EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001614 (Gene tree)
Gene ID: 106955284
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 10096 bases
Position: chrKQ546038.1:363293-373388
Accession: 106955284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000733	RRM_1	PF00076.22	4.8e-11	1	1
ENSPLAP00000000733	SAP	PF02037.27	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015951	-	3294	XM_015045387	ENSPLAP00000000733	789 (aa)	XP_014900873	UPI0004440FC8

Gene Model

Click here to download ENSPLAG00000001614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001614's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001614	safb	95	40.185	ENSG00000160633	SAFB	76	61.719	Homo_sapiens
ENSPLAG00000001614	safb	100	66.323	ENSAPOG00000022508	safb	100	65.747	Acanthochromis_polyacanthus
ENSPLAG00000001614	safb	68	39.452	ENSAMEG00000012254	SAFB	97	38.798	Ailuropoda_melanoleuca
ENSPLAG00000001614	safb	100	64.784	ENSACIG00000006247	safb	100	65.793	Amphilophus_citrinellus
ENSPLAG00000001614	safb	100	63.807	ENSAOCG00000006308	safb	100	64.826	Amphiprion_ocellaris
ENSPLAG00000001614	safb	100	66.476	ENSAPEG00000023342	safb	100	65.901	Amphiprion_percula
ENSPLAG00000001614	safb	100	65.262	ENSATEG00000004998	safb	100	63.968	Anabas_testudineus
ENSPLAG00000001614	safb	61	38.462	ENSAPLG00000005780	-	69	47.967	Anas_platyrhynchos
ENSPLAG00000001614	safb	95	40.509	ENSANAG00000028821	SAFB	94	38.721	Aotus_nancymaae
ENSPLAG00000001614	safb	100	67.622	ENSACLG00000001926	safb	100	67.861	Astatotilapia_calliptera
ENSPLAG00000001614	safb	97	53.211	ENSAMXG00000018154	safb	99	55.401	Astyanax_mexicanus
ENSPLAG00000001614	safb	98	40.680	ENSBTAG00000007875	SAFB	95	37.955	Bos_taurus
ENSPLAG00000001614	safb	78	48.911	ENSCJAG00000017081	SAFB	93	44.922	Callithrix_jacchus
ENSPLAG00000001614	safb	68	39.482	ENSCAFG00000018803	SAFB	81	37.694	Canis_familiaris
ENSPLAG00000001614	safb	68	39.550	ENSCAFG00020018943	SAFB	94	38.677	Canis_lupus_dingo
ENSPLAG00000001614	safb	98	40.924	ENSCHIG00000007262	SAFB	95	38.312	Capra_hircus
ENSPLAG00000001614	safb	53	42.942	ENSTSYG00000001851	-	88	40.206	Carlito_syrichta
ENSPLAG00000001614	safb	95	40.618	ENSCCAG00000020193	SAFB	94	38.833	Cebus_capucinus
ENSPLAG00000001614	safb	95	40.185	ENSCATG00000029994	SAFB	94	38.833	Cercocebus_atys
ENSPLAG00000001614	safb	66	39.448	ENSCLAG00000007734	SAFB	94	40.567	Chinchilla_lanigera
ENSPLAG00000001614	safb	95	39.594	ENSCSAG00000009949	SAFB	94	38.833	Chlorocebus_sabaeus
ENSPLAG00000001614	safb	90	40.547	ENSCPBG00000010928	-	92	41.899	Chrysemys_picta_bellii
ENSPLAG00000001614	safb	71	45.042	ENSCPBG00000010936	-	69	50.324	Chrysemys_picta_bellii
ENSPLAG00000001614	safb	95	34.852	ENSCANG00000004774	-	60	62.121	Colobus_angolensis_palliatus
ENSPLAG00000001614	safb	94	39.274	ENSCANG00000019754	-	93	37.363	Colobus_angolensis_palliatus
ENSPLAG00000001614	safb	66	39.060	ENSCGRG00001002254	Safb	96	36.950	Cricetulus_griseus_chok1gshd
ENSPLAG00000001614	safb	99	61.718	ENSCSEG00000019870	safb	89	64.478	Cynoglossus_semilaevis
ENSPLAG00000001614	safb	100	80.706	ENSCVAG00000002226	safb	100	80.706	Cyprinodon_variegatus
ENSPLAG00000001614	safb	97	53.802	ENSDARG00000020467	safb	99	54.713	Danio_rerio
ENSPLAG00000001614	safb	67	39.610	ENSDNOG00000015746	SAFB	95	35.022	Dasypus_novemcinctus
ENSPLAG00000001614	safb	66	38.934	ENSEASG00005023019	SAFB	96	37.447	Equus_asinus_asinus
