EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002471 (Gene tree)
Gene ID: 106937371
Gene Symbol: gatc
Alias: -
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2842 bases
Position: chrKQ545394.1:516841-519682
Accession: 106937371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001421	Glu-tRNAGln	PF02686.15	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014758	-	1217	XM_015018829	ENSPLAP00000001421	185 (aa)	XP_014874315	UPI00072E97B7

Gene Model

Click here to download ENSPLAG00000002471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002471	gatc	56	60.952	ENSG00000257218	GATC	100	68.085	Homo_sapiens
ENSPLAG00000002471	gatc	56	60.952	ENSAMEG00000013298	-	77	60.952	Ailuropoda_melanoleuca
ENSPLAG00000002471	gatc	52	83.333	ENSACIG00000016853	gatc	69	83.333	Amphilophus_citrinellus
ENSPLAG00000002471	gatc	68	88.800	ENSAOCG00000014641	gatc	100	88.800	Amphiprion_ocellaris
ENSPLAG00000002471	gatc	98	69.474	ENSAPEG00000023411	gatc	97	69.474	Amphiprion_percula
ENSPLAG00000002471	gatc	51	88.421	ENSATEG00000009237	gatc	79	88.421	Anabas_testudineus
ENSPLAG00000002471	gatc	51	76.842	ENSACAG00000002868	-	70	76.842	Anolis_carolinensis
ENSPLAG00000002471	gatc	56	61.905	ENSANAG00000034389	-	77	61.905	Aotus_nancymaae
ENSPLAG00000002471	gatc	98	69.519	ENSACLG00000026251	gatc	97	69.519	Astatotilapia_calliptera
ENSPLAG00000002471	gatc	71	78.788	ENSAMXG00000004252	gatc	64	73.510	Astyanax_mexicanus
ENSPLAG00000002471	gatc	56	57.143	ENSBTAG00000012791	GATC	77	57.143	Bos_taurus
ENSPLAG00000002471	gatc	63	38.462	WBGene00013433	Y66D12A.7	67	38.462	Caenorhabditis_elegans
ENSPLAG00000002471	gatc	54	63.000	ENSCJAG00000001183	-	58	61.905	Callithrix_jacchus
ENSPLAG00000002471	gatc	56	61.905	ENSCAFG00000010311	-	77	61.905	Canis_familiaris
ENSPLAG00000002471	gatc	56	61.905	ENSCAFG00020020606	-	77	61.905	Canis_lupus_dingo
ENSPLAG00000002471	gatc	59	54.955	ENSCHIG00000019423	-	82	54.955	Capra_hircus
ENSPLAG00000002471	gatc	54	62.000	ENSTSYG00000006845	-	74	62.000	Carlito_syrichta
ENSPLAG00000002471	gatc	51	60.417	ENSCPOG00000026436	-	65	60.417	Cavia_porcellus
ENSPLAG00000002471	gatc	56	61.905	ENSCCAG00000022235	-	77	61.905	Cebus_capucinus
ENSPLAG00000002471	gatc	56	60.952	ENSCATG00000038807	GATC	77	60.952	Cercocebus_atys
ENSPLAG00000002471	gatc	55	59.804	ENSCLAG00000011015	-	64	59.804	Chinchilla_lanigera
ENSPLAG00000002471	gatc	56	61.905	ENSCSAG00000002259	GATC	77	61.905	Chlorocebus_sabaeus
ENSPLAG00000002471	gatc	54	62.000	ENSCHOG00000009235	-	74	62.000	Choloepus_hoffmanni
ENSPLAG00000002471	gatc	69	62.500	ENSCPBG00000011342	-	68	62.500	Chrysemys_picta_bellii
ENSPLAG00000002471	gatc	55	61.386	ENSCANG00000031071	GATC	74	61.386	Colobus_angolensis_palliatus
ENSPLAG00000002471	gatc	51	62.105	ENSCGRG00001019220	-	61	62.105	Cricetulus_griseus_chok1gshd
ENSPLAG00000002471	gatc	51	62.105	ENSCGRG00000004184	-	61	62.105	Cricetulus_griseus_crigri
ENSPLAG00000002471	gatc	99	65.405	ENSCSEG00000007798	gatc	92	65.405	Cynoglossus_semilaevis
