EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001769 (Gene tree)
Gene ID: 106951254
Gene Symbol: si:dkey-93h22.8
Alias: -
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator-related 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 9671 bases
Position: chrKQ545764.1:74798-84468
Accession: 106951254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000000852	RRM_1	PF00076.22	4.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015737	-	3669	XM_015038657	ENSPLAP00000000852	1005 (aa)	XP_014894143	-

Gene Model

Click here to download ENSPLAG00000001769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001769's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001769	si:dkey-93h22.8	84	86.928	ENSAPOG00000001094	si:dkey-93h22.8	84	85.443	Acanthochromis_polyacanthus
ENSPLAG00000001769	si:dkey-93h22.8	91	84.810	ENSAOCG00000008140	si:dkey-93h22.8	77	38.651	Amphiprion_ocellaris
ENSPLAG00000001769	si:dkey-93h22.8	76	38.075	ENSAPEG00000014568	si:dkey-93h22.8	77	38.437	Amphiprion_percula
ENSPLAG00000001769	si:dkey-93h22.8	85	82.803	ENSACLG00000019359	-	55	82.911	Astatotilapia_calliptera
ENSPLAG00000001769	si:dkey-93h22.8	70	81.491	ENSGAFG00000011120	si:dkey-93h22.8	98	84.770	Gambusia_affinis
ENSPLAG00000001769	si:dkey-93h22.8	58	82.803	ENSHBUG00000019347	-	55	82.911	Haplochromis_burtoni
ENSPLAG00000001769	si:dkey-93h22.8	58	82.051	ENSLBEG00000024075	-	56	81.646	Labrus_bergylta
ENSPLAG00000001769	si:dkey-93h22.8	62	83.974	ENSMAMG00000011169	-	59	83.544	Mastacembelus_armatus
ENSPLAG00000001769	si:dkey-93h22.8	85	82.803	ENSMZEG00005008228	-	57	82.911	Maylandia_zebra
ENSPLAG00000001769	si:dkey-93h22.8	57	80.128	ENSMALG00000005052	-	54	78.481	Monopterus_albus
ENSPLAG00000001769	si:dkey-93h22.8	100	96.515	ENSPFOG00000001320	si:dkey-93h22.8	100	96.515	Poecilia_formosa
ENSPLAG00000001769	si:dkey-93h22.8	100	95.837	ENSPMEG00000014605	si:dkey-93h22.8	100	95.837	Poecilia_mexicana
ENSPLAG00000001769	si:dkey-93h22.8	100	91.512	ENSPREG00000000446	si:dkey-93h22.8	100	91.512	Poecilia_reticulata
ENSPLAG00000001769	si:dkey-93h22.8	86	82.911	ENSPNYG00000002682	-	57	82.911	Pundamilia_nyererei
ENSPLAG00000001769	si:dkey-93h22.8	57	79.739	ENSSMAG00000005915	si:dkey-93h22.8	55	78.481	Scophthalmus_maximus
ENSPLAG00000001769	si:dkey-93h22.8	75	37.992	ENSSDUG00000001268	si:dkey-93h22.8	91	82.911	Seriola_dumerili
ENSPLAG00000001769	si:dkey-93h22.8	90	83.333	ENSSLDG00000012010	si:dkey-93h22.8	91	82.911	Seriola_lalandi_dorsalis
ENSPLAG00000001769	si:dkey-93h22.8	73	38.462	ENSSPAG00000010602	si:dkey-93h22.8	90	81.013	Stegastes_partitus
ENSPLAG00000001769	si:dkey-93h22.8	76	84.178	ENSXMAG00000000243	si:dkey-93h22.8	100	87.097	Xiphophorus_maculatus