EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002141 (Gene tree)
Gene ID: 106959950
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 55653 bases
Position: chrKQ546452.1:92036-147688
Accession: 106959950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001154	S1	PF00575.23	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015230	-	6168	XM_015052825	ENSPLAP00000001154	1002 (aa)	XP_014908311	UPI00072E8AF9

Gene Model

Click here to download ENSPLAG00000002141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002141	si:ch211-117n7.8	97	51.968	ENSG00000068784	SRBD1	98	51.639	Homo_sapiens
ENSPLAG00000002141	si:ch211-117n7.8	100	78.746	ENSAPOG00000005103	si:ch211-117n7.8	100	79.097	Acanthochromis_polyacanthus
ENSPLAG00000002141	si:ch211-117n7.8	93	53.264	ENSAMEG00000005993	SRBD1	98	52.024	Ailuropoda_melanoleuca
ENSPLAG00000002141	si:ch211-117n7.8	97	79.596	ENSACIG00000009875	si:ch211-117n7.8	100	79.717	Amphilophus_citrinellus
ENSPLAG00000002141	si:ch211-117n7.8	100	78.368	ENSAOCG00000024718	si:ch211-117n7.8	100	78.368	Amphiprion_ocellaris
ENSPLAG00000002141	si:ch211-117n7.8	97	79.162	ENSAPEG00000002645	si:ch211-117n7.8	99	79.162	Amphiprion_percula
ENSPLAG00000002141	si:ch211-117n7.8	100	77.986	ENSATEG00000010844	si:ch211-117n7.8	100	77.986	Anabas_testudineus
ENSPLAG00000002141	si:ch211-117n7.8	92	54.974	ENSAPLG00000006313	SRBD1	100	52.794	Anas_platyrhynchos
ENSPLAG00000002141	si:ch211-117n7.8	97	51.365	ENSANAG00000025573	SRBD1	98	51.045	Aotus_nancymaae
ENSPLAG00000002141	si:ch211-117n7.8	100	79.610	ENSACLG00000024219	si:ch211-117n7.8	100	79.610	Astatotilapia_calliptera
ENSPLAG00000002141	si:ch211-117n7.8	100	62.273	ENSAMXG00000004294	SRBD1	100	64.557	Astyanax_mexicanus
ENSPLAG00000002141	si:ch211-117n7.8	83	56.890	ENSBTAG00000007508	SRBD1	97	50.150	Bos_taurus
ENSPLAG00000002141	si:ch211-117n7.8	97	51.365	ENSCJAG00000000727	SRBD1	98	50.945	Callithrix_jacchus
ENSPLAG00000002141	si:ch211-117n7.8	83	57.160	ENSCAFG00000002554	SRBD1	84	57.160	Canis_familiaris
ENSPLAG00000002141	si:ch211-117n7.8	83	58.273	ENSCAFG00020026284	SRBD1	97	58.273	Canis_lupus_dingo
ENSPLAG00000002141	si:ch211-117n7.8	83	57.362	ENSCHIG00000016535	SRBD1	82	57.362	Capra_hircus
ENSPLAG00000002141	si:ch211-117n7.8	83	57.814	ENSTSYG00000012797	SRBD1	99	51.170	Carlito_syrichta
ENSPLAG00000002141	si:ch211-117n7.8	97	52.270	ENSCPOG00000004773	SRBD1	98	52.270	Cavia_porcellus
ENSPLAG00000002141	si:ch211-117n7.8	97	51.362	ENSCCAG00000025589	SRBD1	98	51.043	Cebus_capucinus
ENSPLAG00000002141	si:ch211-117n7.8	97	51.972	ENSCATG00000039530	SRBD1	98	51.642	Cercocebus_atys
ENSPLAG00000002141	si:ch211-117n7.8	97	53.144	ENSCLAG00000008623	SRBD1	99	53.144	Chinchilla_lanigera
ENSPLAG00000002141	si:ch211-117n7.8	97	52.121	ENSCSAG00000013350	SRBD1	98	51.789	Chlorocebus_sabaeus
