99	64.858	Rhinopithecus_roxellana
ENSPLAG00000001446	smg7	99	63.094	ENSSBOG00000023454	SMG7	86	91.824	Saimiri_boliviensis_boliviensis
ENSPLAG00000001446	smg7	99	64.488	ENSSHAG00000013147	SMG7	99	64.549	Sarcophilus_harrisii
ENSPLAG00000001446	smg7	100	70.670	ENSSFOG00015017252	smg7	100	70.670	Scleropages_formosus
ENSPLAG00000001446	smg7	100	82.605	ENSSMAG00000006067	smg7	100	81.397	Scophthalmus_maximus
ENSPLAG00000001446	smg7	63	88.292	ENSSDUG00000017543	smg7	100	84.469	Seriola_dumerili
ENSPLAG00000001446	smg7	99	64.777	ENSSPUG00000002064	SMG7	99	64.316	Sphenodon_punctatus
ENSPLAG00000001446	smg7	99	81.556	ENSSPAG00000008733	smg7	99	81.818	Stegastes_partitus
ENSPLAG00000001446	smg7	99	63.377	ENSSSCG00000015558	SMG7	99	63.463	Sus_scrofa
ENSPLAG00000001446	smg7	99	62.722	ENSTGUG00000003928	SMG7	100	64.021	Taeniopygia_guttata
ENSPLAG00000001446	smg7	100	69.262	ENSTNIG00000002802	smg7	100	68.900	Tetraodon_nigroviridis
ENSPLAG00000001446	smg7	78	65.714	ENSTBEG00000003220	SMG7	72	65.714	Tupaia_belangeri
ENSPLAG00000001446	smg7	96	60.000	ENSTTRG00000014778	SMG7	94	60.086	Tursiops_truncatus
ENSPLAG00000001446	smg7	96	61.538	ENSUAMG00000017473	SMG7	100	61.628	Ursus_americanus
ENSPLAG00000001446	smg7	96	61.538	ENSUMAG00000016389	SMG7	100	61.628	Ursus_maritimus
ENSPLAG00000001446	smg7	99	62.511	ENSVVUG00000008976	SMG7	99	62.597	Vulpes_vulpes
ENSPLAG00000001446	smg7	99	59.696	ENSXETG00000012528	smg7	99	59.898	Xenopus_tropicalis
ENSPLAG00000001446	smg7	100	97.625	ENSXMAG00000007123	smg7	100	97.625	Xiphophorus_maculatus