EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002290 (Gene tree)
Gene ID: -
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4723 bases
Position: chrLMXD01032839.1:61968-66690
Accession: 106939647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001281	zf-U11-48K	PF05253.12	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000015014	-	867	XM_015022114	ENSPLAP00000001281	288 (aa)	XP_014877600	-

Gene Model

Click here to download ENSPLAG00000002290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002290	snrnp48	77	51.528	ENSG00000168566	SNRNP48	77	46.491	Homo_sapiens
ENSPLAG00000002290	snrnp48	82	80.085	ENSAPOG00000021430	snrnp48	70	80.085	Acanthochromis_polyacanthus
ENSPLAG00000002290	snrnp48	76	49.778	ENSAMEG00000017349	SNRNP48	64	49.778	Ailuropoda_melanoleuca
ENSPLAG00000002290	snrnp48	99	63.380	ENSACIG00000002032	snrnp48	70	72.034	Amphilophus_citrinellus
ENSPLAG00000002290	snrnp48	82	78.390	ENSAOCG00000010562	snrnp48	70	78.390	Amphiprion_ocellaris
ENSPLAG00000002290	snrnp48	82	78.390	ENSAPEG00000003231	snrnp48	70	78.390	Amphiprion_percula
ENSPLAG00000002290	snrnp48	91	75.479	ENSATEG00000020210	snrnp48	69	81.466	Anabas_testudineus
ENSPLAG00000002290	snrnp48	63	54.891	ENSACAG00000002811	SNRNP48	56	54.891	Anolis_carolinensis
ENSPLAG00000002290	snrnp48	77	51.965	ENSANAG00000033538	SNRNP48	67	52.402	Aotus_nancymaae
ENSPLAG00000002290	snrnp48	91	59.091	ENSAMXG00000015309	snrnp48	76	60.606	Astyanax_mexicanus
ENSPLAG00000002290	snrnp48	75	48.000	ENSBTAG00000001123	SNRNP48	66	48.684	Bos_taurus
ENSPLAG00000002290	snrnp48	77	51.965	ENSCJAG00000021330	SNRNP48	67	52.402	Callithrix_jacchus
ENSPLAG00000002290	snrnp48	76	49.558	ENSCAFG00000009574	SNRNP48	55	49.558	Canis_familiaris
ENSPLAG00000002290	snrnp48	76	49.558	ENSCAFG00020013203	SNRNP48	66	49.558	Canis_lupus_dingo
ENSPLAG00000002290	snrnp48	75	48.889	ENSCHIG00000015216	SNRNP48	66	49.561	Capra_hircus
ENSPLAG00000002290	snrnp48	77	51.092	ENSTSYG00000000698	SNRNP48	67	51.092	Carlito_syrichta
ENSPLAG00000002290	snrnp48	69	50.725	ENSCAPG00000006768	SNRNP48	67	50.725	Cavia_aperea
ENSPLAG00000002290	snrnp48	77	51.528	ENSCPOG00000007910	SNRNP48	67	51.528	Cavia_porcellus
ENSPLAG00000002290	snrnp48	79	50.000	ENSCCAG00000035652	SNRNP48	68	50.427	Cebus_capucinus
ENSPLAG00000002290	snrnp48	77	51.092	ENSCATG00000033947	SNRNP48	79	46.491	Cercocebus_atys
ENSPLAG00000002290	snrnp48	79	50.427	ENSCLAG00000003765	SNRNP48	68	50.427	Chinchilla_lanigera
ENSPLAG00000002290	snrnp48	77	51.965	ENSCSAG00000007409	SNRNP48	67	51.965	Chlorocebus_sabaeus
ENSPLAG00000002290	snrnp48	65	52.632	ENSCPBG00000019146	SNRNP48	59	52.632	Chrysemys_picta_bellii
ENSPLAG00000002290	snrnp48	77	51.965	ENSCANG00000030017	SNRNP48	67	52.402	Colobus_angolensis_palliatus
ENSPLAG00000002290	snrnp48	73	44.444	ENSCGRG00001008805	-	67	44.444	Cricetulus_griseus_chok1gshd
ENSPLAG00000002290	snrnp48	79	49.573	ENSCGRG00001001076	-	95	32.509	Cricetulus_griseus_chok1gshd
ENSPLAG00000002290	snrnp48	79	49.573	ENSCGRG00000007781	Snrnp48	95	32.509	Cricetulus_griseus_crigri
