EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002449 (Gene tree)
Gene ID: 106953271
Gene Symbol: lsm14b
Alias: -
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8781 bases
Position: chrKQ545887.1:537056-545836
Accession: 106953271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001413	FDF	PF09532.10	1.3e-09	1	1
ENSPLAP00000001413	SM-ATX	PF14438.6	3.8e-08	1	1
ENSPLAP00000001413	LSM14	PF12701.7	1.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014791	-	3537	XM_015041892	ENSPLAP00000001413	369 (aa)	XP_014897378	UPI00072E177E

Gene Model

Click here to download ENSPLAG00000002449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002449	lsm14b	89	46.264	ENSPLAG00000005793	LSM14B	99	45.573
ENSPLAG00000002449	lsm14b	91	40.955	ENSPLAG00000012025	lsm14ab	88	44.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002449	lsm14b	92	52.066	ENSG00000149657	LSM14B	100	51.646	Homo_sapiens
ENSPLAG00000002449	lsm14b	100	76.550	ENSAPOG00000001780	lsm14b	100	76.550	Acanthochromis_polyacanthus
ENSPLAG00000002449	lsm14b	91	46.115	ENSAMEG00000013430	LSM14B	99	46.172	Ailuropoda_melanoleuca
ENSPLAG00000002449	lsm14b	99	68.478	ENSACIG00000012266	lsm14b	99	68.493	Amphilophus_citrinellus
ENSPLAG00000002449	lsm14b	62	38.272	ENSACIG00000003147	LSM14B	92	40.726	Amphilophus_citrinellus
ENSPLAG00000002449	lsm14b	100	76.819	ENSAOCG00000012380	lsm14b	100	76.819	Amphiprion_ocellaris
ENSPLAG00000002449	lsm14b	96	44.386	ENSAOCG00000006667	LSM14B	96	44.386	Amphiprion_ocellaris
ENSPLAG00000002449	lsm14b	100	67.751	ENSAPEG00000023633	lsm14b	100	68.835	Amphiprion_percula
ENSPLAG00000002449	lsm14b	66	40.418	ENSATEG00000015895	LSM14B	91	38.889	Anabas_testudineus
ENSPLAG00000002449	lsm14b	100	67.819	ENSATEG00000016603	lsm14b	100	70.479	Anabas_testudineus
ENSPLAG00000002449	lsm14b	82	42.818	ENSAPLG00000013203	LSM14B	99	43.392	Anas_platyrhynchos
ENSPLAG00000002449	lsm14b	91	50.970	ENSACAG00000016195	LSM14B	99	51.399	Anolis_carolinensis
ENSPLAG00000002449	lsm14b	92	52.066	ENSANAG00000037915	LSM14B	100	52.261	Aotus_nancymaae
ENSPLAG00000002449	lsm14b	52	36.019	ENSACLG00000019624	-	70	39.706	Astatotilapia_calliptera
ENSPLAG00000002449	lsm14b	52	34.597	ENSACLG00000011955	-	70	38.235	Astatotilapia_calliptera
ENSPLAG00000002449	lsm14b	100	70.081	ENSACLG00000019663	lsm14b	100	70.081	Astatotilapia_calliptera
ENSPLAG00000002449	lsm14b	52	35.961	ENSACLG00000008384	-	68	38.164	Astatotilapia_calliptera
ENSPLAG00000002449	lsm14b	90	53.315	ENSAMXG00000002865	lsm14b	99	54.962	Astyanax_mexicanus
ENSPLAG00000002449	lsm14b	92	46.929	ENSBTAG00000021558	LSM14B	100	47.153	Bos_taurus
