EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002072 (Gene tree)
Gene ID: 106947367
Gene Symbol: rbm47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 11656 bases
Position: chrKQ545552.1:456931-468586
Accession: 106947367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001101	RRM_1	PF00076.22	7.1e-39	1	3
ENSPLAP00000001101	RRM_1	PF00076.22	7.1e-39	2	3
ENSPLAP00000001101	RRM_1	PF00076.22	7.1e-39	3	3
ENSPLAP00000001097	RRM_1	PF00076.22	1.4e-38	1	3
ENSPLAP00000001097	RRM_1	PF00076.22	1.4e-38	2	3
ENSPLAP00000001097	RRM_1	PF00076.22	1.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015320	-	5972	XM_015032300	ENSPLAP00000001097	610 (aa)	XP_014887786	UPI00072EA187
ENSPLAT00000015324	-	1563	XM_015032313	ENSPLAP00000001101	520 (aa)	XP_014887799	-

Gene Model

Click here to download ENSPLAG00000002072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002072	rbm47	58	53.595	ENSPLAG00000008657	hnrnpr	50	53.205
ENSPLAG00000002072	rbm47	59	52.396	ENSPLAG00000015448	syncripl	73	47.174
ENSPLAG00000002072	rbm47	58	69.967	ENSPLAG00000000026	a1cf	87	53.510
ENSPLAG00000002072	rbm47	58	69.967	ENSPLAG00000001210	-	87	53.510
ENSPLAG00000002072	rbm47	55	68.990	ENSPLAG00000004541	rbm46	54	67.213

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002072	rbm47	100	80.481	ENSG00000163694	RBM47	100	84.793	Homo_sapiens
ENSPLAG00000002072	rbm47	100	92.973	ENSAPOG00000011062	rbm47	100	93.059	Acanthochromis_polyacanthus
ENSPLAG00000002072	rbm47	100	80.267	ENSAMEG00000009672	RBM47	96	79.310	Ailuropoda_melanoleuca
ENSPLAG00000002072	rbm47	100	92.432	ENSACIG00000011531	rbm47	97	90.451	Amphilophus_citrinellus
ENSPLAG00000002072	rbm47	100	92.973	ENSAOCG00000022245	rbm47	100	93.316	Amphiprion_ocellaris
ENSPLAG00000002072	rbm47	100	92.973	ENSAPEG00000018304	rbm47	100	93.316	Amphiprion_percula
ENSPLAG00000002072	rbm47	100	89.362	ENSATEG00000018400	rbm47	100	89.362	Anabas_testudineus
ENSPLAG00000002072	rbm47	100	84.392	ENSAPLG00000013974	RBM47	96	78.374	Anas_platyrhynchos
ENSPLAG00000002072	rbm47	100	81.432	ENSACAG00000011833	RBM47	97	78.351	Anolis_carolinensis
ENSPLAG00000002072	rbm47	100	82.181	ENSANAG00000029440	RBM47	95	83.511	Aotus_nancymaae
ENSPLAG00000002072	rbm47	100	89.091	ENSACLG00000016902	rbm47	99	90.537	Astatotilapia_calliptera
ENSPLAG00000002072	rbm47	97	89.859	ENSAMXG00000021794	rbm47	100	81.199	Astyanax_mexicanus
ENSPLAG00000002072	rbm47	100	82.181	ENSBTAG00000002356	RBM47	96	79.896	Bos_taurus
ENSPLAG00000002072	rbm47	97	85.352	ENSCJAG00000019385	RBM47	95	83.511	Callithrix_jacchus
ENSPLAG00000002072	rbm47	97	84.419	ENSCAFG00000015898	RBM47	96	79.304	Canis_familiaris
ENSPLAG00000002072	rbm47	81	84.136	ENSCAFG00020010558	RBM47	89	85.112	Canis_lupus_dingo
ENSPLAG00000002072	rbm47	100	81.915	ENSCHIG00000026214	RBM47	96	79.723	Capra_hircus
ENSPLAG00000002072	rbm47	84	67.773	ENSTSYG00000033612	RBM47	93	67.578	Carlito_syrichta
