EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002081 (Gene tree)
Gene ID: 106947365
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: uncharacterized LOC106947365
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3469 bases
Position: chrKQ545552.1:437867-441335
Accession: 106947365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001114	zf-CCCH	PF00642.24	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015299	-	3381	XM_015032295	ENSPLAP00000001114	241 (aa)	XP_014887781	UPI00072DAB60

Gene Model

Click here to download ENSPLAG00000002081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002081	si:ch211-113e8.11	100	63.846	ENSAPOG00000010990	si:ch211-113e8.11	100	65.000	Acanthochromis_polyacanthus
ENSPLAG00000002081	si:ch211-113e8.11	58	73.793	ENSACIG00000011566	si:ch211-113e8.11	74	75.172	Amphilophus_citrinellus
ENSPLAG00000002081	si:ch211-113e8.11	100	64.729	ENSAOCG00000022156	si:ch211-113e8.11	100	64.479	Amphiprion_ocellaris
ENSPLAG00000002081	si:ch211-113e8.11	100	64.341	ENSAPEG00000018284	si:ch211-113e8.11	100	64.093	Amphiprion_percula
ENSPLAG00000002081	si:ch211-113e8.11	100	63.306	ENSATEG00000018391	si:ch211-113e8.11	100	64.516	Anabas_testudineus
ENSPLAG00000002081	si:ch211-113e8.11	100	66.129	ENSACLG00000017011	si:ch211-113e8.11	100	66.532	Astatotilapia_calliptera
ENSPLAG00000002081	si:ch211-113e8.11	97	49.618	ENSAMXG00000000733	si:ch211-113e8.11	97	50.391	Astyanax_mexicanus
ENSPLAG00000002081	si:ch211-113e8.11	99	59.766	ENSCSEG00000004538	si:ch211-113e8.11	99	58.203	Cynoglossus_semilaevis
ENSPLAG00000002081	si:ch211-113e8.11	100	75.000	ENSCVAG00000020156	si:ch211-113e8.11	99	73.577	Cyprinodon_variegatus
ENSPLAG00000002081	si:ch211-113e8.11	95	49.367	ENSDARG00000076585	si:ch211-113e8.11	97	51.055	Danio_rerio
ENSPLAG00000002081	si:ch211-113e8.11	58	30.968	FBgn0259728	CG42382	76	30.968	Drosophila_melanogaster
ENSPLAG00000002081	si:ch211-113e8.11	100	53.383	ENSELUG00000001130	si:ch211-113e8.11	100	51.908	Esox_lucius
ENSPLAG00000002081	si:ch211-113e8.11	100	68.571	ENSFHEG00000007870	si:ch211-113e8.11	99	66.939	Fundulus_heteroclitus
ENSPLAG00000002081	si:ch211-113e8.11	100	94.191	ENSGAFG00000020570	si:ch211-113e8.11	100	94.191	Gambusia_affinis
ENSPLAG00000002081	si:ch211-113e8.11	100	64.919	ENSHBUG00000003552	si:ch211-113e8.11	100	65.323	Haplochromis_burtoni
ENSPLAG00000002081	si:ch211-113e8.11	99	54.618	ENSHCOG00000002041	si:ch211-113e8.11	99	55.645	Hippocampus_comes
ENSPLAG00000002081	si:ch211-113e8.11	95	51.489	ENSIPUG00000002260	si:ch211-113e8.11	93	47.967	Ictalurus_punctatus
ENSPLAG00000002081	si:ch211-113e8.11	100	70.445	ENSKMAG00000000086	si:ch211-113e8.11	99	70.445	Kryptolebias_marmoratus
ENSPLAG00000002081	si:ch211-113e8.11	100	55.056	ENSLBEG00000008353	si:ch211-113e8.11	100	58.052	Labrus_bergylta