ENSPLAG00000002471	gatc	77	64.336	ENSCSEG00000016618	-	74	64.336	Cynoglossus_semilaevis
ENSPLAG00000002471	gatc	100	82.011	ENSCVAG00000004364	gatc	100	82.011	Cyprinodon_variegatus
ENSPLAG00000002471	gatc	76	74.286	ENSDARG00000056855	gatc	76	74.286	Danio_rerio
ENSPLAG00000002471	gatc	54	60.606	ENSDNOG00000012593	-	55	60.000	Dasypus_novemcinctus
ENSPLAG00000002471	gatc	63	44.444	FBgn0064115	GatC	78	44.444	Drosophila_melanogaster
ENSPLAG00000002471	gatc	54	52.525	ENSETEG00000002604	-	73	52.525	Echinops_telfairi
ENSPLAG00000002471	gatc	57	48.571	ENSEBUG00000008772	gatc	60	48.571	Eptatretus_burgeri
ENSPLAG00000002471	gatc	54	63.000	ENSECAG00000011118	-	74	63.000	Equus_caballus
ENSPLAG00000002471	gatc	54	56.566	ENSEEUG00000011638	-	73	56.566	Erinaceus_europaeus
ENSPLAG00000002471	gatc	76	66.438	ENSELUG00000012608	gatc	75	77.670	Esox_lucius
ENSPLAG00000002471	gatc	56	60.952	ENSFCAG00000038718	-	77	60.952	Felis_catus
ENSPLAG00000002471	gatc	73	55.556	ENSFALG00000007564	-	84	55.556	Ficedula_albicollis
ENSPLAG00000002471	gatc	59	61.818	ENSFDAG00000018720	-	80	61.818	Fukomys_damarensis
ENSPLAG00000002471	gatc	100	84.946	ENSFHEG00000014992	GATC	100	84.946	Fundulus_heteroclitus
ENSPLAG00000002471	gatc	87	65.217	ENSGMOG00000008742	gatc	100	65.217	Gadus_morhua
ENSPLAG00000002471	gatc	57	61.321	ENSGALG00000007195	-	79	59.459	Gallus_gallus
ENSPLAG00000002471	gatc	70	94.574	ENSGAFG00000012801	gatc	82	94.574	Gambusia_affinis
ENSPLAG00000002471	gatc	100	66.146	ENSGACG00000008973	gatc	99	66.146	Gasterosteus_aculeatus
ENSPLAG00000002471	gatc	69	63.281	ENSGAGG00000016018	-	70	63.281	Gopherus_agassizii
ENSPLAG00000002471	gatc	51	61.053	ENSGGOG00000026821	GATC	74	61.053	Gorilla_gorilla
ENSPLAG00000002471	gatc	98	68.984	ENSHBUG00000006827	gatc	97	68.984	Haplochromis_burtoni
ENSPLAG00000002471	gatc	60	60.714	ENSHGLG00000011394	GATC	82	60.714	Heterocephalus_glaber_female
ENSPLAG00000002471	gatc	60	58.929	ENSHGLG00100018850	-	81	58.929	Heterocephalus_glaber_male
ENSPLAG00000002471	gatc	69	78.125	ENSHCOG00000009209	gatc	100	78.125	Hippocampus_comes
ENSPLAG00000002471	gatc	70	78.295	ENSIPUG00000023072	gatc	72	69.032	Ictalurus_punctatus
ENSPLAG00000002471	gatc	54	62.000	ENSSTOG00000025740	-	65	62.000	Ictidomys_tridecemlineatus
ENSPLAG00000002471	gatc	52	62.500	ENSJJAG00000000369	Gatc	61	62.500	Jaculus_jaculus
ENSPLAG00000002471	gatc	70	82.308	ENSKMAG00000016476	gatc	100	82.308	Kryptolebias_marmoratus
ENSPLAG00000002471	gatc	88	71.166	ENSLBEG00000007603	gatc	87	71.166	Labrus_bergylta
ENSPLAG00000002471	gatc	76	58.571	ENSLACG00000018239	-	73	58.571	Latimeria_chalumnae
ENSPLAG00000002471	gatc	70	72.868	ENSLOCG00000004056	gatc	70	72.868	Lepisosteus_oculatus
ENSPLAG00000002471	gatc	51	64.211	ENSLAFG00000006384	-	62	64.211	Loxodonta_africana
ENSPLAG00000002471	gatc	56	60.952	ENSMFAG00000034197	GATC	77	60.952	Macaca_fascicularis
ENSPLAG00000002471	gatc	56	60.952	ENSMMUG00000046665	GATC	77	60.952	Macaca_mulatta
ENSPLAG00000002471	gatc	56	60.952	ENSMNEG00000034653	GATC	77	60.952	Macaca_nemestrina