ENSPLAG00000002072	rbm47	100	74.064	ENSCAPG00000008426	RBM47	100	71.285	Cavia_aperea
ENSPLAG00000002072	rbm47	100	81.333	ENSCPOG00000014100	RBM47	100	79.397	Cavia_porcellus
ENSPLAG00000002072	rbm47	99	54.634	ENSCCAG00000024397	-	95	56.076	Cebus_capucinus
ENSPLAG00000002072	rbm47	100	83.245	ENSCCAG00000030129	-	95	83.245	Cebus_capucinus
ENSPLAG00000002072	rbm47	100	80.481	ENSCATG00000042064	RBM47	95	83.511	Cercocebus_atys
ENSPLAG00000002072	rbm47	100	80.800	ENSCLAG00000001684	RBM47	100	82.400	Chinchilla_lanigera
ENSPLAG00000002072	rbm47	100	80.481	ENSCSAG00000017060	RBM47	96	79.793	Chlorocebus_sabaeus
ENSPLAG00000002072	rbm47	74	87.869	ENSCHOG00000011731	RBM47	84	79.858	Choloepus_hoffmanni
ENSPLAG00000002072	rbm47	100	85.638	ENSCPBG00000013831	RBM47	96	81.897	Chrysemys_picta_bellii
ENSPLAG00000002072	rbm47	100	81.649	ENSCANG00000019997	RBM47	95	83.245	Colobus_angolensis_palliatus
ENSPLAG00000002072	rbm47	100	80.952	ENSCGRG00001000623	-	100	75.706	Cricetulus_griseus_chok1gshd
ENSPLAG00000002072	rbm47	100	74.169	ENSCGRG00001020102	-	96	81.073	Cricetulus_griseus_chok1gshd
ENSPLAG00000002072	rbm47	100	73.913	ENSCGRG00000014760	-	96	81.073	Cricetulus_griseus_crigri
ENSPLAG00000002072	rbm47	100	80.423	ENSCGRG00000007762	-	100	81.646	Cricetulus_griseus_crigri
ENSPLAG00000002072	rbm47	100	90.591	ENSCSEG00000004545	rbm47	97	88.062	Cynoglossus_semilaevis
ENSPLAG00000002072	rbm47	100	95.946	ENSCVAG00000020144	rbm47	100	95.202	Cyprinodon_variegatus
ENSPLAG00000002072	rbm47	100	81.922	ENSDARG00000061985	rbm47	100	82.573	Danio_rerio
ENSPLAG00000002072	rbm47	100	82.181	ENSDNOG00000046854	RBM47	96	79.203	Dasypus_novemcinctus
ENSPLAG00000002072	rbm47	100	81.003	ENSDORG00000010144	Rbm47	100	75.806	Dipodomys_ordii
ENSPLAG00000002072	rbm47	97	82.633	ENSETEG00000009194	RBM47	100	75.890	Echinops_telfairi
ENSPLAG00000002072	rbm47	100	54.637	ENSEBUG00000011912	rbm47	96	60.549	Eptatretus_burgeri
ENSPLAG00000002072	rbm47	100	81.383	ENSEASG00005008443	RBM47	100	76.221	Equus_asinus_asinus
ENSPLAG00000002072	rbm47	100	81.383	ENSECAG00000004400	RBM47	100	76.221	Equus_caballus
ENSPLAG00000002072	rbm47	70	87.560	ENSEEUG00000001194	RBM47	72	89.952	Erinaceus_europaeus
ENSPLAG00000002072	rbm47	100	86.386	ENSELUG00000006148	rbm47	100	85.644	Esox_lucius
ENSPLAG00000002072	rbm47	100	80.267	ENSFCAG00000012399	RBM47	100	76.835	Felis_catus
ENSPLAG00000002072	rbm47	100	84.043	ENSFALG00000002861	RBM47	96	81.282	Ficedula_albicollis
ENSPLAG00000002072	rbm47	100	80.267	ENSFDAG00000016326	RBM47	100	76.884	Fukomys_damarensis
ENSPLAG00000002072	rbm47	100	97.011	ENSFHEG00000007938	rbm47	100	92.635	Fundulus_heteroclitus
ENSPLAG00000002072	rbm47	100	84.772	ENSGMOG00000014802	rbm47	100	82.524	Gadus_morhua
ENSPLAG00000002072	rbm47	71	84.574	ENSGALG00000014267	RBM47	99	84.574	Gallus_gallus
ENSPLAG00000002072	rbm47	71	99.185	ENSGAFG00000020571	rbm47	98	99.185	Gambusia_affinis
ENSPLAG00000002072	rbm47	100	86.579	ENSGACG00000016223	rbm47	100	87.879	Gasterosteus_aculeatus