ENSPLAG00000002449	lsm14b	92	51.902	ENSCJAG00000014434	LSM14B	100	51.500	Callithrix_jacchus
ENSPLAG00000002449	lsm14b	81	43.443	ENSCAFG00000012518	LSM14B	98	43.719	Canis_familiaris
ENSPLAG00000002449	lsm14b	92	52.044	ENSCAFG00020022150	LSM14B	100	51.880	Canis_lupus_dingo
ENSPLAG00000002449	lsm14b	92	52.459	ENSCHIG00000010284	-	100	52.261	Capra_hircus
ENSPLAG00000002449	lsm14b	99	40.759	ENSCHIG00000022681	-	100	40.409	Capra_hircus
ENSPLAG00000002449	lsm14b	80	46.875	ENSTSYG00000031914	LSM14B	89	46.875	Carlito_syrichta
ENSPLAG00000002449	lsm14b	81	47.040	ENSCAPG00000013059	LSM14B	100	46.742	Cavia_aperea
ENSPLAG00000002449	lsm14b	80	47.188	ENSCPOG00000038080	LSM14B	100	46.875	Cavia_porcellus
ENSPLAG00000002449	lsm14b	92	51.791	ENSCCAG00000021267	LSM14B	100	51.392	Cebus_capucinus
ENSPLAG00000002449	lsm14b	92	38.268	ENSCCAG00000024900	-	83	38.718	Cebus_capucinus
ENSPLAG00000002449	lsm14b	92	51.791	ENSCATG00000036006	LSM14B	100	51.392	Cercocebus_atys
ENSPLAG00000002449	lsm14b	80	48.750	ENSCLAG00000003186	LSM14B	100	47.443	Chinchilla_lanigera
ENSPLAG00000002449	lsm14b	92	47.015	ENSCSAG00000015729	LSM14B	100	47.765	Chlorocebus_sabaeus
ENSPLAG00000002449	lsm14b	91	47.368	ENSCPBG00000027065	LSM14B	99	47.564	Chrysemys_picta_bellii
ENSPLAG00000002449	lsm14b	80	48.438	ENSCANG00000036986	LSM14B	100	48.295	Colobus_angolensis_palliatus
ENSPLAG00000002449	lsm14b	92	52.617	ENSCGRG00001018399	Lsm14b	100	52.152	Cricetulus_griseus_chok1gshd
ENSPLAG00000002449	lsm14b	61	36.897	ENSCGRG00000006111	-	99	38.944	Cricetulus_griseus_crigri
ENSPLAG00000002449	lsm14b	100	68.351	ENSCSEG00000004722	lsm14b	100	68.351	Cynoglossus_semilaevis
ENSPLAG00000002449	lsm14b	94	45.745	ENSCSEG00000020669	LSM14B	95	47.297	Cynoglossus_semilaevis
ENSPLAG00000002449	lsm14b	64	34.387	ENSCVAG00000012433	-	95	34.387	Cyprinodon_variegatus
ENSPLAG00000002449	lsm14b	99	53.351	ENSDARG00000025386	lsm14b	99	53.351	Danio_rerio
ENSPLAG00000002449	lsm14b	61	37.895	ENSDNOG00000025246	LSM14B	100	39.117	Dasypus_novemcinctus
ENSPLAG00000002449	lsm14b	81	48.297	ENSDORG00000016683	Lsm14b	100	38.217	Dipodomys_ordii
ENSPLAG00000002449	lsm14b	57	35.841	ENSETEG00000011188	-	94	36.283	Echinops_telfairi
ENSPLAG00000002449	lsm14b	92	40.390	ENSETEG00000001869	-	95	40.162	Echinops_telfairi
ENSPLAG00000002449	lsm14b	61	40.249	ENSEASG00005023218	LSM14B	100	41.392	Equus_asinus_asinus
ENSPLAG00000002449	lsm14b	92	51.240	ENSECAG00000010659	LSM14B	100	51.139	Equus_caballus
ENSPLAG00000002449	lsm14b	56	63.000	ENSEEUG00000007331	LSM14B	79	63.000	Erinaceus_europaeus