ENSPLAG00000002471	gatc	56	61.905	ENSMLEG00000039862	GATC	77	61.905	Mandrillus_leucophaeus
ENSPLAG00000002471	gatc	85	75.949	ENSMAMG00000015851	gatc	87	75.949	Mastacembelus_armatus
ENSPLAG00000002471	gatc	98	69.519	ENSMZEG00005016072	gatc	97	69.519	Maylandia_zebra
ENSPLAG00000002471	gatc	57	63.208	ENSMGAG00000008733	-	100	63.208	Meleagris_gallopavo
ENSPLAG00000002471	gatc	56	59.615	ENSMAUG00000012756	Gatc	67	59.615	Mesocricetus_auratus
ENSPLAG00000002471	gatc	56	61.905	ENSMICG00000008669	-	77	61.905	Microcebus_murinus
ENSPLAG00000002471	gatc	54	61.000	ENSMOCG00000005051	Gatc	65	61.000	Microtus_ochrogaster
ENSPLAG00000002471	gatc	63	80.342	ENSMMOG00000017695	gatc	95	78.947	Mola_mola
ENSPLAG00000002471	gatc	54	61.000	ENSMODG00000003152	-	76	61.000	Monodelphis_domestica
ENSPLAG00000002471	gatc	54	60.396	MGP_CAROLIEiJ_G0027623	Gatc	65	60.396	Mus_caroli
ENSPLAG00000002471	gatc	54	60.396	ENSMUSG00000029536	Gatc	65	60.396	Mus_musculus
ENSPLAG00000002471	gatc	54	62.376	MGP_PahariEiJ_G0024203	Gatc	65	62.376	Mus_pahari
ENSPLAG00000002471	gatc	54	59.406	MGP_SPRETEiJ_G0028621	Gatc	65	59.406	Mus_spretus
ENSPLAG00000002471	gatc	56	61.905	ENSMPUG00000003183	-	77	61.905	Mustela_putorius_furo
ENSPLAG00000002471	gatc	51	60.000	ENSMLUG00000010341	-	94	60.000	Myotis_lucifugus
ENSPLAG00000002471	gatc	50	62.366	ENSNGAG00000004734	Gatc	61	62.366	Nannospalax_galili
ENSPLAG00000002471	gatc	98	69.519	ENSNBRG00000007810	gatc	97	69.519	Neolamprologus_brichardi
ENSPLAG00000002471	gatc	57	60.000	ENSNLEG00000015651	GATC	77	60.000	Nomascus_leucogenys
ENSPLAG00000002471	gatc	56	59.615	ENSMEUG00000004064	-	83	60.194	Notamacropus_eugenii
ENSPLAG00000002471	gatc	55	62.376	ENSOPRG00000004226	-	74	62.376	Ochotona_princeps
ENSPLAG00000002471	gatc	70	80.916	ENSONIG00000013444	gatc	90	80.916	Oreochromis_niloticus
ENSPLAG00000002471	gatc	54	63.000	ENSOCUG00000009867	-	74	63.000	Oryctolagus_cuniculus
ENSPLAG00000002471	gatc	65	80.165	ENSORLG00000007156	gatc	100	80.165	Oryzias_latipes
ENSPLAG00000002471	gatc	89	68.824	ENSORLG00020014991	gatc	88	68.824	Oryzias_latipes_hni
ENSPLAG00000002471	gatc	98	66.120	ENSORLG00015003450	gatc	97	66.120	Oryzias_latipes_hsok
ENSPLAG00000002471	gatc	77	76.761	ENSOMEG00000002280	gatc	76	76.761	Oryzias_melastigma
ENSPLAG00000002471	gatc	56	60.577	ENSOGAG00000003850	-	95	60.577	Otolemur_garnettii
ENSPLAG00000002471	gatc	64	51.613	ENSOARG00000012338	-	96	51.613	Ovis_aries
ENSPLAG00000002471	gatc	56	60.952	ENSPPAG00000029164	GATC	77	60.952	Pan_paniscus
ENSPLAG00000002471	gatc	56	60.952	ENSPPRG00000000929	-	77	60.952	Panthera_pardus
ENSPLAG00000002471	gatc	56	60.952	ENSPTIG00000009889	-	77	60.952	Panthera_tigris_altaica
ENSPLAG00000002471	gatc	56	60.952	ENSPTRG00000049887	GATC	78	60.952	Pan_troglodytes
ENSPLAG00000002471	gatc	56	60.000	ENSPANG00000033975	GATC	77	60.000	Papio_anubis
ENSPLAG00000002471	gatc	88	62.577	ENSPKIG00000024856	gatc	81	62.577	Paramormyrops_kingsleyae
ENSPLAG00000002471	gatc	62	65.517	ENSPSIG00000011112	-	99	65.517	Pelodiscus_sinensis