ENSPLAG00000002072	rbm47	100	85.372	ENSGAGG00000020051	RBM47	96	81.897	Gopherus_agassizii
ENSPLAG00000002072	rbm47	100	80.481	ENSGGOG00000001367	RBM47	95	83.511	Gorilla_gorilla
ENSPLAG00000002072	rbm47	100	89.091	ENSHBUG00000003520	rbm47	100	89.141	Haplochromis_burtoni
ENSPLAG00000002072	rbm47	100	60.152	ENSHGLG00000016914	RBM47	100	79.114	Heterocephalus_glaber_female
ENSPLAG00000002072	rbm47	100	79.843	ENSHGLG00100014028	-	100	79.114	Heterocephalus_glaber_male
ENSPLAG00000002072	rbm47	100	76.533	ENSHGLG00100003071	-	100	76.533	Heterocephalus_glaber_male
ENSPLAG00000002072	rbm47	99	90.746	ENSHCOG00000002074	rbm47	99	90.746	Hippocampus_comes
ENSPLAG00000002072	rbm47	100	88.618	ENSIPUG00000004743	rbm47	100	81.789	Ictalurus_punctatus
ENSPLAG00000002072	rbm47	100	80.533	ENSSTOG00000004727	RBM47	100	80.380	Ictidomys_tridecemlineatus
ENSPLAG00000002072	rbm47	97	85.876	ENSJJAG00000013823	Rbm47	96	79.066	Jaculus_jaculus
ENSPLAG00000002072	rbm47	100	92.287	ENSKMAG00000000084	rbm47	99	93.350	Kryptolebias_marmoratus
ENSPLAG00000002072	rbm47	100	90.885	ENSLBEG00000008436	rbm47	99	91.282	Labrus_bergylta
ENSPLAG00000002072	rbm47	100	85.411	ENSLACG00000007196	RBM47	96	80.796	Latimeria_chalumnae
ENSPLAG00000002072	rbm47	100	86.327	ENSLOCG00000012966	rbm47	92	84.055	Lepisosteus_oculatus
ENSPLAG00000002072	rbm47	100	81.818	ENSLAFG00000011998	RBM47	97	79.549	Loxodonta_africana
ENSPLAG00000002072	rbm47	100	80.481	ENSMFAG00000037967	RBM47	95	83.511	Macaca_fascicularis
ENSPLAG00000002072	rbm47	100	80.481	ENSMMUG00000012036	RBM47	100	82.902	Macaca_mulatta
ENSPLAG00000002072	rbm47	100	80.481	ENSMNEG00000040774	RBM47	95	83.511	Macaca_nemestrina
ENSPLAG00000002072	rbm47	100	82.857	ENSMLEG00000041432	RBM47	97	89.116	Mandrillus_leucophaeus
ENSPLAG00000002072	rbm47	100	89.378	ENSMAMG00000019143	rbm47	100	92.288	Mastacembelus_armatus
ENSPLAG00000002072	rbm47	100	89.091	ENSMZEG00005023659	rbm47	99	90.537	Maylandia_zebra
ENSPLAG00000002072	rbm47	100	85.106	ENSMGAG00000012226	RBM47	96	81.379	Meleagris_gallopavo
ENSPLAG00000002072	rbm47	100	80.475	ENSMAUG00000006493	Rbm47	100	81.646	Mesocricetus_auratus
ENSPLAG00000002072	rbm47	97	82.051	ENSMICG00000026417	RBM47	96	84.831	Microcebus_murinus
ENSPLAG00000002072	rbm47	100	80.423	ENSMOCG00000021170	Rbm47	100	81.013	Microtus_ochrogaster
ENSPLAG00000002072	rbm47	100	88.342	ENSMMOG00000007260	rbm47	100	88.216	Mola_mola
ENSPLAG00000002072	rbm47	100	84.000	ENSMODG00000007003	RBM47	96	80.035	Monodelphis_domestica
ENSPLAG00000002072	rbm47	99	81.543	ENSMODG00000020561	-	96	74.087	Monodelphis_domestica
ENSPLAG00000002072	rbm47	58	78.710	ENSMODG00000015426	-	97	78.710	Monodelphis_domestica
ENSPLAG00000002072	rbm47	100	92.412	ENSMALG00000005167	rbm47	100	90.306	Monopterus_albus
ENSPLAG00000002072	rbm47	100	80.423	MGP_CAROLIEiJ_G0027258	Rbm47	100	81.013	Mus_caroli
ENSPLAG00000002072	rbm47	100	80.688	ENSMUSG00000070780	Rbm47	100	81.013	Mus_musculus