ENSPLAG00000002081	si:ch211-113e8.11	63	44.231	ENSLACG00000004304	si:ch211-113e8.11	77	44.231	Latimeria_chalumnae
ENSPLAG00000002081	si:ch211-113e8.11	98	59.363	ENSMAMG00000019098	si:ch211-113e8.11	90	62.996	Mastacembelus_armatus
ENSPLAG00000002081	si:ch211-113e8.11	100	66.802	ENSMZEG00005023658	si:ch211-113e8.11	100	67.206	Maylandia_zebra
ENSPLAG00000002081	si:ch211-113e8.11	72	66.480	ENSMMOG00000007254	si:ch211-113e8.11	84	66.480	Mola_mola
ENSPLAG00000002081	si:ch211-113e8.11	100	61.628	ENSMALG00000005110	si:ch211-113e8.11	100	61.240	Monopterus_albus
ENSPLAG00000002081	si:ch211-113e8.11	100	66.129	ENSNBRG00000015060	si:ch211-113e8.11	100	66.532	Neolamprologus_brichardi
ENSPLAG00000002081	si:ch211-113e8.11	100	56.917	ENSORLG00000023699	si:ch211-113e8.11	100	56.522	Oryzias_latipes
ENSPLAG00000002081	si:ch211-113e8.11	100	56.917	ENSORLG00020022094	si:ch211-113e8.11	100	56.522	Oryzias_latipes_hni
ENSPLAG00000002081	si:ch211-113e8.11	100	56.522	ENSORLG00015002588	si:ch211-113e8.11	100	56.126	Oryzias_latipes_hsok
ENSPLAG00000002081	si:ch211-113e8.11	100	58.065	ENSOMEG00000010624	si:ch211-113e8.11	100	59.677	Oryzias_melastigma
ENSPLAG00000002081	si:ch211-113e8.11	55	56.835	ENSPKIG00000023576	si:ch211-113e8.11	65	52.761	Paramormyrops_kingsleyae
ENSPLAG00000002081	si:ch211-113e8.11	96	55.274	ENSPMGG00000018547	si:ch211-113e8.11	97	54.701	Periophthalmus_magnuspinnatus
ENSPLAG00000002081	si:ch211-113e8.11	98	98.723	ENSPFOG00000007950	si:ch211-113e8.11	100	98.723	Poecilia_formosa
ENSPLAG00000002081	si:ch211-113e8.11	100	98.340	ENSPMEG00000017505	si:ch211-113e8.11	100	98.340	Poecilia_mexicana
ENSPLAG00000002081	si:ch211-113e8.11	100	93.361	ENSPREG00000008530	si:ch211-113e8.11	100	93.361	Poecilia_reticulata
ENSPLAG00000002081	si:ch211-113e8.11	100	66.532	ENSPNYG00000022856	si:ch211-113e8.11	100	66.935	Pundamilia_nyererei
ENSPLAG00000002081	si:ch211-113e8.11	98	41.961	ENSPNAG00000013782	si:ch211-113e8.11	66	48.485	Pygocentrus_nattereri
ENSPLAG00000002081	si:ch211-113e8.11	97	44.000	ENSSFOG00015000959	si:ch211-113e8.11	59	54.110	Scleropages_formosus
ENSPLAG00000002081	si:ch211-113e8.11	100	62.151	ENSSMAG00000009732	si:ch211-113e8.11	100	64.143	Scophthalmus_maximus
ENSPLAG00000002081	si:ch211-113e8.11	100	65.625	ENSSDUG00000000112	si:ch211-113e8.11	100	65.098	Seriola_dumerili
ENSPLAG00000002081	si:ch211-113e8.11	100	65.234	ENSSLDG00000003287	si:ch211-113e8.11	100	64.314	Seriola_lalandi_dorsalis
ENSPLAG00000002081	si:ch211-113e8.11	100	66.537	ENSSPAG00000001375	si:ch211-113e8.11	100	64.729	Stegastes_partitus
ENSPLAG00000002081	si:ch211-113e8.11	99	54.400	ENSTRUG00000023898	si:ch211-113e8.11	99	53.600	Takifugu_rubripes
ENSPLAG00000002081	si:ch211-113e8.11	100	92.946	ENSXMAG00000024104	si:ch211-113e8.11	100	92.946	Xiphophorus_maculatus