ENSPLAG00000002141	si:ch211-117n7.8	71	79.070	ENSCHOG00000003805	SRBD1	84	79.070	Choloepus_hoffmanni
ENSPLAG00000002141	si:ch211-117n7.8	83	58.442	ENSCPBG00000005677	SRBD1	100	52.335	Chrysemys_picta_bellii
ENSPLAG00000002141	si:ch211-117n7.8	78	40.075	ENSCING00000005950	-	99	40.075	Ciona_intestinalis
ENSPLAG00000002141	si:ch211-117n7.8	78	42.658	ENSCSAVG00000000861	-	99	42.658	Ciona_savignyi
ENSPLAG00000002141	si:ch211-117n7.8	85	56.351	ENSCANG00000016307	SRBD1	98	51.389	Colobus_angolensis_palliatus
ENSPLAG00000002141	si:ch211-117n7.8	99	51.479	ENSCGRG00001000513	Srbd1	99	51.479	Cricetulus_griseus_chok1gshd
ENSPLAG00000002141	si:ch211-117n7.8	99	51.479	ENSCGRG00000002283	Srbd1	99	51.479	Cricetulus_griseus_crigri
ENSPLAG00000002141	si:ch211-117n7.8	100	71.881	ENSCSEG00000000856	si:ch211-117n7.8	100	71.980	Cynoglossus_semilaevis
ENSPLAG00000002141	si:ch211-117n7.8	98	81.735	ENSCVAG00000020212	si:ch211-117n7.8	99	81.735	Cyprinodon_variegatus
ENSPLAG00000002141	si:ch211-117n7.8	93	51.951	ENSDNOG00000018686	SRBD1	96	51.951	Dasypus_novemcinctus
ENSPLAG00000002141	si:ch211-117n7.8	99	49.616	ENSDORG00000010468	Srbd1	99	49.616	Dipodomys_ordii
ENSPLAG00000002141	si:ch211-117n7.8	78	36.352	FBgn0051156	CG31156	79	36.478	Drosophila_melanogaster
ENSPLAG00000002141	si:ch211-117n7.8	73	58.577	ENSETEG00000000739	SRBD1	77	58.258	Echinops_telfairi
ENSPLAG00000002141	si:ch211-117n7.8	72	48.485	ENSEBUG00000008902	si:ch211-117n7.8	95	48.485	Eptatretus_burgeri
ENSPLAG00000002141	si:ch211-117n7.8	93	51.184	ENSEASG00005003132	SRBD1	98	56.274	Equus_asinus_asinus
ENSPLAG00000002141	si:ch211-117n7.8	93	53.141	ENSECAG00000013865	SRBD1	97	51.632	Equus_caballus
ENSPLAG00000002141	si:ch211-117n7.8	100	65.081	ENSELUG00000012592	si:ch211-117n7.8	100	65.176	Esox_lucius
ENSPLAG00000002141	si:ch211-117n7.8	97	51.707	ENSFCAG00000005101	SRBD1	98	51.383	Felis_catus
ENSPLAG00000002141	si:ch211-117n7.8	83	58.026	ENSFALG00000012966	SRBD1	97	52.439	Ficedula_albicollis
ENSPLAG00000002141	si:ch211-117n7.8	97	52.674	ENSFDAG00000016670	SRBD1	99	52.674	Fukomys_damarensis
ENSPLAG00000002141	si:ch211-117n7.8	100	85.392	ENSFHEG00000019480	si:ch211-117n7.8	100	85.392	Fundulus_heteroclitus
ENSPLAG00000002141	si:ch211-117n7.8	50	72.104	ENSGMOG00000018010	-	100	72.104	Gadus_morhua
ENSPLAG00000002141	si:ch211-117n7.8	83	59.552	ENSGALG00000009990	SRBD1	98	53.960	Gallus_gallus
ENSPLAG00000002141	si:ch211-117n7.8	100	94.611	ENSGAFG00000019664	si:ch211-117n7.8	100	94.711	Gambusia_affinis
ENSPLAG00000002141	si:ch211-117n7.8	62	82.555	ENSGACG00000010794	si:ch211-117n7.8	100	82.555	Gasterosteus_aculeatus
ENSPLAG00000002141	si:ch211-117n7.8	83	59.011	ENSGAGG00000006166	SRBD1	99	59.011	Gopherus_agassizii
ENSPLAG00000002141	si:ch211-117n7.8	97	51.919	ENSGGOG00000005910	SRBD1	99	51.919	Gorilla_gorilla