ENSPLAG00000002072	rbm47	100	80.423	MGP_PahariEiJ_G0017040	Rbm47	100	81.013	Mus_pahari
ENSPLAG00000002072	rbm47	100	80.688	MGP_SPRETEiJ_G0028253	Rbm47	100	81.013	Mus_spretus
ENSPLAG00000002072	rbm47	100	81.333	ENSMPUG00000006177	RBM47	91	79.549	Mustela_putorius_furo
ENSPLAG00000002072	rbm47	99	84.324	ENSMLUG00000000889	RBM47	100	76.911	Myotis_lucifugus
ENSPLAG00000002072	rbm47	100	82.979	ENSNGAG00000003325	Rbm47	100	75.649	Nannospalax_galili
ENSPLAG00000002072	rbm47	100	89.351	ENSNBRG00000015092	rbm47	100	88.744	Neolamprologus_brichardi
ENSPLAG00000002072	rbm47	100	80.481	ENSNLEG00000017151	RBM47	95	83.511	Nomascus_leucogenys
ENSPLAG00000002072	rbm47	69	85.556	ENSMEUG00000009516	-	99	79.717	Notamacropus_eugenii
ENSPLAG00000002072	rbm47	85	84.232	ENSOPRG00000016507	-	75	84.232	Ochotona_princeps
ENSPLAG00000002072	rbm47	100	79.467	ENSODEG00000004873	RBM47	100	82.133	Octodon_degus
ENSPLAG00000002072	rbm47	100	88.871	ENSONIG00000009061	rbm47	100	88.871	Oreochromis_niloticus
ENSPLAG00000002072	rbm47	100	81.912	ENSOANG00000008978	RBM47	96	80.348	Ornithorhynchus_anatinus
ENSPLAG00000002072	rbm47	100	80.851	ENSOCUG00000012034	RBM47	100	82.181	Oryctolagus_cuniculus
ENSPLAG00000002072	rbm47	100	91.667	ENSORLG00000005847	rbm47	100	89.169	Oryzias_latipes
ENSPLAG00000002072	rbm47	100	91.667	ENSORLG00020005154	rbm47	100	89.169	Oryzias_latipes_hni
ENSPLAG00000002072	rbm47	100	91.667	ENSORLG00015000066	rbm47	100	89.169	Oryzias_latipes_hsok
ENSPLAG00000002072	rbm47	100	91.375	ENSOMEG00000010730	rbm47	100	88.216	Oryzias_melastigma
ENSPLAG00000002072	rbm47	100	75.467	ENSOGAG00000025193	-	96	72.569	Otolemur_garnettii
ENSPLAG00000002072	rbm47	100	81.600	ENSOGAG00000029367	-	96	79.549	Otolemur_garnettii
ENSPLAG00000002072	rbm47	100	70.479	ENSOARG00000012711	RBM47	96	71.750	Ovis_aries
ENSPLAG00000002072	rbm47	100	80.481	ENSPPAG00000029763	RBM47	95	83.511	Pan_paniscus
ENSPLAG00000002072	rbm47	94	81.452	ENSPPRG00000012873	RBM47	100	79.449	Panthera_pardus
ENSPLAG00000002072	rbm47	83	75.591	ENSPTIG00000017046	RBM47	100	75.984	Panthera_tigris_altaica
ENSPLAG00000002072	rbm47	100	80.481	ENSPTRG00000016006	RBM47	95	83.511	Pan_troglodytes
ENSPLAG00000002072	rbm47	100	80.481	ENSPANG00000005980	RBM47	95	83.511	Papio_anubis
ENSPLAG00000002072	rbm47	97	82.249	ENSPKIG00000005037	rbm47	100	78.699	Paramormyrops_kingsleyae
ENSPLAG00000002072	rbm47	99	78.967	ENSPKIG00000013431	RBM47	98	84.319	Paramormyrops_kingsleyae
ENSPLAG00000002072	rbm47	87	85.638	ENSPSIG00000017516	RBM47	93	83.137	Pelodiscus_sinensis
ENSPLAG00000002072	rbm47	94	90.210	ENSPMGG00000018540	rbm47	97	90.210	Periophthalmus_magnuspinnatus
ENSPLAG00000002072	rbm47	100	80.423	ENSPEMG00000011088	Rbm47	96	84.637	Peromyscus_maniculatus_bairdii
ENSPLAG00000002072	rbm47	100	99.673	ENSPFOG00000007997	rbm47	100	99.673	Poecilia_formosa
ENSPLAG00000002072	rbm47	100	99.728	ENSPMEG00000017492	rbm47	100	99.018	Poecilia_mexicana