ENSPLAG00000002471	gatc	68	82.540	ENSPMGG00000018829	gatc	80	82.540	Periophthalmus_magnuspinnatus
ENSPLAG00000002471	gatc	51	64.894	ENSPEMG00000000665	Gatc	61	64.894	Peromyscus_maniculatus_bairdii
ENSPLAG00000002471	gatc	51	61.053	ENSPCIG00000025999	-	62	61.053	Phascolarctos_cinereus
ENSPLAG00000002471	gatc	100	99.459	ENSPFOG00000011603	gatc	100	99.459	Poecilia_formosa
ENSPLAG00000002471	gatc	100	98.919	ENSPMEG00000020958	gatc	100	98.919	Poecilia_mexicana
ENSPLAG00000002471	gatc	60	96.396	ENSPREG00000022256	gatc	75	96.396	Poecilia_reticulata
ENSPLAG00000002471	gatc	60	59.821	ENSPPYG00000005030	GATC	82	59.821	Pongo_abelii
ENSPLAG00000002471	gatc	63	55.085	ENSPCAG00000013864	-	87	55.085	Procavia_capensis
ENSPLAG00000002471	gatc	51	61.053	ENSPCOG00000009493	-	74	61.053	Propithecus_coquereli
ENSPLAG00000002471	gatc	50	58.511	ENSPCOG00000015558	-	73	58.511	Propithecus_coquereli
ENSPLAG00000002471	gatc	54	63.366	ENSPVAG00000002228	-	75	63.366	Pteropus_vampyrus
ENSPLAG00000002471	gatc	97	69.730	ENSPNYG00000016015	gatc	96	69.730	Pundamilia_nyererei
ENSPLAG00000002471	gatc	88	65.455	ENSPNAG00000001239	gatc	72	65.432	Pygocentrus_nattereri
ENSPLAG00000002471	gatc	53	59.596	ENSRNOG00000045621	Gatc	65	59.596	Rattus_norvegicus
ENSPLAG00000002471	gatc	54	62.376	ENSRNOG00000001161	Gatc	65	62.376	Rattus_norvegicus
ENSPLAG00000002471	gatc	56	60.000	ENSRBIG00000033363	GATC	77	60.000	Rhinopithecus_bieti
ENSPLAG00000002471	gatc	56	60.000	ENSRROG00000042802	GATC	77	60.000	Rhinopithecus_roxellana
ENSPLAG00000002471	gatc	57	59.048	ENSSBOG00000033750	-	77	59.048	Saimiri_boliviensis_boliviensis
ENSPLAG00000002471	gatc	54	62.000	ENSSHAG00000005745	-	94	62.000	Sarcophilus_harrisii
ENSPLAG00000002471	gatc	94	55.866	ENSSFOG00015002508	gatc	91	55.866	Scleropages_formosus
ENSPLAG00000002471	gatc	97	70.879	ENSSMAG00000014280	gatc	96	70.879	Scophthalmus_maximus
ENSPLAG00000002471	gatc	97	69.681	ENSSDUG00000012206	gatc	96	69.681	Seriola_dumerili
ENSPLAG00000002471	gatc	98	68.421	ENSSLDG00000025159	gatc	96	68.421	Seriola_lalandi_dorsalis
ENSPLAG00000002471	gatc	64	60.504	ENSSPUG00000015693	-	72	65.657	Sphenodon_punctatus
ENSPLAG00000002471	gatc	94	70.166	ENSSPAG00000011860	gatc	93	70.166	Stegastes_partitus
ENSPLAG00000002471	gatc	51	64.211	ENSSSCG00000032747	-	69	64.211	Sus_scrofa
ENSPLAG00000002471	gatc	58	66.355	ENSTGUG00000009561	-	99	66.355	Taeniopygia_guttata
ENSPLAG00000002471	gatc	74	80.292	ENSTRUG00000021596	gatc	69	80.292	Takifugu_rubripes
ENSPLAG00000002471	gatc	77	76.056	ENSTNIG00000015879	gatc	69	76.056	Tetraodon_nigroviridis
ENSPLAG00000002471	gatc	59	59.091	ENSTTRG00000000144	GATC	81	59.091	Tursiops_truncatus
ENSPLAG00000002471	gatc	56	61.905	ENSUAMG00000015523	-	77	61.905	Ursus_americanus
ENSPLAG00000002471	gatc	56	61.905	ENSVVUG00000021055	-	77	61.905	Vulpes_vulpes
ENSPLAG00000002471	gatc	61	96.429	ENSXCOG00000017087	gatc	82	96.429	Xiphophorus_couchianus
ENSPLAG00000002471	gatc	100	92.973	ENSXMAG00000018267	gatc	100	92.973	Xiphophorus_maculatus