ENSPLAG00000002290	snrnp48	78	70.485	ENSCSEG00000000722	snrnp48	64	70.485	Cynoglossus_semilaevis
ENSPLAG00000002290	snrnp48	97	75.714	ENSCVAG00000019829	snrnp48	70	77.491	Cyprinodon_variegatus
ENSPLAG00000002290	snrnp48	88	55.686	ENSDARG00000039989	snrnp48	71	55.686	Danio_rerio
ENSPLAG00000002290	snrnp48	76	49.780	ENSDNOG00000014978	SNRNP48	81	44.643	Dasypus_novemcinctus
ENSPLAG00000002290	snrnp48	77	50.000	ENSDORG00000015140	Snrnp48	67	50.000	Dipodomys_ordii
ENSPLAG00000002290	snrnp48	77	50.655	ENSEASG00005012021	SNRNP48	67	50.655	Equus_asinus_asinus
ENSPLAG00000002290	snrnp48	77	50.655	ENSECAG00000026937	SNRNP48	67	50.655	Equus_caballus
ENSPLAG00000002290	snrnp48	63	40.741	ENSEEUG00000015437	SNRNP48	55	40.741	Erinaceus_europaeus
ENSPLAG00000002290	snrnp48	82	64.286	ENSELUG00000009766	snrnp48	67	64.286	Esox_lucius
ENSPLAG00000002290	snrnp48	76	50.000	ENSFCAG00000018853	SNRNP48	66	50.000	Felis_catus
ENSPLAG00000002290	snrnp48	63	56.757	ENSFALG00000007797	SNRNP48	58	56.757	Ficedula_albicollis
ENSPLAG00000002290	snrnp48	77	51.092	ENSFDAG00000009231	SNRNP48	67	51.092	Fukomys_damarensis
ENSPLAG00000002290	snrnp48	64	92.391	ENSFHEG00000014647	snrnp48	64	92.391	Fundulus_heteroclitus
ENSPLAG00000002290	snrnp48	80	71.739	ENSGMOG00000018599	-	71	71.739	Gadus_morhua
ENSPLAG00000002290	snrnp48	63	57.297	ENSGALG00000013005	SNRNP48	61	57.297	Gallus_gallus
ENSPLAG00000002290	snrnp48	96	82.699	ENSGAFG00000021639	snrnp48	76	86.397	Gambusia_affinis
ENSPLAG00000002290	snrnp48	80	77.489	ENSGACG00000017756	-	69	77.489	Gasterosteus_aculeatus
ENSPLAG00000002290	snrnp48	66	51.562	ENSGAGG00000000865	SNRNP48	62	51.562	Gopherus_agassizii
ENSPLAG00000002290	snrnp48	77	51.965	ENSGGOG00000013220	SNRNP48	67	52.402	Gorilla_gorilla
ENSPLAG00000002290	snrnp48	82	78.390	ENSHBUG00000017066	snrnp48	69	78.390	Haplochromis_burtoni
ENSPLAG00000002290	snrnp48	77	50.218	ENSHGLG00000015241	SNRNP48	67	50.218	Heterocephalus_glaber_female
ENSPLAG00000002290	snrnp48	77	50.218	ENSHGLG00100010027	SNRNP48	67	50.218	Heterocephalus_glaber_male
ENSPLAG00000002290	snrnp48	82	71.730	ENSHCOG00000014066	snrnp48	69	71.730	Hippocampus_comes
ENSPLAG00000002290	snrnp48	79	50.000	ENSSTOG00000014635	SNRNP48	68	50.000	Ictidomys_tridecemlineatus
ENSPLAG00000002290	snrnp48	76	51.111	ENSJJAG00000011495	Snrnp48	66	51.111	Jaculus_jaculus
ENSPLAG00000002290	snrnp48	82	83.051	ENSKMAG00000016514	snrnp48	69	83.051	Kryptolebias_marmoratus
ENSPLAG00000002290	snrnp48	82	78.059	ENSLBEG00000026249	snrnp48	69	78.059	Labrus_bergylta
ENSPLAG00000002290	snrnp48	83	53.061	ENSLACG00000003958	SNRNP48	72	53.061	Latimeria_chalumnae
ENSPLAG00000002290	snrnp48	90	58.238	ENSLOCG00000004187	snrnp48	74	58.238	Lepisosteus_oculatus
ENSPLAG00000002290	snrnp48	77	50.870	ENSLAFG00000011152	SNRNP48	67	51.304	Loxodonta_africana
ENSPLAG00000002290	snrnp48	77	51.965	ENSMFAG00000045216	SNRNP48	79	47.368	Macaca_fascicularis
ENSPLAG00000002290	snrnp48	77	51.965	ENSMMUG00000014785	SNRNP48	67	52.402	Macaca_mulatta