ENSPLAG00000002072	rbm47	100	98.852	ENSPREG00000008456	rbm47	100	98.852	Poecilia_reticulata
ENSPLAG00000002072	rbm47	97	73.876	ENSPPYG00000014688	RBM47	98	69.863	Pongo_abelii
ENSPLAG00000002072	rbm47	88	79.790	ENSPCAG00000011879	RBM47	77	85.979	Procavia_capensis
ENSPLAG00000002072	rbm47	94	82.500	ENSPCOG00000023451	RBM47	96	84.551	Propithecus_coquereli
ENSPLAG00000002072	rbm47	100	80.106	ENSPVAG00000003812	RBM47	100	76.098	Pteropus_vampyrus
ENSPLAG00000002072	rbm47	100	89.091	ENSPNYG00000022868	rbm47	100	88.618	Pundamilia_nyererei
ENSPLAG00000002072	rbm47	100	85.013	ENSPNAG00000007940	rbm47	100	82.362	Pygocentrus_nattereri
ENSPLAG00000002072	rbm47	100	80.688	ENSRNOG00000002408	Rbm47	96	79.203	Rattus_norvegicus
ENSPLAG00000002072	rbm47	100	81.649	ENSRBIG00000039601	RBM47	95	83.245	Rhinopithecus_bieti
ENSPLAG00000002072	rbm47	100	81.649	ENSRROG00000044696	RBM47	95	83.245	Rhinopithecus_roxellana
ENSPLAG00000002072	rbm47	100	72.195	ENSSBOG00000028475	RBM47	97	83.202	Saimiri_boliviensis_boliviensis
ENSPLAG00000002072	rbm47	100	84.000	ENSSHAG00000017576	RBM47	100	84.000	Sarcophilus_harrisii
ENSPLAG00000002072	rbm47	94	82.995	ENSSFOG00015012445	rbm47	100	83.161	Scleropages_formosus
ENSPLAG00000002072	rbm47	98	76.159	ENSSFOG00015024101	RBM47	99	77.157	Scleropages_formosus
ENSPLAG00000002072	rbm47	100	87.725	ENSSMAG00000009744	rbm47	99	90.793	Scophthalmus_maximus
ENSPLAG00000002072	rbm47	100	91.689	ENSSDUG00000022684	rbm47	100	89.431	Seriola_dumerili
ENSPLAG00000002072	rbm47	100	92.683	ENSSLDG00000003109	rbm47	100	91.094	Seriola_lalandi_dorsalis
ENSPLAG00000002072	rbm47	85	77.564	ENSSARG00000001735	RBM47	84	81.333	Sorex_araneus
ENSPLAG00000002072	rbm47	100	83.777	ENSSPUG00000007515	RBM47	96	85.475	Sphenodon_punctatus
ENSPLAG00000002072	rbm47	100	92.973	ENSSPAG00000001257	rbm47	100	92.973	Stegastes_partitus
ENSPLAG00000002072	rbm47	100	81.915	ENSSSCG00000008796	RBM47	96	79.861	Sus_scrofa
ENSPLAG00000002072	rbm47	100	84.043	ENSTGUG00000008705	RBM47	96	80.589	Taeniopygia_guttata
ENSPLAG00000002072	rbm47	100	86.230	ENSTRUG00000014050	rbm47	99	89.483	Takifugu_rubripes
ENSPLAG00000002072	rbm47	100	88.216	ENSTNIG00000006127	rbm47	100	88.052	Tetraodon_nigroviridis
ENSPLAG00000002072	rbm47	87	79.412	ENSTBEG00000001607	RBM47	73	84.181	Tupaia_belangeri
ENSPLAG00000002072	rbm47	100	81.649	ENSTTRG00000002839	RBM47	96	79.376	Tursiops_truncatus
ENSPLAG00000002072	rbm47	100	80.267	ENSUAMG00000021346	RBM47	96	79.549	Ursus_americanus
ENSPLAG00000002072	rbm47	52	83.200	ENSVPAG00000000641	-	53	87.903	Vicugna_pacos
ENSPLAG00000002072	rbm47	97	84.986	ENSVVUG00000014774	RBM47	96	79.304	Vulpes_vulpes
ENSPLAG00000002072	rbm47	100	84.656	ENSXETG00000012802	rbm47	92	84.656	Xenopus_tropicalis
ENSPLAG00000002072	rbm47	100	96.731	ENSXCOG00000000780	rbm47	100	96.731	Xiphophorus_couchianus
ENSPLAG00000002072	rbm47	100	98.977	ENSXMAG00000009874	rbm47	100	98.977	Xiphophorus_maculatus