EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000001856 (Gene tree)
Gene ID: 106964098
Gene Symbol: srsf2a
Alias: -
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3374 bases
Position: chrKQ546934.1:161153-164526
Accession: 106964098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019594	RRM_1	PF00076.22	8.3e-21	1	1
ENSPLAP00000019600	RRM_1	PF00076.22	8.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015617	-	1103	-	ENSPLAP00000019594	236 (aa)	-	UPI00072EC6F1
ENSPLAT00000015612	-	2915	XM_015059367	ENSPLAP00000019600	236 (aa)	XP_014914853	UPI00072EC6F1

Gene Model

Click here to download ENSPLAG00000001856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000001856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000001856	srsf2a	57	77.612	ENSG00000161547	SRSF2	82	94.393	Homo_sapiens
ENSPLAG00000001856	srsf2a	78	73.224	ENSACIG00000018502	srsf2a	90	72.903	Amphilophus_citrinellus
ENSPLAG00000001856	srsf2a	99	57.447	ENSCHOG00000014019	-	52	91.589	Choloepus_hoffmanni
ENSPLAG00000001856	srsf2a	100	95.763	ENSCVAG00000022056	srsf2a	100	95.763	Cyprinodon_variegatus
ENSPLAG00000001856	srsf2a	50	97.458	ENSDARG00000057484	srsf2a	100	97.458	Danio_rerio
ENSPLAG00000001856	srsf2a	76	53.039	ENSDNOG00000033905	-	53	63.000	Dasypus_novemcinctus
ENSPLAG00000001856	srsf2a	59	72.857	ENSDORG00000014460	Srsf2	53	88.073	Dipodomys_ordii
ENSPLAG00000001856	srsf2a	100	97.059	ENSFHEG00000010835	srsf2a	100	97.059	Fundulus_heteroclitus
ENSPLAG00000001856	srsf2a	59	75.714	ENSGGOG00000014378	SRSF2	52	94.340	Gorilla_gorilla
ENSPLAG00000001856	srsf2a	50	57.983	ENSMLUG00000026613	-	52	59.813	Myotis_lucifugus
ENSPLAG00000001856	srsf2a	56	77.273	ENSPMGG00000006860	-	60	96.000	Periophthalmus_magnuspinnatus
ENSPLAG00000001856	srsf2a	100	99.160	ENSPFOG00000020356	srsf2a	100	99.160	Poecilia_formosa
ENSPLAG00000001856	srsf2a	100	99.160	ENSPMEG00000008714	srsf2a	100	99.160	Poecilia_mexicana
ENSPLAG00000001856	srsf2a	100	98.319	ENSPREG00000003658	srsf2a	100	98.319	Poecilia_reticulata
ENSPLAG00000001856	srsf2a	97	61.572	ENSSDUG00000014762	srsf2b	51	93.519	Seriola_dumerili
ENSPLAG00000001856	srsf2a	59	78.571	ENSSPUG00000007582	-	50	94.340	Sphenodon_punctatus
ENSPLAG00000001856	srsf2a	61	63.194	ENSSSCG00000012212	-	52	73.529	Sus_scrofa
ENSPLAG00000001856	srsf2a	100	99.153	ENSXMAG00000015676	srsf2a	100	99.153	Xiphophorus_maculatus