ENSPLAG00000002290	snrnp48	77	52.402	ENSMNEG00000042269	SNRNP48	67	52.838	Macaca_nemestrina
ENSPLAG00000002290	snrnp48	77	51.965	ENSMLEG00000034004	SNRNP48	79	47.368	Mandrillus_leucophaeus
ENSPLAG00000002290	snrnp48	82	76.793	ENSMAMG00000018673	snrnp48	62	76.793	Mastacembelus_armatus
ENSPLAG00000002290	snrnp48	63	57.838	ENSMGAG00000006037	SNRNP48	62	57.838	Meleagris_gallopavo
ENSPLAG00000002290	snrnp48	81	48.536	ENSMAUG00000011944	Snrnp48	71	48.536	Mesocricetus_auratus
ENSPLAG00000002290	snrnp48	77	50.435	ENSMICG00000012497	SNRNP48	67	50.870	Microcebus_murinus
ENSPLAG00000002290	snrnp48	79	49.787	ENSMOCG00000015555	Snrnp48	95	33.569	Microtus_ochrogaster
ENSPLAG00000002290	snrnp48	66	80.105	ENSMMOG00000003072	-	60	80.105	Mola_mola
ENSPLAG00000002290	snrnp48	81	48.347	ENSMODG00000009996	SNRNP48	64	48.347	Monodelphis_domestica
ENSPLAG00000002290	snrnp48	95	72.464	ENSMALG00000005725	snrnp48	76	73.333	Monopterus_albus
ENSPLAG00000002290	snrnp48	79	49.145	MGP_CAROLIEiJ_G0018441	Snrnp48	69	49.145	Mus_caroli
ENSPLAG00000002290	snrnp48	79	49.145	ENSMUSG00000021431	Snrnp48	69	49.145	Mus_musculus
ENSPLAG00000002290	snrnp48	79	49.573	MGP_PahariEiJ_G0019509	Snrnp48	69	49.573	Mus_pahari
ENSPLAG00000002290	snrnp48	79	49.145	MGP_SPRETEiJ_G0019321	Snrnp48	69	49.145	Mus_spretus
ENSPLAG00000002290	snrnp48	77	52.609	ENSNGAG00000004849	Snrnp48	67	52.609	Nannospalax_galili
ENSPLAG00000002290	snrnp48	82	77.966	ENSNBRG00000012127	snrnp48	69	77.966	Neolamprologus_brichardi
ENSPLAG00000002290	snrnp48	77	51.965	ENSNLEG00000011667	SNRNP48	67	52.402	Nomascus_leucogenys
ENSPLAG00000002290	snrnp48	77	50.220	ENSOPRG00000015471	SNRNP48	70	50.220	Ochotona_princeps
ENSPLAG00000002290	snrnp48	82	78.390	ENSONIG00000001520	snrnp48	69	78.390	Oreochromis_niloticus
ENSPLAG00000002290	snrnp48	65	36.842	ENSOANG00000019888	-	99	37.321	Ornithorhynchus_anatinus
ENSPLAG00000002290	snrnp48	75	50.673	ENSOCUG00000005168	SNRNP48	76	50.000	Oryctolagus_cuniculus
ENSPLAG00000002290	snrnp48	82	75.847	ENSORLG00000015654	snrnp48	68	75.847	Oryzias_latipes
ENSPLAG00000002290	snrnp48	82	75.000	ENSORLG00020015976	snrnp48	58	75.000	Oryzias_latipes_hni
ENSPLAG00000002290	snrnp48	82	74.576	ENSORLG00015022379	snrnp48	59	74.576	Oryzias_latipes_hsok
ENSPLAG00000002290	snrnp48	82	76.271	ENSOMEG00000022007	snrnp48	69	76.271	Oryzias_melastigma
ENSPLAG00000002290	snrnp48	77	50.870	ENSOGAG00000005275	SNRNP48	69	50.870	Otolemur_garnettii
ENSPLAG00000002290	snrnp48	63	54.054	ENSOARG00000017319	SNRNP48	63	54.054	Ovis_aries
ENSPLAG00000002290	snrnp48	77	51.965	ENSPPAG00000032873	SNRNP48	67	52.402	Pan_paniscus
ENSPLAG00000002290	snrnp48	77	50.218	ENSPPRG00000004283	SNRNP48	67	50.218	Panthera_pardus
ENSPLAG00000002290	snrnp48	63	53.804	ENSPTIG00000013502	SNRNP48	63	53.804	Panthera_tigris_altaica
ENSPLAG00000002290	snrnp48	77	51.965	ENSPTRG00000017703	SNRNP48	67	52.402	Pan_troglodytes
ENSPLAG00000002290	snrnp48	77	51.965	ENSPANG00000000771	SNRNP48	79	47.368	Papio_anubis