ENSPLAG00000002141	si:ch211-117n7.8	97	67.480	ENSHBUG00000013207	si:ch211-117n7.8	100	67.620	Haplochromis_burtoni
ENSPLAG00000002141	si:ch211-117n7.8	98	52.343	ENSHGLG00000018153	-	98	52.343	Heterocephalus_glaber_female
ENSPLAG00000002141	si:ch211-117n7.8	98	52.343	ENSHGLG00100015183	-	98	52.343	Heterocephalus_glaber_male
ENSPLAG00000002141	si:ch211-117n7.8	100	64.130	ENSIPUG00000009661	srbd1	100	64.793	Ictalurus_punctatus
ENSPLAG00000002141	si:ch211-117n7.8	98	52.443	ENSSTOG00000005898	SRBD1	98	52.443	Ictidomys_tridecemlineatus
ENSPLAG00000002141	si:ch211-117n7.8	98	50.396	ENSJJAG00000022244	Srbd1	98	50.396	Jaculus_jaculus
ENSPLAG00000002141	si:ch211-117n7.8	99	82.540	ENSKMAG00000003473	si:ch211-117n7.8	100	82.540	Kryptolebias_marmoratus
ENSPLAG00000002141	si:ch211-117n7.8	100	77.821	ENSLBEG00000027518	si:ch211-117n7.8	100	77.821	Labrus_bergylta
ENSPLAG00000002141	si:ch211-117n7.8	84	58.080	ENSLACG00000009790	SRBD1	99	58.080	Latimeria_chalumnae
ENSPLAG00000002141	si:ch211-117n7.8	92	64.051	ENSLOCG00000016360	si:ch211-117n7.8	99	61.637	Lepisosteus_oculatus
ENSPLAG00000002141	si:ch211-117n7.8	85	56.582	ENSMFAG00000042026	SRBD1	98	51.690	Macaca_fascicularis
ENSPLAG00000002141	si:ch211-117n7.8	85	56.582	ENSMMUG00000003490	SRBD1	98	51.590	Macaca_mulatta
ENSPLAG00000002141	si:ch211-117n7.8	85	55.196	ENSMNEG00000034701	SRBD1	98	50.497	Macaca_nemestrina
ENSPLAG00000002141	si:ch211-117n7.8	97	52.121	ENSMLEG00000000745	SRBD1	98	51.789	Mandrillus_leucophaeus
ENSPLAG00000002141	si:ch211-117n7.8	100	75.961	ENSMAMG00000021921	si:ch211-117n7.8	100	77.833	Mastacembelus_armatus
ENSPLAG00000002141	si:ch211-117n7.8	100	79.512	ENSMZEG00005027369	si:ch211-117n7.8	100	79.707	Maylandia_zebra
ENSPLAG00000002141	si:ch211-117n7.8	79	56.250	ENSMGAG00000010273	SRBD1	100	56.250	Meleagris_gallopavo
ENSPLAG00000002141	si:ch211-117n7.8	77	56.473	ENSMAUG00000013916	Srbd1	95	56.473	Mesocricetus_auratus
ENSPLAG00000002141	si:ch211-117n7.8	97	51.915	ENSMICG00000007835	SRBD1	99	51.022	Microcebus_murinus
ENSPLAG00000002141	si:ch211-117n7.8	99	50.493	ENSMOCG00000018716	Srbd1	99	50.493	Microtus_ochrogaster
ENSPLAG00000002141	si:ch211-117n7.8	97	75.281	ENSMMOG00000007507	si:ch211-117n7.8	100	75.281	Mola_mola
ENSPLAG00000002141	si:ch211-117n7.8	100	76.667	ENSMALG00000001562	si:ch211-117n7.8	100	76.765	Monopterus_albus
ENSPLAG00000002141	si:ch211-117n7.8	84	57.227	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.306	Mus_caroli
ENSPLAG00000002141	si:ch211-117n7.8	84	57.227	ENSMUSG00000024135	Srbd1	99	55.556	Mus_musculus
ENSPLAG00000002141	si:ch211-117n7.8	85	56.663	MGP_PahariEiJ_G0020924	Srbd1	86	56.663	Mus_pahari
ENSPLAG00000002141	si:ch211-117n7.8	84	57.227	MGP_SPRETEiJ_G0022850	Srbd1	85	57.227	Mus_spretus
