EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002303 (Gene tree)
Gene ID: 106937451
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein MEX3B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 11040 bases
Position: chrKQ545395.1:99122-110161
Accession: 106937451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019849	KH_1	PF00013.29	7.8e-26	1	2
ENSPLAP00000019849	KH_1	PF00013.29	7.8e-26	2	2
ENSPLAP00000001292	KH_1	PF00013.29	1.6e-25	1	2
ENSPLAP00000001292	KH_1	PF00013.29	1.6e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014995	-	6324	XM_015018980	ENSPLAP00000001292	680 (aa)	XP_014874466	UPI00072DC551
ENSPLAT00000015010	-	1542	-	ENSPLAP00000019849	513 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000002303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002303	-	92	47.870	ENSPLAG00000018945	MEX3D	78	71.681

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002303	-	59	68.773	ENSG00000183496	MEX3B	55	69.742	Homo_sapiens
ENSPLAG00000002303	-	88	55.819	ENSAPOG00000006457	mex3b	97	52.826	Acanthochromis_polyacanthus
ENSPLAG00000002303	-	99	83.117	ENSAPOG00000024248	-	100	83.405	Acanthochromis_polyacanthus
ENSPLAG00000002303	-	54	65.000	ENSAMEG00000006037	MEX3B	54	68.100	Ailuropoda_melanoleuca
ENSPLAG00000002303	-	88	55.724	ENSACIG00000017783	mex3b	90	52.174	Amphilophus_citrinellus
ENSPLAG00000002303	-	96	70.200	ENSACIG00000005655	-	95	67.372	Amphilophus_citrinellus
ENSPLAG00000002303	-	99	82.973	ENSAOCG00000021347	-	100	83.550	Amphiprion_ocellaris
ENSPLAG00000002303	-	94	52.429	ENSAOCG00000023903	mex3b	91	51.120	Amphiprion_ocellaris
ENSPLAG00000002303	-	99	82.828	ENSAPEG00000003579	-	100	83.405	Amphiprion_percula
ENSPLAG00000002303	-	94	52.834	ENSAPEG00000000263	mex3b	91	51.120	Amphiprion_percula
ENSPLAG00000002303	-	88	54.043	ENSATEG00000012352	mex3b	91	50.462	Anabas_testudineus
ENSPLAG00000002303	-	99	76.301	ENSATEG00000015187	-	100	77.168	Anabas_testudineus
ENSPLAG00000002303	-	58	68.050	ENSACAG00000011072	MEX3B	50	79.444	Anolis_carolinensis
ENSPLAG00000002303	-	99	78.120	ENSACLG00000017634	-	100	79.148	Astatotilapia_calliptera
ENSPLAG00000002303	-	88	52.652	ENSACLG00000025776	mex3b	91	50.654	Astatotilapia_calliptera
ENSPLAG00000002303	-	88	53.955	ENSAMXG00000033615	mex3b	90	51.515	Astyanax_mexicanus
ENSPLAG00000002303	-	59	68.401	ENSBTAG00000052904	MEX3B	54	69.373	Bos_taurus
ENSPLAG00000002303	-	59	66.071	ENSCJAG00000008043	MEX3B	56	67.021	Callithrix_jacchus
ENSPLAG00000002303	-	59	68.401	ENSCHIG00000019863	MEX3B	54	69.373	Capra_hircus
ENSPLAG00000002303	-	59	68.773	ENSCATG00000030784	MEX3B	55	69.742	Cercocebus_atys
ENSPLAG00000002303	-	59	68.773	ENSCSAG00000015153	MEX3B	55	69.742	Chlorocebus_sabaeus
ENSPLAG00000002303	-	88	51.491	ENSCPBG00000007809	MEX3B	89	52.485	Chrysemys_picta_bellii
ENSPLAG00000002303	-	59	68.773	ENSCANG00000034524	MEX3B	71	69.742	Colobus_angolensis_palliatus