ENSPLAG00000002449	lsm14b	98	58.995	ENSELUG00000005780	lsm14b	99	58.793	Esox_lucius
ENSPLAG00000002449	lsm14b	90	48.397	ENSELUG00000016299	LSM14B	99	48.942	Esox_lucius
ENSPLAG00000002449	lsm14b	92	51.791	ENSFCAG00000003248	LSM14B	100	51.646	Felis_catus
ENSPLAG00000002449	lsm14b	81	44.173	ENSFALG00000010618	LSM14B	100	44.389	Ficedula_albicollis
ENSPLAG00000002449	lsm14b	80	47.500	ENSFDAG00000002214	LSM14B	100	47.443	Fukomys_damarensis
ENSPLAG00000002449	lsm14b	100	79.459	ENSFHEG00000006237	lsm14b	100	79.459	Fundulus_heteroclitus
ENSPLAG00000002449	lsm14b	70	47.653	ENSFHEG00000003362	LSM14B	71	48.084	Fundulus_heteroclitus
ENSPLAG00000002449	lsm14b	100	60.372	ENSGMOG00000017115	lsm14b	99	61.436	Gadus_morhua
ENSPLAG00000002449	lsm14b	91	50.275	ENSGALG00000005125	LSM14B	99	51.768	Gallus_gallus
ENSPLAG00000002449	lsm14b	66	37.209	ENSGAFG00000013723	LSM14B	97	39.130	Gambusia_affinis
ENSPLAG00000002449	lsm14b	100	86.828	ENSGAFG00000020318	lsm14b	100	86.828	Gambusia_affinis
ENSPLAG00000002449	lsm14b	99	69.624	ENSGACG00000009973	lsm14b	99	69.624	Gasterosteus_aculeatus
ENSPLAG00000002449	lsm14b	53	41.509	ENSGAGG00000004106	LSM14B	91	43.033	Gopherus_agassizii
ENSPLAG00000002449	lsm14b	82	47.853	ENSGGOG00000005630	LSM14B	95	47.765	Gorilla_gorilla
ENSPLAG00000002449	lsm14b	92	51.240	ENSHGLG00000015055	LSM14B	100	50.886	Heterocephalus_glaber_female
ENSPLAG00000002449	lsm14b	80	47.003	ENSHGLG00100015273	LSM14B	100	46.991	Heterocephalus_glaber_male
ENSPLAG00000002449	lsm14b	92	45.902	ENSHCOG00000018747	LSM14B	93	46.703	Hippocampus_comes
ENSPLAG00000002449	lsm14b	69	51.550	ENSHCOG00000004867	lsm14b	100	51.550	Hippocampus_comes
ENSPLAG00000002449	lsm14b	91	55.068	ENSIPUG00000014946	lsm14b	94	57.106	Ictalurus_punctatus
ENSPLAG00000002449	lsm14b	80	48.125	ENSSTOG00000020482	LSM14B	100	48.011	Ictidomys_tridecemlineatus
ENSPLAG00000002449	lsm14b	91	51.676	ENSJJAG00000012728	Lsm14b	99	51.282	Jaculus_jaculus
ENSPLAG00000002449	lsm14b	100	73.243	ENSKMAG00000017524	lsm14b	100	75.405	Kryptolebias_marmoratus
ENSPLAG00000002449	lsm14b	51	36.058	ENSKMAG00000012834	-	95	40.909	Kryptolebias_marmoratus
ENSPLAG00000002449	lsm14b	69	37.308	ENSLBEG00000007951	LSM14B	100	36.538	Labrus_bergylta
ENSPLAG00000002449	lsm14b	91	45.885	ENSLACG00000003849	LSM14B	100	48.131	Latimeria_chalumnae
ENSPLAG00000002449	lsm14b	99	54.639	ENSLOCG00000003746	lsm14b	99	55.412	Lepisosteus_oculatus
ENSPLAG00000002449	lsm14b	82	45.427	ENSLAFG00000007492	LSM14B	100	46.910	Loxodonta_africana
ENSPLAG00000002449	lsm14b	92	52.066	ENSMFAG00000041479	LSM14B	100	51.646	Macaca_fascicularis