ENSPLAG00000002141	si:ch211-117n7.8	93	53.388	ENSMLUG00000007039	SRBD1	98	52.178	Myotis_lucifugus
ENSPLAG00000002141	si:ch211-117n7.8	83	55.849	ENSNGAG00000011893	Srbd1	84	55.849	Nannospalax_galili
ENSPLAG00000002141	si:ch211-117n7.8	98	76.761	ENSNBRG00000012873	si:ch211-117n7.8	100	76.962	Neolamprologus_brichardi
ENSPLAG00000002141	si:ch211-117n7.8	85	56.236	ENSNLEG00000016877	SRBD1	98	51.142	Nomascus_leucogenys
ENSPLAG00000002141	si:ch211-117n7.8	94	53.033	ENSODEG00000012095	SRBD1	97	53.033	Octodon_degus
ENSPLAG00000002141	si:ch211-117n7.8	100	79.805	ENSONIG00000000945	si:ch211-117n7.8	100	84.588	Oreochromis_niloticus
ENSPLAG00000002141	si:ch211-117n7.8	93	53.479	ENSOCUG00000015385	SRBD1	95	53.790	Oryctolagus_cuniculus
ENSPLAG00000002141	si:ch211-117n7.8	100	73.190	ENSORLG00000004427	si:ch211-117n7.8	100	73.190	Oryzias_latipes
ENSPLAG00000002141	si:ch211-117n7.8	100	76.735	ENSORLG00020012792	si:ch211-117n7.8	100	76.735	Oryzias_latipes_hni
ENSPLAG00000002141	si:ch211-117n7.8	100	76.321	ENSORLG00015018598	si:ch211-117n7.8	100	76.321	Oryzias_latipes_hsok
ENSPLAG00000002141	si:ch211-117n7.8	99	75.692	ENSOMEG00000012229	si:ch211-117n7.8	99	79.545	Oryzias_melastigma
ENSPLAG00000002141	si:ch211-117n7.8	83	55.713	ENSOGAG00000001076	SRBD1	84	55.713	Otolemur_garnettii
ENSPLAG00000002141	si:ch211-117n7.8	83	53.054	ENSOARG00000005958	SRBD1	84	53.054	Ovis_aries
ENSPLAG00000002141	si:ch211-117n7.8	83	57.075	ENSPPAG00000038442	SRBD1	98	51.539	Pan_paniscus
ENSPLAG00000002141	si:ch211-117n7.8	83	56.958	ENSPPRG00000003449	SRBD1	98	51.434	Panthera_pardus
ENSPLAG00000002141	si:ch211-117n7.8	83	56.958	ENSPTIG00000012495	SRBD1	98	51.434	Panthera_tigris_altaica
ENSPLAG00000002141	si:ch211-117n7.8	83	57.075	ENSPTRG00000011889	SRBD1	98	51.539	Pan_troglodytes
ENSPLAG00000002141	si:ch211-117n7.8	97	51.717	ENSPANG00000008063	SRBD1	98	51.392	Papio_anubis
ENSPLAG00000002141	si:ch211-117n7.8	94	64.301	ENSPKIG00000021973	si:ch211-117n7.8	99	61.793	Paramormyrops_kingsleyae
ENSPLAG00000002141	si:ch211-117n7.8	83	58.205	ENSPSIG00000008992	SRBD1	100	51.613	Pelodiscus_sinensis
ENSPLAG00000002141	si:ch211-117n7.8	85	79.181	ENSPMGG00000013348	si:ch211-117n7.8	99	72.700	Periophthalmus_magnuspinnatus
ENSPLAG00000002141	si:ch211-117n7.8	98	50.242	ENSPEMG00000020684	Srbd1	99	50.242	Peromyscus_maniculatus_bairdii
ENSPLAG00000002141	si:ch211-117n7.8	100	99.202	ENSPFOG00000010650	si:ch211-117n7.8	100	99.202	Poecilia_formosa
ENSPLAG00000002141	si:ch211-117n7.8	100	99.002	ENSPMEG00000018537	si:ch211-117n7.8	100	99.002	Poecilia_mexicana
ENSPLAG00000002141	si:ch211-117n7.8	100	92.949	ENSPREG00000003258	si:ch211-117n7.8	100	92.949	Poecilia_reticulata
ENSPLAG00000002141	si:ch211-117n7.8	97	48.718	ENSPPYG00000012444	SRBD1	97	48.363	Pongo_abelii