ENSPLAG00000002303	-	59	68.773	ENSCGRG00001016198	Mex3b	55	69.742	Cricetulus_griseus_chok1gshd
ENSPLAG00000002303	-	56	66.529	ENSCGRG00000018461	Mex3b	60	67.623	Cricetulus_griseus_crigri
ENSPLAG00000002303	-	99	65.226	ENSCSEG00000011533	-	99	64.388	Cynoglossus_semilaevis
ENSPLAG00000002303	-	93	50.000	ENSCSEG00000005852	mex3b	89	51.753	Cynoglossus_semilaevis
ENSPLAG00000002303	-	87	74.752	ENSCSEG00000006809	-	90	74.542	Cynoglossus_semilaevis
ENSPLAG00000002303	-	100	88.840	ENSCVAG00000006043	-	100	88.399	Cyprinodon_variegatus
ENSPLAG00000002303	-	88	55.000	ENSDARG00000058369	mex3b	90	54.125	Danio_rerio
ENSPLAG00000002303	-	59	68.519	ENSDNOG00000043628	MEX3B	56	69.485	Dasypus_novemcinctus
ENSPLAG00000002303	-	74	73.846	ENSEBUG00000013015	mex3b	68	74.031	Eptatretus_burgeri
ENSPLAG00000002303	-	88	51.674	ENSEBUG00000007080	mex3b	89	58.309	Eptatretus_burgeri
ENSPLAG00000002303	-	59	64.846	ENSECAG00000013497	MEX3B	57	64.505	Equus_caballus
ENSPLAG00000002303	-	59	71.536	ENSELUG00000002503	mex3b	91	49.434	Esox_lucius
ENSPLAG00000002303	-	59	71.212	ENSFALG00000011102	MEX3B	54	69.318	Ficedula_albicollis
ENSPLAG00000002303	-	59	69.145	ENSFDAG00000018452	MEX3B	79	70.111	Fukomys_damarensis
ENSPLAG00000002303	-	99	88.613	ENSFHEG00000022740	-	100	89.635	Fundulus_heteroclitus
ENSPLAG00000002303	-	88	68.944	ENSGMOG00000005826	-	100	69.291	Gadus_morhua
ENSPLAG00000002303	-	75	71.483	ENSGALG00000032984	MEX3B	95	49.723	Gallus_gallus
ENSPLAG00000002303	-	94	97.966	ENSGAFG00000013694	-	98	97.966	Gambusia_affinis
ENSPLAG00000002303	-	88	70.703	ENSGACG00000007490	-	100	72.285	Gasterosteus_aculeatus
ENSPLAG00000002303	-	88	53.416	ENSGAGG00000022839	MEX3B	89	54.658	Gopherus_agassizii
ENSPLAG00000002303	-	59	68.773	ENSGGOG00000000597	MEX3B	56	69.742	Gorilla_gorilla
ENSPLAG00000002303	-	99	78.363	ENSHBUG00000010552	-	100	79.386	Haplochromis_burtoni
ENSPLAG00000002303	-	88	52.456	ENSHBUG00000022683	mex3b	91	50.467	Haplochromis_burtoni
ENSPLAG00000002303	-	59	69.145	ENSHGLG00000012504	MEX3B	55	70.111	Heterocephalus_glaber_female
ENSPLAG00000002303	-	59	69.145	ENSHGLG00100008208	MEX3B	58	70.111	Heterocephalus_glaber_male
ENSPLAG00000002303	-	99	67.244	ENSHCOG00000010812	-	100	67.244	Hippocampus_comes
ENSPLAG00000002303	-	88	52.708	ENSHCOG00000007290	mex3b	63	71.591	Hippocampus_comes
ENSPLAG00000002303	-	88	51.004	ENSIPUG00000023356	mex3b	90	51.731	Ictalurus_punctatus
ENSPLAG00000002303	-	59	68.773	ENSSTOG00000006738	MEX3B	52	69.742	Ictidomys_tridecemlineatus
ENSPLAG00000002303	-	59	68.773	ENSJJAG00000015411	Mex3b	54	69.742	Jaculus_jaculus
ENSPLAG00000002303	-	100	83.041	ENSKMAG00000021181	MEX3B	100	83.866	Kryptolebias_marmoratus
ENSPLAG00000002303	-	87	75.122	ENSLBEG00000007607	-	92	75.570	Labrus_bergylta
ENSPLAG00000002303	-	94	50.000	ENSLBEG00000015131	mex3b	82	63.376	Labrus_bergylta
ENSPLAG00000002303	-	88	51.521	ENSLACG00000015887	MEX3B	90	50.672	Latimeria_chalumnae
