EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002394 (Gene tree)
Gene ID: 106953282
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like protein 5B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6204 bases
Position: chrKQ545888.1:70247-76450
Accession: 106953282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001361	MMR_HSR1	PF01926.23	8.7e-08	1	1
ENSPLAP00000001362	MMR_HSR1	PF01926.23	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014875	-	1689	XM_015041912	ENSPLAP00000001362	179 (aa)	XP_014897398	UPI00072E0789
ENSPLAT00000014874	-	537	-	ENSPLAP00000001361	178 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000002394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002394	arl5c	85	46.203	ENSPLAG00000017420	arl4aa	79	46.203
ENSPLAG00000002394	arl5c	98	48.864	ENSPLAG00000000596	-	98	48.864
ENSPLAG00000002394	arl5c	96	34.706	ENSPLAG00000008384	arl3l2	91	34.706
ENSPLAG00000002394	arl5c	96	45.614	ENSPLAG00000012898	arl1	94	45.614
ENSPLAG00000002394	arl5c	98	70.857	ENSPLAG00000021807	arl8	98	70.857
ENSPLAG00000002394	arl5c	81	42.069	ENSPLAG00000000576	arl11	91	42.069
ENSPLAG00000002394	arl5c	100	45.000	ENSPLAG00000015630	-	100	45.000
ENSPLAG00000002394	arl5c	89	43.114	ENSPLAG00000007735	arl4cb	85	43.114
ENSPLAG00000002394	arl5c	83	39.216	ENSPLAG00000017362	arl14	88	39.216
ENSPLAG00000002394	arl5c	96	38.728	ENSPLAG00000001962	arl3	89	40.252
ENSPLAG00000002394	arl5c	85	42.105	ENSPLAG00000016871	-	70	42.105
ENSPLAG00000002394	arl5c	96	39.888	ENSPLAG00000012234	-	90	39.888
ENSPLAG00000002394	arl5c	94	38.547	ENSPLAG00000022207	arfrp1	89	38.547
ENSPLAG00000002394	arl5c	63	33.613	ENSPLAG00000014563	rab4a	54	33.613
ENSPLAG00000002394	arl5c	56	33.333	ENSPLAG00000001016	-	64	33.333
ENSPLAG00000002394	arl5c	56	31.313	ENSPLAG00000012223	sar1b	71	31.313
ENSPLAG00000002394	arl5c	97	34.831	ENSPLAG00000008306	ARL6	96	34.831
ENSPLAG00000002394	arl5c	89	42.683	ENSPLAG00000019168	arl4d	81	42.683
ENSPLAG00000002394	arl5c	62	31.034	ENSPLAG00000010104	rab18a	57	31.034
ENSPLAG00000002394	arl5c	98	71.023	ENSPLAG00000016532	arl5a	80	71.023
ENSPLAG00000002394	arl5c	79	45.775	ENSPLAG00000007217	-	95	45.775
ENSPLAG00000002394	arl5c	96	43.103	ENSPLAG00000012381	arl2	93	43.103
ENSPLAG00000002394	arl5c	63	30.508	ENSPLAG00000023374	rab2a	55	30.508
ENSPLAG00000002394	arl5c	98	48.588	ENSPLAG00000020696	arf2b	98	48.588
ENSPLAG00000002394	arl5c	99	42.697	ENSPLAG00000015887	-	99	42.697
ENSPLAG00000002394	arl5c	98	48.023	ENSPLAG00000020941	-	98	48.023
ENSPLAG00000002394	arl5c	98	50.568	ENSPLAG00000001041	-	98	50.568
ENSPLAG00000002394	arl5c	98	48.023	ENSPLAG00000015550	arf3b	98	48.023
ENSPLAG00000002394	arl5c	98	46.328	ENSPLAG00000006742	arf5	98	46.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002394	arl5c	100	90.503	ENSAPOG00000005821	arl5c	100	90.503	Acanthochromis_polyacanthus
ENSPLAG00000002394	arl5c	92	93.293	ENSACIG00000008975	arl5c	91	93.293	Amphilophus_citrinellus
ENSPLAG00000002394	arl5c	100	90.503	ENSAOCG00000010448	arl5c	100	90.503	Amphiprion_ocellaris
ENSPLAG00000002394	arl5c	100	90.503	ENSAPEG00000002699	arl5c	100	90.503	Amphiprion_percula
ENSPLAG00000002394	arl5c	100	89.385	ENSATEG00000000181	arl5c	100	89.385	Anabas_testudineus
ENSPLAG00000002394	arl5c	100	92.179	ENSACLG00000000922	arl5c	100	92.683	Astatotilapia_calliptera
ENSPLAG00000002394	arl5c	100	82.682	ENSAMXG00000031771	arl5c	100	82.682	Astyanax_mexicanus