ENSPLAG00000001614	safb	99	55.991	ENSELUG00000022327	safb	99	55.234	Esox_lucius
ENSPLAG00000001614	safb	68	40.131	ENSFCAG00000011835	SAFB	94	38.634	Felis_catus
ENSPLAG00000001614	safb	66	40.635	ENSFALG00000013882	-	87	42.586	Ficedula_albicollis
ENSPLAG00000001614	safb	71	37.690	ENSFDAG00000020306	SAFB	75	39.123	Fukomys_damarensis
ENSPLAG00000001614	safb	100	82.581	ENSFHEG00000004219	safb	100	83.709	Fundulus_heteroclitus
ENSPLAG00000001614	safb	100	56.897	ENSGMOG00000014280	safb	100	57.798	Gadus_morhua
ENSPLAG00000001614	safb	68	39.104	ENSGALG00000013365	-	65	48.609	Gallus_gallus
ENSPLAG00000001614	safb	100	95.311	ENSGAFG00000016162	safb	100	95.311	Gambusia_affinis
ENSPLAG00000001614	safb	100	60.894	ENSGACG00000011385	safb	100	61.356	Gasterosteus_aculeatus
ENSPLAG00000001614	safb	95	45.475	ENSGAGG00000008424	-	97	44.873	Gopherus_agassizii
ENSPLAG00000001614	safb	68	49.180	ENSGAGG00000017702	-	85	50.973	Gopherus_agassizii
ENSPLAG00000001614	safb	95	40.300	ENSGGOG00000015109	SAFB	94	38.826	Gorilla_gorilla
ENSPLAG00000001614	safb	100	63.822	ENSHBUG00000009218	safb	100	63.341	Haplochromis_burtoni
ENSPLAG00000001614	safb	66	38.799	ENSHGLG00000015883	SAFB	94	38.239	Heterocephalus_glaber_female
ENSPLAG00000001614	safb	59	37.427	ENSHGLG00100004228	SAFB	93	35.281	Heterocephalus_glaber_male
ENSPLAG00000001614	safb	94	58.728	ENSHCOG00000001705	safb	99	58.552	Hippocampus_comes
ENSPLAG00000001614	safb	100	53.950	ENSIPUG00000024869	safb2	100	56.690	Ictalurus_punctatus
ENSPLAG00000001614	safb	100	69.464	ENSKMAG00000022308	safb	100	69.778	Kryptolebias_marmoratus
ENSPLAG00000001614	safb	100	64.334	ENSLBEG00000006015	safb	100	64.447	Labrus_bergylta
ENSPLAG00000001614	safb	66	38.986	ENSLACG00000018090	SAFB	97	44.493	Latimeria_chalumnae
ENSPLAG00000001614	safb	98	53.066	ENSLOCG00000003613	safb	99	52.304	Lepisosteus_oculatus
ENSPLAG00000001614	safb	95	39.978	ENSLAFG00000003840	SAFB	95	39.019	Loxodonta_africana
ENSPLAG00000001614	safb	95	40.185	ENSMFAG00000003885	SAFB	94	38.945	Macaca_fascicularis
ENSPLAG00000001614	safb	95	40.185	ENSMMUG00000017970	SAFB	94	38.833	Macaca_mulatta
ENSPLAG00000001614	safb	95	38.280	ENSMNEG00000035637	SAFB	94	36.324	Macaca_nemestrina
ENSPLAG00000001614	safb	62	36.860	ENSMLEG00000038637	SAFB	94	35.630	Mandrillus_leucophaeus
ENSPLAG00000001614	safb	100	64.351	ENSMAMG00000003357	safb	91	62.828	Mastacembelus_armatus
ENSPLAG00000001614	safb	100	67.742	ENSMZEG00005009120	safb	100	67.981	Maylandia_zebra
ENSPLAG00000001614	safb	50	51.389	ENSMGAG00000001051	-	82	51.306	Meleagris_gallopavo
ENSPLAG00000001614	safb	65	42.970	ENSMGAG00000001101	-	67	48.689	Meleagris_gallopavo
ENSPLAG00000001614	safb	67	39.737	ENSMICG00000008739	-	94	37.459	Microcebus_murinus
ENSPLAG00000001614	safb	94	40.535	ENSMODG00000001236	SAFB	93	38.462	Monodelphis_domestica
ENSPLAG00000001614	safb	100	64.752	ENSMALG00000020330	safb	100	64.189	Monopterus_albus
ENSPLAG00000001614	safb	68	38.710	ENSMPUG00000006123	SAFB	88	36.797	Mustela_putorius_furo
ENSPLAG00000001614	safb	98	41.379	ENSMLUG00000001081	SAFB	94	37.013	Myotis_lucifugus
ENSPLAG00000001614	safb	94	40.373	ENSNLEG00000013551	SAFB	97	39.002	Nomascus_leucogenys
ENSPLAG00000001614	safb	66	39.073	ENSODEG00000014838	SAFB	94	37.732	Octodon_degus
ENSPLAG00000001614	safb	100	65.148	ENSONIG00000002318	safb	100	65.148	Oreochromis_niloticus
ENSPLAG00000001614	safb	86	35.749	ENSOCUG00000014628	SAFB	64	40.876	Oryctolagus_cuniculus