ENSPLAG00000002290	snrnp48	89	58.915	ENSPKIG00000013703	snrnp48	52	58.915	Paramormyrops_kingsleyae
ENSPLAG00000002290	snrnp48	63	53.476	ENSPSIG00000002213	SNRNP48	58	53.476	Pelodiscus_sinensis
ENSPLAG00000002290	snrnp48	98	58.621	ENSPMGG00000008120	snrnp48	85	65.164	Periophthalmus_magnuspinnatus
ENSPLAG00000002290	snrnp48	79	50.427	ENSPEMG00000008872	Snrnp48	69	50.427	Peromyscus_maniculatus_bairdii
ENSPLAG00000002290	snrnp48	96	85.017	ENSPFOG00000003578	snrnp48	69	99.576	Poecilia_formosa
ENSPLAG00000002290	snrnp48	96	84.321	ENSPMEG00000018033	snrnp48	69	98.729	Poecilia_mexicana
ENSPLAG00000002290	snrnp48	82	98.305	ENSPREG00000018541	snrnp48	69	98.305	Poecilia_reticulata
ENSPLAG00000002290	snrnp48	77	51.965	ENSPPYG00000016209	SNRNP48	67	52.402	Pongo_abelii
ENSPLAG00000002290	snrnp48	64	43.229	ENSPCAG00000011991	SNRNP48	77	42.308	Procavia_capensis
ENSPLAG00000002290	snrnp48	79	48.498	ENSPVAG00000002854	SNRNP48	68	48.927	Pteropus_vampyrus
ENSPLAG00000002290	snrnp48	82	78.390	ENSPNYG00000015399	snrnp48	76	78.390	Pundamilia_nyererei
ENSPLAG00000002290	snrnp48	79	50.000	ENSRNOG00000013756	Snrnp48	69	50.000	Rattus_norvegicus
ENSPLAG00000002290	snrnp48	77	51.965	ENSRBIG00000043856	SNRNP48	79	47.368	Rhinopithecus_bieti
ENSPLAG00000002290	snrnp48	77	51.965	ENSRROG00000043229	SNRNP48	67	52.402	Rhinopithecus_roxellana
ENSPLAG00000002290	snrnp48	77	52.402	ENSSBOG00000019486	SNRNP48	67	52.838	Saimiri_boliviensis_boliviensis
ENSPLAG00000002290	snrnp48	79	48.945	ENSSHAG00000014483	SNRNP48	68	48.945	Sarcophilus_harrisii
ENSPLAG00000002290	snrnp48	89	58.175	ENSSFOG00015006610	snrnp48	59	58.175	Scleropages_formosus
ENSPLAG00000002290	snrnp48	82	76.793	ENSSDUG00000014953	snrnp48	69	76.793	Seriola_dumerili
ENSPLAG00000002290	snrnp48	92	71.269	ENSSLDG00000005989	snrnp48	70	76.569	Seriola_lalandi_dorsalis
ENSPLAG00000002290	snrnp48	65	53.927	ENSSPUG00000006257	SNRNP48	54	53.927	Sphenodon_punctatus
ENSPLAG00000002290	snrnp48	82	81.356	ENSSPAG00000006454	snrnp48	70	81.356	Stegastes_partitus
ENSPLAG00000002290	snrnp48	66	54.124	ENSTGUG00000007575	SNRNP48	62	54.639	Taeniopygia_guttata
ENSPLAG00000002290	snrnp48	82	71.849	ENSTRUG00000007031	snrnp48	70	71.849	Takifugu_rubripes
ENSPLAG00000002290	snrnp48	82	71.429	ENSTNIG00000012977	-	72	71.429	Tetraodon_nigroviridis
ENSPLAG00000002290	snrnp48	79	48.291	ENSTBEG00000015620	SNRNP48	69	48.291	Tupaia_belangeri
ENSPLAG00000002290	snrnp48	75	48.879	ENSTTRG00000016715	SNRNP48	66	49.115	Tursiops_truncatus
ENSPLAG00000002290	snrnp48	76	49.778	ENSUAMG00000003690	SNRNP48	66	49.778	Ursus_americanus
ENSPLAG00000002290	snrnp48	63	53.514	ENSVPAG00000003557	SNRNP48	63	53.514	Vicugna_pacos
ENSPLAG00000002290	snrnp48	76	49.558	ENSVVUG00000004996	SNRNP48	66	49.558	Vulpes_vulpes
ENSPLAG00000002290	snrnp48	76	51.121	ENSXETG00000020447	snrnp48	65	51.121	Xenopus_tropicalis
ENSPLAG00000002290	snrnp48	94	78.176	ENSXCOG00000004478	snrnp48	95	78.176	Xiphophorus_couchianus
ENSPLAG00000002290	snrnp48	82	95.763	ENSXMAG00000013595	snrnp48	69	95.763	Xiphophorus_maculatus