EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002006 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: -
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 56038 bases
Position: chrKQ546933.1:65360-121397
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019681	SRRM_C	PF15230.6	4.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015409	-	1260	-	ENSPLAP00000019681	419 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000002006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002006	srrm4	99	59.765	ENSACIG00000002171	srrm4	93	63.232	Amphilophus_citrinellus
ENSPLAG00000002006	srrm4	99	64.419	ENSATEG00000005330	srrm4	99	62.069	Anabas_testudineus
ENSPLAG00000002006	srrm4	79	60.231	ENSACLG00000023532	srrm4	98	62.719	Astatotilapia_calliptera
ENSPLAG00000002006	srrm4	96	50.350	ENSCSEG00000007689	-	88	50.000	Cynoglossus_semilaevis
ENSPLAG00000002006	srrm4	66	97.143	ENSELUG00000004986	srrm4	61	97.143	Esox_lucius
ENSPLAG00000002006	srrm4	79	72.434	ENSFHEG00000005091	srrm4	92	69.529	Fundulus_heteroclitus
ENSPLAG00000002006	srrm4	99	80.837	ENSGAFG00000006706	srrm4	99	80.879	Gambusia_affinis
ENSPLAG00000002006	srrm4	91	73.585	ENSHBUG00000010505	srrm4	66	94.872	Haplochromis_burtoni
ENSPLAG00000002006	srrm4	71	75.472	ENSLBEG00000008471	srrm4	58	82.979	Labrus_bergylta
ENSPLAG00000002006	srrm4	79	60.231	ENSMZEG00005021733	srrm4	98	62.719	Maylandia_zebra
ENSPLAG00000002006	srrm4	75	92.105	ENSMMOG00000000228	srrm4	88	55.330	Mola_mola
ENSPLAG00000002006	srrm4	88	94.595	ENSNBRG00000015313	srrm4	83	94.595	Neolamprologus_brichardi
ENSPLAG00000002006	srrm4	79	57.337	ENSONIG00000010552	srrm4	66	94.872	Oreochromis_niloticus
ENSPLAG00000002006	srrm4	59	92.982	ENSORLG00020009749	srrm4	82	50.000	Oryzias_latipes_hni
ENSPLAG00000002006	srrm4	81	83.777	ENSPFOG00000014600	srrm4	99	84.916	Poecilia_formosa
ENSPLAG00000002006	srrm4	100	90.521	ENSPMEG00000017802	srrm4	100	90.544	Poecilia_mexicana
ENSPLAG00000002006	srrm4	100	80.995	ENSPREG00000004567	srrm4	100	82.127	Poecilia_reticulata
ENSPLAG00000002006	srrm4	99	57.516	ENSPNYG00000007785	srrm4	98	61.438	Pundamilia_nyererei
ENSPLAG00000002006	srrm4	79	58.559	ENSSMAG00000012257	srrm4	58	60.806	Scophthalmus_maximus
ENSPLAG00000002006	srrm4	99	68.304	ENSSDUG00000017519	srrm4	99	65.875	Seriola_dumerili
ENSPLAG00000002006	srrm4	99	64.574	ENSSLDG00000015130	srrm4	97	65.247	Seriola_lalandi_dorsalis
ENSPLAG00000002006	srrm4	90	65.116	ENSSPAG00000016190	srrm4	99	68.513	Stegastes_partitus
ENSPLAG00000002006	srrm4	94	79.245	ENSXMAG00000002658	srrm4	64	100.000	Xiphophorus_maculatus