ENSPLAG00000001614	safb	98	65.108	ENSORLG00000016989	safb	100	64.202	Oryzias_latipes
ENSPLAG00000001614	safb	98	61.776	ENSORLG00020000404	safb	100	61.325	Oryzias_latipes_hni
ENSPLAG00000001614	safb	98	65.108	ENSORLG00015010733	safb	100	64.588	Oryzias_latipes_hsok
ENSPLAG00000001614	safb	100	65.610	ENSOMEG00000009066	safb	100	65.100	Oryzias_melastigma
ENSPLAG00000001614	safb	66	40.234	ENSOGAG00000027769	SAFB	92	39.408	Otolemur_garnettii
ENSPLAG00000001614	safb	95	37.740	ENSOARG00000007662	-	95	37.201	Ovis_aries
ENSPLAG00000001614	safb	82	36.612	ENSOARG00000007856	-	98	35.294	Ovis_aries
ENSPLAG00000001614	safb	95	40.300	ENSPPAG00000035129	SAFB	94	38.833	Pan_paniscus
ENSPLAG00000001614	safb	68	40.131	ENSPPRG00000017197	SAFB	94	38.634	Panthera_pardus
ENSPLAG00000001614	safb	95	40.300	ENSPTRG00000010335	SAFB	94	38.833	Pan_troglodytes
ENSPLAG00000001614	safb	95	40.066	ENSPANG00000007770	SAFB	94	39.057	Papio_anubis
ENSPLAG00000001614	safb	99	52.909	ENSPKIG00000009902	safb	99	54.015	Paramormyrops_kingsleyae
ENSPLAG00000001614	safb	98	42.171	ENSPSIG00000009367	-	94	41.353	Pelodiscus_sinensis
ENSPLAG00000001614	safb	98	42.949	ENSPSIG00000011679	-	96	44.070	Pelodiscus_sinensis
ENSPLAG00000001614	safb	100	95.437	ENSPFOG00000007745	safb	100	95.437	Poecilia_formosa
ENSPLAG00000001614	safb	100	95.057	ENSPMEG00000021023	safb	100	95.057	Poecilia_mexicana
ENSPLAG00000001614	safb	100	95.057	ENSPREG00000012496	safb	100	95.057	Poecilia_reticulata
ENSPLAG00000001614	safb	95	39.465	ENSPPYG00000009428	SAFB	94	38.583	Pongo_abelii
ENSPLAG00000001614	safb	66	34.531	ENSPCAG00000006475	SAFB	94	35.674	Procavia_capensis
ENSPLAG00000001614	safb	95	37.300	ENSPCOG00000014090	SAFB	93	35.315	Propithecus_coquereli
ENSPLAG00000001614	safb	69	57.000	ENSPVAG00000004913	SAFB	68	56.000	Pteropus_vampyrus
ENSPLAG00000001614	safb	99	53.444	ENSPNAG00000021838	safb	99	57.060	Pygocentrus_nattereri
ENSPLAG00000001614	safb	95	38.780	ENSRBIG00000042509	SAFB	73	60.606	Rhinopithecus_bieti
ENSPLAG00000001614	safb	95	39.977	ENSRROG00000029278	SAFB	94	38.833	Rhinopithecus_roxellana
ENSPLAG00000001614	safb	95	40.728	ENSSBOG00000026291	SAFB	94	38.721	Saimiri_boliviensis_boliviensis
ENSPLAG00000001614	safb	99	54.405	ENSSFOG00015008156	safb	99	54.636	Scleropages_formosus
ENSPLAG00000001614	safb	100	64.432	ENSSMAG00000009316	safb	100	64.619	Scophthalmus_maximus
ENSPLAG00000001614	safb	100	65.666	ENSSDUG00000009652	safb	100	66.867	Seriola_dumerili
ENSPLAG00000001614	safb	100	65.367	ENSSLDG00000001670	safb	100	64.638	Seriola_lalandi_dorsalis
ENSPLAG00000001614	safb	55	40.491	ENSSPUG00000009747	-	92	37.581	Sphenodon_punctatus
ENSPLAG00000001614	safb	100	61.275	ENSSPAG00000015682	safb	91	70.029	Stegastes_partitus
ENSPLAG00000001614	safb	66	39.044	ENSSSCG00000013522	SAFB	94	38.060	Sus_scrofa
ENSPLAG00000001614	safb	100	65.933	ENSTRUG00000003567	safb	100	64.426	Takifugu_rubripes
ENSPLAG00000001614	safb	66	63.921	ENSTNIG00000015470	safb	76	63.262	Tetraodon_nigroviridis
ENSPLAG00000001614	safb	90	72.222	ENSTTRG00000013588	SAFB	62	72.222	Tursiops_truncatus
ENSPLAG00000001614	safb	75	38.806	ENSUMAG00000009734	SAFB	55	62.121	Ursus_maritimus
ENSPLAG00000001614	safb	68	39.644	ENSVVUG00000013720	SAFB	81	38.164	Vulpes_vulpes
ENSPLAG00000001614	safb	51	58.000	ENSXETG00000008755	safb	73	61.538	Xenopus_tropicalis
ENSPLAG00000001614	safb	100	92.902	ENSXMAG00000003458	safb	100	92.776	Xiphophorus_maculatus