ENSPLAG00000002141	si:ch211-117n7.8	75	52.632	ENSPCAG00000005629	SRBD1	80	52.632	Procavia_capensis
ENSPLAG00000002141	si:ch211-117n7.8	83	48.474	ENSPCOG00000017669	SRBD1	99	43.411	Propithecus_coquereli
ENSPLAG00000002141	si:ch211-117n7.8	83	50.648	ENSPVAG00000001782	SRBD1	98	45.887	Pteropus_vampyrus
ENSPLAG00000002141	si:ch211-117n7.8	97	74.949	ENSPNYG00000000508	si:ch211-117n7.8	100	75.153	Pundamilia_nyererei
ENSPLAG00000002141	si:ch211-117n7.8	94	68.168	ENSPNAG00000013492	SRBD1	97	67.039	Pygocentrus_nattereri
ENSPLAG00000002141	si:ch211-117n7.8	85	56.126	ENSRNOG00000014720	Srbd1	99	50.690	Rattus_norvegicus
ENSPLAG00000002141	si:ch211-117n7.8	97	52.020	ENSRBIG00000033486	SRBD1	98	51.590	Rhinopithecus_bieti
ENSPLAG00000002141	si:ch211-117n7.8	97	52.020	ENSRROG00000041599	SRBD1	98	51.590	Rhinopithecus_roxellana
ENSPLAG00000002141	si:ch211-117n7.8	83	56.958	ENSSBOG00000024982	SRBD1	98	50.945	Saimiri_boliviensis_boliviensis
ENSPLAG00000002141	si:ch211-117n7.8	86	67.474	ENSSFOG00015001128	si:ch211-117n7.8	94	67.474	Scleropages_formosus
ENSPLAG00000002141	si:ch211-117n7.8	100	77.193	ENSSMAG00000018256	si:ch211-117n7.8	100	77.193	Scophthalmus_maximus
ENSPLAG00000002141	si:ch211-117n7.8	93	80.374	ENSSLDG00000023189	si:ch211-117n7.8	99	78.989	Seriola_lalandi_dorsalis
ENSPLAG00000002141	si:ch211-117n7.8	93	50.366	ENSSARG00000009740	SRBD1	96	50.366	Sorex_araneus
ENSPLAG00000002141	si:ch211-117n7.8	85	58.947	ENSSPUG00000010475	SRBD1	99	55.769	Sphenodon_punctatus
ENSPLAG00000002141	si:ch211-117n7.8	92	79.979	ENSSPAG00000008092	-	99	76.313	Stegastes_partitus
ENSPLAG00000002141	si:ch211-117n7.8	83	57.479	ENSSSCG00000008445	SRBD1	98	51.076	Sus_scrofa
ENSPLAG00000002141	si:ch211-117n7.8	83	58.019	ENSTGUG00000003878	SRBD1	100	58.019	Taeniopygia_guttata
ENSPLAG00000002141	si:ch211-117n7.8	99	73.951	ENSTRUG00000007080	si:ch211-117n7.8	99	79.372	Takifugu_rubripes
ENSPLAG00000002141	si:ch211-117n7.8	98	72.673	ENSTNIG00000007464	si:ch211-117n7.8	98	72.673	Tetraodon_nigroviridis
ENSPLAG00000002141	si:ch211-117n7.8	64	80.851	ENSTBEG00000004556	SRBD1	69	80.851	Tupaia_belangeri
ENSPLAG00000002141	si:ch211-117n7.8	76	58.494	ENSTTRG00000011871	SRBD1	75	58.494	Tursiops_truncatus
ENSPLAG00000002141	si:ch211-117n7.8	83	57.715	ENSUAMG00000008126	SRBD1	97	53.986	Ursus_americanus
ENSPLAG00000002141	si:ch211-117n7.8	83	57.715	ENSUMAG00000012902	SRBD1	97	51.823	Ursus_maritimus
ENSPLAG00000002141	si:ch211-117n7.8	83	57.075	ENSVPAG00000006825	SRBD1	92	57.075	Vicugna_pacos
ENSPLAG00000002141	si:ch211-117n7.8	93	52.059	ENSVVUG00000005389	SRBD1	100	50.923	Vulpes_vulpes
ENSPLAG00000002141	si:ch211-117n7.8	98	45.873	ENSXETG00000002760	srbd1	99	46.065	Xenopus_tropicalis
ENSPLAG00000002141	si:ch211-117n7.8	100	95.010	ENSXMAG00000016861	si:ch211-117n7.8	100	95.010	Xiphophorus_maculatus