ENSPLAG00000002449	lsm14b	92	52.066	ENSMMUG00000014084	LSM14B	100	51.646	Macaca_mulatta
ENSPLAG00000002449	lsm14b	92	52.066	ENSMNEG00000045573	LSM14B	100	51.646	Macaca_nemestrina
ENSPLAG00000002449	lsm14b	80	48.125	ENSMLEG00000040895	LSM14B	100	48.011	Mandrillus_leucophaeus
ENSPLAG00000002449	lsm14b	100	72.267	ENSMAMG00000020539	lsm14b	100	72.267	Mastacembelus_armatus
ENSPLAG00000002449	lsm14b	92	50.430	ENSMAMG00000024124	LSM14B	92	50.430	Mastacembelus_armatus
ENSPLAG00000002449	lsm14b	91	43.889	ENSMZEG00005026001	LSM14B	96	47.527	Maylandia_zebra
ENSPLAG00000002449	lsm14b	100	70.081	ENSMZEG00005000987	lsm14b	100	70.081	Maylandia_zebra
ENSPLAG00000002449	lsm14b	52	37.000	ENSMZEG00005026087	-	69	38.235	Maylandia_zebra
ENSPLAG00000002449	lsm14b	52	37.500	ENSMZEG00005002688	-	69	37.745	Maylandia_zebra
ENSPLAG00000002449	lsm14b	82	46.407	ENSMGAG00000005300	LSM14B	99	48.361	Meleagris_gallopavo
ENSPLAG00000002449	lsm14b	92	52.066	ENSMAUG00000020700	Lsm14b	100	51.646	Mesocricetus_auratus
ENSPLAG00000002449	lsm14b	92	51.791	ENSMICG00000014675	LSM14B	100	51.392	Microcebus_murinus
ENSPLAG00000002449	lsm14b	92	52.066	ENSMOCG00000020600	Lsm14b	100	51.646	Microtus_ochrogaster
ENSPLAG00000002449	lsm14b	53	37.681	ENSMOCG00000005119	-	93	34.831	Microtus_ochrogaster
ENSPLAG00000002449	lsm14b	90	48.837	ENSMMOG00000017321	LSM14B	99	47.594	Mola_mola
ENSPLAG00000002449	lsm14b	89	64.167	ENSMMOG00000020042	lsm14b	99	63.969	Mola_mola
ENSPLAG00000002449	lsm14b	61	36.879	ENSMODG00000016690	LSM14B	100	39.172	Monodelphis_domestica
ENSPLAG00000002449	lsm14b	91	46.779	ENSMALG00000022251	LSM14B	96	47.215	Monopterus_albus
ENSPLAG00000002449	lsm14b	100	69.786	ENSMALG00000004783	lsm14b	97	70.321	Monopterus_albus
ENSPLAG00000002449	lsm14b	92	52.342	MGP_CAROLIEiJ_G0024770	Lsm14b	100	51.899	Mus_caroli
ENSPLAG00000002449	lsm14b	92	52.342	ENSMUSG00000039108	Lsm14b	100	51.899	Mus_musculus
ENSPLAG00000002449	lsm14b	92	52.342	MGP_PahariEiJ_G0026214	Lsm14b	100	51.899	Mus_pahari
ENSPLAG00000002449	lsm14b	92	52.342	MGP_SPRETEiJ_G0025693	Lsm14b	100	51.899	Mus_spretus
ENSPLAG00000002449	lsm14b	86	42.932	ENSMPUG00000007584	LSM14B	100	43.237	Mustela_putorius_furo
ENSPLAG00000002449	lsm14b	91	52.500	ENSMLUG00000000304	LSM14B	100	52.645	Myotis_lucifugus
ENSPLAG00000002449	lsm14b	53	37.946	ENSNGAG00000016550	Lsm14b	99	39.669	Nannospalax_galili
ENSPLAG00000002449	lsm14b	80	48.750	ENSNLEG00000015757	LSM14B	100	48.295	Nomascus_leucogenys
ENSPLAG00000002449	lsm14b	66	69.930	ENSMEUG00000008267	-	79	69.930	Notamacropus_eugenii