ENSPLAG00000002303	-	88	52.381	ENSLOCG00000012858	mex3b	91	50.980	Lepisosteus_oculatus
ENSPLAG00000002303	-	75	63.889	ENSLAFG00000006027	MEX3B	95	83.838	Loxodonta_africana
ENSPLAG00000002303	-	66	63.696	ENSMFAG00000037608	MEX3B	55	69.742	Macaca_fascicularis
ENSPLAG00000002303	-	66	61.465	ENSMMUG00000018639	MEX3B	56	67.021	Macaca_mulatta
ENSPLAG00000002303	-	66	63.696	ENSMNEG00000043420	MEX3B	55	69.742	Macaca_nemestrina
ENSPLAG00000002303	-	88	50.772	ENSMLEG00000037832	MEX3B	50	68.817	Mandrillus_leucophaeus
ENSPLAG00000002303	-	99	77.574	ENSMAMG00000001370	-	100	78.843	Mastacembelus_armatus
ENSPLAG00000002303	-	88	54.545	ENSMAMG00000011325	mex3b	91	51.796	Mastacembelus_armatus
ENSPLAG00000002303	-	99	78.120	ENSMZEG00005004908	-	100	79.148	Maylandia_zebra
ENSPLAG00000002303	-	88	52.456	ENSMZEG00005003082	mex3b	91	50.467	Maylandia_zebra
ENSPLAG00000002303	-	59	68.773	ENSMAUG00000001211	Mex3b	55	69.742	Mesocricetus_auratus
ENSPLAG00000002303	-	59	68.773	ENSMOCG00000019726	Mex3b	55	69.742	Microtus_ochrogaster
ENSPLAG00000002303	-	99	77.059	ENSMMOG00000000120	-	99	77.193	Mola_mola
ENSPLAG00000002303	-	85	52.352	ENSMMOG00000015373	mex3b	88	51.738	Mola_mola
ENSPLAG00000002303	-	63	84.772	ENSMODG00000019387	MEX3B	68	69.231	Monodelphis_domestica
ENSPLAG00000002303	-	88	51.889	ENSMALG00000010929	mex3b	70	48.976	Monopterus_albus
ENSPLAG00000002303	-	86	78.571	ENSMALG00000009589	-	92	79.636	Monopterus_albus
ENSPLAG00000002303	-	81	68.773	MGP_CAROLIEiJ_G0029937	Mex3b	69	69.742	Mus_caroli
ENSPLAG00000002303	-	81	68.773	ENSMUSG00000057706	Mex3b	69	69.742	Mus_musculus
ENSPLAG00000002303	-	81	68.773	MGP_PahariEiJ_G0013158	Mex3b	69	69.742	Mus_pahari
ENSPLAG00000002303	-	81	68.401	MGP_SPRETEiJ_G0031039	Mex3b	69	69.373	Mus_spretus
ENSPLAG00000002303	-	59	68.773	ENSNGAG00000010102	Mex3b	55	69.742	Nannospalax_galili
ENSPLAG00000002303	-	98	71.923	ENSNBRG00000012485	-	97	73.592	Neolamprologus_brichardi
ENSPLAG00000002303	-	88	52.456	ENSNBRG00000000526	mex3b	89	50.467	Neolamprologus_brichardi
ENSPLAG00000002303	-	59	63.704	ENSNLEG00000036285	MEX3B	55	64.706	Nomascus_leucogenys
ENSPLAG00000002303	-	50	80.476	ENSOPRG00000009604	MEX3B	62	67.014	Ochotona_princeps
ENSPLAG00000002303	-	98	76.527	ENSONIG00000015037	-	99	77.698	Oreochromis_niloticus
ENSPLAG00000002303	-	88	52.456	ENSONIG00000003391	mex3b	91	50.467	Oreochromis_niloticus
ENSPLAG00000002303	-	88	48.842	ENSOCUG00000011603	MEX3B	91	48.837	Oryctolagus_cuniculus
ENSPLAG00000002303	-	99	79.740	ENSORLG00000004985	-	100	79.450	Oryzias_latipes
ENSPLAG00000002303	-	99	79.942	ENSORLG00020020174	-	100	80.233	Oryzias_latipes_hni
ENSPLAG00000002303	-	99	80.087	ENSORLG00015008649	-	100	80.378	Oryzias_latipes_hsok
ENSPLAG00000002303	-	99	81.541	ENSOMEG00000023339	-	100	81.831	Oryzias_melastigma
ENSPLAG00000002303	-	59	68.773	ENSPPAG00000020407	MEX3B	56	69.742	Pan_paniscus
ENSPLAG00000002303	-	59	68.773	ENSPTRG00000007373	MEX3B	55	69.742	Pan_troglodytes
