EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002200 (Gene tree)
Gene ID: 106939652
Gene Symbol: -
Alias: -
Full Name: nuclear assembly factor 1 ribonucleoprotein
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6743 bases
Position: chrKQ548222.1:53814-60556
Accession: 106939652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019782	Gar1	PF04410.14	2.9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015145	-	4067	XM_015022119	ENSPLAP00000019782	479 (aa)	XP_014877605	UPI00072E9182

Gene Model

Click here to download ENSPLAG00000002200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002200	-	65	61.491	ENSAPOG00000007663	-	95	55.012	Acanthochromis_polyacanthus
ENSPLAG00000002200	-	65	63.354	ENSAOCG00000003518	-	94	58.706	Amphiprion_ocellaris
ENSPLAG00000002200	-	68	61.357	ENSAPEG00000004453	-	94	62.564	Amphiprion_percula
ENSPLAG00000002200	-	93	52.878	ENSATEG00000003514	-	82	53.947	Anabas_testudineus
ENSPLAG00000002200	-	55	45.926	ENSANAG00000025253	NAF1	93	60.000	Aotus_nancymaae
ENSPLAG00000002200	-	80	56.188	ENSACLG00000017092	-	69	63.699	Astatotilapia_calliptera
ENSPLAG00000002200	-	57	43.590	ENSAMXG00000030034	naf1	62	40.426	Astyanax_mexicanus
ENSPLAG00000002200	-	54	42.049	ENSTSYG00000005946	NAF1	84	61.111	Carlito_syrichta
ENSPLAG00000002200	-	52	45.185	ENSCCAG00000030023	NAF1	95	60.000	Cebus_capucinus
ENSPLAG00000002200	-	86	45.853	ENSCSEG00000010914	-	54	55.294	Cynoglossus_semilaevis
ENSPLAG00000002200	-	61	67.687	ENSCVAG00000003483	-	89	67.007	Cyprinodon_variegatus
ENSPLAG00000002200	-	60	43.260	ENSDORG00000011327	Naf1	50	49.561	Dipodomys_ordii
ENSPLAG00000002200	-	52	44.906	ENSFCAG00000031652	NAF1	51	48.485	Felis_catus
ENSPLAG00000002200	-	86	69.048	ENSFHEG00000015835	-	96	69.787	Fundulus_heteroclitus
ENSPLAG00000002200	-	96	89.224	ENSGAFG00000017883	-	93	90.302	Gambusia_affinis
ENSPLAG00000002200	-	52	46.792	ENSJJAG00000012147	-	62	51.570	Jaculus_jaculus
ENSPLAG00000002200	-	95	52.459	ENSKMAG00000005434	-	97	51.619	Kryptolebias_marmoratus
ENSPLAG00000002200	-	71	58.287	ENSLBEG00000020414	-	81	61.272	Labrus_bergylta
ENSPLAG00000002200	-	55	66.667	ENSMAMG00000003269	-	97	66.667	Mastacembelus_armatus
ENSPLAG00000002200	-	80	55.224	ENSMZEG00005005830	-	71	62.329	Maylandia_zebra
ENSPLAG00000002200	-	53	44.151	ENSMGAG00000002133	NAF1	69	47.727	Meleagris_gallopavo
ENSPLAG00000002200	-	58	40.541	ENSMICG00000038661	NAF1	84	58.333	Microcebus_murinus
ENSPLAG00000002200	-	58	44.816	ENSMMOG00000016895	-	57	45.545	Mola_mola
ENSPLAG00000002200	-	78	57.035	ENSMALG00000018482	-	87	55.582	Monopterus_albus
ENSPLAG00000002200	-	55	46.014	ENSNGAG00000023833	Naf1	50	49.345	Nannospalax_galili
ENSPLAG00000002200	-	55	45.487	ENSODEG00000006528	NAF1	74	47.297	Octodon_degus
ENSPLAG00000002200	-	56	45.683	ENSOCUG00000000485	NAF1	54	48.289	Oryctolagus_cuniculus
ENSPLAG00000002200	-	75	53.109	ENSORLG00000002191	-	61	53.235	Oryzias_latipes
ENSPLAG00000002200	-	75	52.850	ENSORLG00020013478	-	61	53.235	Oryzias_latipes_hni
ENSPLAG00000002200	-	75	52.850	ENSORLG00015012985	-	60	52.941	Oryzias_latipes_hsok
ENSPLAG00000002200	-	64	56.918	ENSOMEG00000021322	-	67	53.959	Oryzias_melastigma
ENSPLAG00000002200	-	52	45.149	ENSPEMG00000014321	Naf1	58	50.224	Peromyscus_maniculatus_bairdii
ENSPLAG00000002200	-	100	99.582	ENSPFOG00000010705	-	100	99.582	Poecilia_formosa
ENSPLAG00000002200	-	100	97.113	ENSPMEG00000004437	-	100	97.113	Poecilia_mexicana
ENSPLAG00000002200	-	96	92.241	ENSPREG00000022551	-	96	92.241	Poecilia_reticulata
ENSPLAG00000002200	-	80	49.127	ENSPNYG00000021456	-	51	75.316	Pundamilia_nyererei
ENSPLAG00000002200	-	52	43.651	ENSPNAG00000001219	naf1	55	48.523	Pygocentrus_nattereri
ENSPLAG00000002200	-	63	58.675	ENSSMAG00000015529	-	64	63.985	Scophthalmus_maximus
ENSPLAG00000002200	-	63	65.723	ENSSDUG00000005987	-	95	59.352	Seriola_dumerili
ENSPLAG00000002200	-	65	49.734	ENSSLDG00000019761	-	95	48.552	Seriola_lalandi_dorsalis
ENSPLAG00000002200	-	63	42.089	ENSSPUG00000004087	NAF1	61	57.955	Sphenodon_punctatus
ENSPLAG00000002200	-	59	59.582	ENSTRUG00000011908	-	70	61.417	Takifugu_rubripes
ENSPLAG00000002200	-	53	45.055	ENSVVUG00000022303	NAF1	61	48.684	Vulpes_vulpes
ENSPLAG00000002200	-	61	82.935	ENSXCOG00000013058	-	91	84.642	Xiphophorus_couchianus
ENSPLAG00000002200	-	96	89.914	ENSXMAG00000011494	-	96	90.987	Xiphophorus_maculatus