ENSPLAG00000002449	lsm14b	92	51.515	ENSODEG00000004099	LSM14B	100	51.139	Octodon_degus
ENSPLAG00000002449	lsm14b	100	71.698	ENSONIG00000020318	lsm14b	100	71.698	Oreochromis_niloticus
ENSPLAG00000002449	lsm14b	74	51.429	ENSOANG00000003370	LSM14B	96	51.429	Ornithorhynchus_anatinus
ENSPLAG00000002449	lsm14b	81	47.692	ENSOCUG00000006279	LSM14B	100	47.619	Oryctolagus_cuniculus
ENSPLAG00000002449	lsm14b	92	42.541	ENSORLG00000028353	LSM14B	98	41.927	Oryzias_latipes
ENSPLAG00000002449	lsm14b	100	75.068	ENSORLG00000013525	lsm14b	100	75.339	Oryzias_latipes
ENSPLAG00000002449	lsm14b	100	75.068	ENSORLG00020020553	lsm14b	100	75.339	Oryzias_latipes_hni
ENSPLAG00000002449	lsm14b	62	31.395	ENSORLG00020018191	-	97	32.500	Oryzias_latipes_hni
ENSPLAG00000002449	lsm14b	100	75.068	ENSORLG00015016862	lsm14b	100	75.339	Oryzias_latipes_hsok
ENSPLAG00000002449	lsm14b	92	42.265	ENSORLG00015013157	LSM14B	98	41.667	Oryzias_latipes_hsok
ENSPLAG00000002449	lsm14b	63	33.761	ENSOMEG00000000171	-	88	34.615	Oryzias_melastigma
ENSPLAG00000002449	lsm14b	100	74.255	ENSOMEG00000023917	lsm14b	100	74.526	Oryzias_melastigma
ENSPLAG00000002449	lsm14b	92	46.766	ENSOGAG00000003915	LSM14B	100	48.000	Otolemur_garnettii
ENSPLAG00000002449	lsm14b	83	42.276	ENSOARG00000014706	LSM14B	99	43.564	Ovis_aries
ENSPLAG00000002449	lsm14b	82	47.853	ENSPPAG00000035799	LSM14B	95	47.765	Pan_paniscus
ENSPLAG00000002449	lsm14b	92	51.791	ENSPPRG00000009197	LSM14B	100	51.646	Panthera_pardus
ENSPLAG00000002449	lsm14b	61	40.249	ENSPTIG00000021518	LSM14B	99	41.509	Panthera_tigris_altaica
ENSPLAG00000002449	lsm14b	92	52.066	ENSPTRG00000013696	LSM14B	100	51.646	Pan_troglodytes
ENSPLAG00000002449	lsm14b	92	52.066	ENSPANG00000011747	LSM14B	100	51.646	Papio_anubis
ENSPLAG00000002449	lsm14b	99	56.136	ENSPKIG00000003275	lsm14b	94	76.190	Paramormyrops_kingsleyae
ENSPLAG00000002449	lsm14b	81	49.235	ENSPSIG00000014762	LSM14B	100	49.304	Pelodiscus_sinensis
ENSPLAG00000002449	lsm14b	91	53.073	ENSPEMG00000017688	Lsm14b	99	52.564	Peromyscus_maniculatus_bairdii
ENSPLAG00000002449	lsm14b	92	52.617	ENSPCIG00000013405	LSM14B	100	52.405	Phascolarctos_cinereus
ENSPLAG00000002449	lsm14b	100	99.187	ENSPFOG00000005631	lsm14b	100	99.187	Poecilia_formosa
ENSPLAG00000002449	lsm14b	88	47.353	ENSPMEG00000022953	LSM14B	99	46.753	Poecilia_mexicana
ENSPLAG00000002449	lsm14b	100	98.645	ENSPMEG00000000745	lsm14b	100	98.645	Poecilia_mexicana
ENSPLAG00000002449	lsm14b	62	36.508	ENSPREG00000007828	LSM14B	100	38.214	Poecilia_reticulata
ENSPLAG00000002449	lsm14b	92	46.631	ENSPPYG00000011194	LSM14B	100	47.525	Pongo_abelii