ENSPLAG00000002303	-	59	68.773	ENSPANG00000015634	MEX3B	56	69.742	Papio_anubis
ENSPLAG00000002303	-	88	53.043	ENSPKIG00000019969	-	95	54.066	Paramormyrops_kingsleyae
ENSPLAG00000002303	-	88	52.964	ENSPKIG00000018385	mex3b	93	51.550	Paramormyrops_kingsleyae
ENSPLAG00000002303	-	88	54.037	ENSPMGG00000015808	mex3b	56	66.113	Periophthalmus_magnuspinnatus
ENSPLAG00000002303	-	97	71.571	ENSPMGG00000017559	-	97	65.523	Periophthalmus_magnuspinnatus
ENSPLAG00000002303	-	88	42.023	ENSPMAG00000000125	mex3b	99	41.176	Petromyzon_marinus
ENSPLAG00000002303	-	100	99.706	ENSPFOG00000018999	-	100	99.706	Poecilia_formosa
ENSPLAG00000002303	-	100	99.265	ENSPMEG00000006448	-	100	99.265	Poecilia_mexicana
ENSPLAG00000002303	-	100	98.091	ENSPREG00000018559	-	100	98.091	Poecilia_reticulata
ENSPLAG00000002303	-	99	78.216	ENSPNYG00000010418	-	100	79.240	Pundamilia_nyererei
ENSPLAG00000002303	-	88	52.456	ENSPNYG00000019384	mex3b	88	50.467	Pundamilia_nyererei
ENSPLAG00000002303	-	88	53.978	ENSPNAG00000002109	mex3b	86	67.606	Pygocentrus_nattereri
ENSPLAG00000002303	-	81	68.773	ENSRNOG00000025142	Mex3b	69	69.742	Rattus_norvegicus
ENSPLAG00000002303	-	59	68.773	ENSRBIG00000033099	MEX3B	71	69.742	Rhinopithecus_bieti
ENSPLAG00000002303	-	59	68.773	ENSRROG00000041868	MEX3B	71	69.742	Rhinopithecus_roxellana
ENSPLAG00000002303	-	58	68.702	ENSSBOG00000031708	MEX3B	61	69.697	Saimiri_boliviensis_boliviensis
ENSPLAG00000002303	-	88	52.165	ENSSFOG00015016667	mex3b	87	50.674	Scleropages_formosus
ENSPLAG00000002303	-	88	53.996	ENSSFOG00015016308	mex3b	69	65.734	Scleropages_formosus
ENSPLAG00000002303	-	86	76.063	ENSSMAG00000001075	-	100	82.444	Scophthalmus_maximus
ENSPLAG00000002303	-	88	53.229	ENSSMAG00000017078	mex3b	91	50.662	Scophthalmus_maximus
ENSPLAG00000002303	-	99	81.727	ENSSDUG00000022255	-	100	83.165	Seriola_dumerili
ENSPLAG00000002303	-	88	53.346	ENSSDUG00000013254	mex3b	73	70.543	Seriola_dumerili
ENSPLAG00000002303	-	99	80.830	ENSSLDG00000024917	-	100	82.260	Seriola_lalandi_dorsalis
ENSPLAG00000002303	-	88	53.150	ENSSLDG00000014620	mex3b	91	51.132	Seriola_lalandi_dorsalis
ENSPLAG00000002303	-	93	81.364	ENSSPAG00000002581	-	96	82.576	Stegastes_partitus
ENSPLAG00000002303	-	88	55.388	ENSSPAG00000011854	mex3b	90	54.292	Stegastes_partitus
ENSPLAG00000002303	-	59	68.773	ENSSSCG00000038491	MEX3B	55	69.742	Sus_scrofa
ENSPLAG00000002303	-	99	74.891	ENSTRUG00000011888	-	100	76.343	Takifugu_rubripes
ENSPLAG00000002303	-	88	54.604	ENSTRUG00000000367	mex3b	93	51.633	Takifugu_rubripes
ENSPLAG00000002303	-	88	53.689	ENSTNIG00000003398	mex3b	90	53.469	Tetraodon_nigroviridis
ENSPLAG00000002303	-	59	63.574	ENSUAMG00000019302	MEX3B	57	64.505	Ursus_americanus
ENSPLAG00000002303	-	88	53.027	ENSXETG00000027601	mex3b	99	50.187	Xenopus_tropicalis
ENSPLAG00000002303	-	82	86.453	ENSXCOG00000005190	-	99	86.453	Xiphophorus_couchianus
ENSPLAG00000002303	-	100	97.794	ENSXMAG00000015283	-	100	97.794	Xiphophorus_maculatus