ENSPLAG00000002394	arl5c	100	85.475	ENSCSEG00000009845	arl5c	100	85.475	Cynoglossus_semilaevis
ENSPLAG00000002394	arl5c	100	95.531	ENSCVAG00000012706	arl5c	100	95.531	Cyprinodon_variegatus
ENSPLAG00000002394	arl5c	100	82.123	ENSDARG00000035719	arl5c	100	82.123	Danio_rerio
ENSPLAG00000002394	arl5c	100	84.916	ENSELUG00000016864	arl5c	100	84.916	Esox_lucius
ENSPLAG00000002394	arl5c	100	96.648	ENSFHEG00000013677	arl5c	100	96.648	Fundulus_heteroclitus
ENSPLAG00000002394	arl5c	100	96.648	ENSGAFG00000002547	arl5c	100	96.648	Gambusia_affinis
ENSPLAG00000002394	arl5c	98	90.909	ENSGACG00000009321	arl5c	98	90.909	Gasterosteus_aculeatus
ENSPLAG00000002394	arl5c	100	92.179	ENSHBUG00000007301	arl5c	100	92.179	Haplochromis_burtoni
ENSPLAG00000002394	arl5c	100	83.799	ENSHCOG00000017576	-	100	83.799	Hippocampus_comes
ENSPLAG00000002394	arl5c	100	83.240	ENSIPUG00000023232	arl5c	100	83.240	Ictalurus_punctatus
ENSPLAG00000002394	arl5c	100	93.296	ENSKMAG00000011323	arl5c	100	93.296	Kryptolebias_marmoratus
ENSPLAG00000002394	arl5c	100	88.268	ENSLBEG00000006177	arl5c	86	88.268	Labrus_bergylta
ENSPLAG00000002394	arl5c	100	87.709	ENSMAMG00000022157	arl5c	100	87.709	Mastacembelus_armatus
ENSPLAG00000002394	arl5c	100	92.179	ENSMZEG00005022925	arl5c	100	92.179	Maylandia_zebra
ENSPLAG00000002394	arl5c	95	88.757	ENSMMOG00000020851	arl5c	99	88.757	Mola_mola
ENSPLAG00000002394	arl5c	92	90.244	ENSMALG00000009306	arl5c	93	90.244	Monopterus_albus
ENSPLAG00000002394	arl5c	100	92.737	ENSNBRG00000020245	arl5c	100	93.293	Neolamprologus_brichardi
ENSPLAG00000002394	arl5c	100	92.737	ENSONIG00000000890	arl5c	99	92.737	Oreochromis_niloticus
ENSPLAG00000002394	arl5c	100	86.034	ENSORLG00000002960	arl5c	100	86.585	Oryzias_latipes
ENSPLAG00000002394	arl5c	100	86.034	ENSORLG00020010074	arl5c	100	86.585	Oryzias_latipes_hni
ENSPLAG00000002394	arl5c	100	86.034	ENSORLG00015002752	arl5c	100	86.585	Oryzias_latipes_hsok
ENSPLAG00000002394	arl5c	97	86.705	ENSOMEG00000021718	arl5c	98	86.705	Oryzias_melastigma
ENSPLAG00000002394	arl5c	100	84.358	ENSPKIG00000021727	arl5c	100	84.358	Paramormyrops_kingsleyae
ENSPLAG00000002394	arl5c	100	98.324	ENSPFOG00000007842	arl5c	99	98.324	Poecilia_formosa
ENSPLAG00000002394	arl5c	96	95.906	ENSPMEG00000000631	arl5c	97	95.906	Poecilia_mexicana
ENSPLAG00000002394	arl5c	100	98.883	ENSPREG00000008730	arl5c	100	98.883	Poecilia_reticulata
ENSPLAG00000002394	arl5c	100	92.179	ENSPNYG00000012720	arl5c	100	92.683	Pundamilia_nyererei
ENSPLAG00000002394	arl5c	100	82.123	ENSPNAG00000002310	arl5c	100	82.123	Pygocentrus_nattereri
ENSPLAG00000002394	arl5c	100	82.682	ENSSFOG00015023529	arl5c	100	82.682	Scleropages_formosus
ENSPLAG00000002394	arl5c	100	88.268	ENSSMAG00000010552	arl5c	100	88.268	Scophthalmus_maximus
ENSPLAG00000002394	arl5c	100	86.592	ENSSDUG00000022640	arl5c	100	86.592	Seriola_dumerili
ENSPLAG00000002394	arl5c	100	86.592	ENSSLDG00000000728	arl5c	100	86.592	Seriola_lalandi_dorsalis
ENSPLAG00000002394	arl5c	100	89.944	ENSSPAG00000007687	arl5c	100	89.944	Stegastes_partitus
ENSPLAG00000002394	arl5c	100	89.385	ENSTRUG00000022814	arl5c	100	89.385	Takifugu_rubripes
ENSPLAG00000002394	arl5c	100	88.827	ENSTNIG00000003015	arl5c	99	88.827	Tetraodon_nigroviridis
ENSPLAG00000002394	arl5c	100	96.648	ENSXCOG00000017380	arl5c	100	96.648	Xiphophorus_couchianus
ENSPLAG00000002394	arl5c	100	96.089	ENSXMAG00000008447	arl5c	100	96.089	Xiphophorus_maculatus