ENSPLAG00000002449	lsm14b	92	52.066	ENSPCOG00000013625	LSM14B	100	51.646	Propithecus_coquereli
ENSPLAG00000002449	lsm14b	90	57.183	ENSPNAG00000012777	lsm14b	99	56.777	Pygocentrus_nattereri
ENSPLAG00000002449	lsm14b	92	46.517	ENSRNOG00000054557	Lsm14b	100	46.544	Rattus_norvegicus
ENSPLAG00000002449	lsm14b	81	48.287	ENSRBIG00000033461	LSM14B	99	48.023	Rhinopithecus_bieti
ENSPLAG00000002449	lsm14b	82	49.541	ENSRROG00000042949	LSM14B	91	49.304	Rhinopithecus_roxellana
ENSPLAG00000002449	lsm14b	80	48.125	ENSSBOG00000032820	LSM14B	100	48.011	Saimiri_boliviensis_boliviensis
ENSPLAG00000002449	lsm14b	81	47.988	ENSSHAG00000015528	LSM14B	96	48.169	Sarcophilus_harrisii
ENSPLAG00000002449	lsm14b	90	55.493	ENSSFOG00015004627	lsm14b	96	57.143	Scleropages_formosus
ENSPLAG00000002449	lsm14b	100	73.740	ENSSMAG00000012725	lsm14b	100	73.740	Scophthalmus_maximus
ENSPLAG00000002449	lsm14b	96	47.520	ENSSMAG00000000135	LSM14B	96	48.556	Scophthalmus_maximus
ENSPLAG00000002449	lsm14b	91	49.300	ENSSDUG00000022770	LSM14B	92	51.667	Seriola_dumerili
ENSPLAG00000002449	lsm14b	100	74.933	ENSSDUG00000020977	lsm14b	100	74.933	Seriola_dumerili
ENSPLAG00000002449	lsm14b	62	40.873	ENSSLDG00000011354	-	91	41.538	Seriola_lalandi_dorsalis
ENSPLAG00000002449	lsm14b	51	38.942	ENSSARG00000007749	-	96	40.385	Sorex_araneus
ENSPLAG00000002449	lsm14b	91	47.750	ENSSPUG00000014360	LSM14B	99	47.685	Sphenodon_punctatus
ENSPLAG00000002449	lsm14b	67	35.662	ENSSPAG00000018854	-	97	35.662	Stegastes_partitus
ENSPLAG00000002449	lsm14b	100	72.703	ENSSPAG00000020915	lsm14b	100	73.243	Stegastes_partitus
ENSPLAG00000002449	lsm14b	92	50.815	ENSSSCG00000026052	LSM14B	100	37.931	Sus_scrofa
ENSPLAG00000002449	lsm14b	81	49.848	ENSTGUG00000007884	LSM14B	100	49.721	Taeniopygia_guttata
ENSPLAG00000002449	lsm14b	91	47.922	ENSTRUG00000001529	LSM14B	99	47.520	Takifugu_rubripes
ENSPLAG00000002449	lsm14b	100	69.086	ENSTRUG00000011354	lsm14b	100	69.086	Takifugu_rubripes
ENSPLAG00000002449	lsm14b	100	66.582	ENSTNIG00000002445	lsm14b	100	66.582	Tetraodon_nigroviridis
ENSPLAG00000002449	lsm14b	75	78.571	ENSTTRG00000011043	LSM14B	100	38.710	Tursiops_truncatus
ENSPLAG00000002449	lsm14b	89	46.045	ENSUAMG00000025298	LSM14B	99	46.373	Ursus_americanus
ENSPLAG00000002449	lsm14b	89	46.045	ENSUMAG00000000480	LSM14B	99	46.373	Ursus_maritimus
ENSPLAG00000002449	lsm14b	81	48.624	ENSVVUG00000015920	LSM14B	98	48.747	Vulpes_vulpes
ENSPLAG00000002449	lsm14b	85	50.585	ENSXETG00000001997	lsm14b	99	51.917	Xenopus_tropicalis
ENSPLAG00000002449	lsm14b	100	91.057	ENSXMAG00000010013	lsm14b	100	91.057	Xiphophorus_maculatus