EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002500 (Gene tree)
Gene ID: 106953265
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 14658 bases
Position: chrKQ545887.1:443502-458159
Accession: 106953265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000019979	RRM_1	PF00076.22	9.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014720	-	2584	XM_015041881	ENSPLAP00000019979	246 (aa)	XP_014897367	UPI0004440EE1

Gene Model

Click here to download ENSPLAG00000002500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002500	-	60	74.839	ENSPLAG00000019473	rbm24b	98	61.753
ENSPLAG00000002500	-	53	45.000	ENSPLAG00000013254	hnrnpa1b	65	45.000
ENSPLAG00000002500	-	71	66.146	ENSPLAG00000006542	rbm24a	91	60.082
ENSPLAG00000002500	-	100	61.176	ENSPLAG00000005218	rbm38	98	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002500	-	92	66.525	ENSG00000132819	RBM38	91	91.071	Homo_sapiens
ENSPLAG00000002500	-	100	87.398	ENSAPOG00000009939	-	100	87.398	Acanthochromis_polyacanthus
ENSPLAG00000002500	-	100	64.800	ENSAPOG00000003301	rbm38	98	63.529	Acanthochromis_polyacanthus
ENSPLAG00000002500	-	100	88.211	ENSACIG00000012502	-	100	91.200	Amphilophus_citrinellus
ENSPLAG00000002500	-	100	63.347	ENSACIG00000000010	rbm38	98	62.109	Amphilophus_citrinellus
ENSPLAG00000002500	-	97	84.100	ENSAOCG00000012559	RBM38	100	87.448	Amphiprion_ocellaris
ENSPLAG00000002500	-	100	64.800	ENSAOCG00000013497	-	98	63.529	Amphiprion_ocellaris
ENSPLAG00000002500	-	100	83.740	ENSAPEG00000023581	-	100	86.992	Amphiprion_percula
ENSPLAG00000002500	-	100	64.800	ENSAPEG00000013137	rbm38	98	63.529	Amphiprion_percula
ENSPLAG00000002500	-	100	86.179	ENSATEG00000016710	-	100	88.211	Anabas_testudineus
ENSPLAG00000002500	-	100	62.055	ENSATEG00000016366	rbm38	98	61.719	Anabas_testudineus
ENSPLAG00000002500	-	93	66.102	ENSACAG00000016238	RBM38	89	66.102	Anolis_carolinensis
ENSPLAG00000002500	-	92	66.525	ENSANAG00000031959	RBM38	78	95.745	Aotus_nancymaae
ENSPLAG00000002500	-	100	87.805	ENSACLG00000019514	-	100	87.805	Astatotilapia_calliptera
ENSPLAG00000002500	-	96	63.983	ENSAMXG00000038120	rbm38	97	63.983	Astyanax_mexicanus
ENSPLAG00000002500	-	100	77.642	ENSAMXG00000015601	-	100	78.049	Astyanax_mexicanus
ENSPLAG00000002500	-	92	66.383	ENSBTAG00000008105	RBM38	89	65.957	Bos_taurus
ENSPLAG00000002500	-	53	66.923	WBGene00006321	sup-12	62	79.787	Caenorhabditis_elegans
ENSPLAG00000002500	-	92	67.373	ENSCJAG00000019139	RBM38	78	95.745	Callithrix_jacchus
ENSPLAG00000002500	-	92	68.936	ENSCAFG00020021943	RBM38	89	68.220	Canis_lupus_dingo
ENSPLAG00000002500	-	99	65.079	ENSCHIG00000002609	RBM38	92	63.347	Capra_hircus
ENSPLAG00000002500	-	92	68.220	ENSCPOG00000012781	RBM38	89	67.511	Cavia_porcellus
ENSPLAG00000002500	-	92	67.373	ENSCCAG00000036872	RBM38	78	95.745	Cebus_capucinus
ENSPLAG00000002500	-	92	66.949	ENSCATG00000032133	RBM38	78	95.745	Cercocebus_atys
ENSPLAG00000002500	-	92	66.949	ENSCLAG00000005906	RBM38	78	77.297	Chinchilla_lanigera
ENSPLAG00000002500	-	92	66.949	ENSCSAG00000015503	RBM38	89	66.387	Chlorocebus_sabaeus
ENSPLAG00000002500	-	93	69.362	ENSCPBG00000024059	RBM38	99	67.660	Chrysemys_picta_bellii
ENSPLAG00000002500	-	62	62.346	ENSCING00000025102	-	71	60.714	Ciona_intestinalis
ENSPLAG00000002500	-	61	62.658	ENSCSAVG00000001132	-	72	56.410	Ciona_savignyi
ENSPLAG00000002500	-	92	51.073	ENSCANG00000030105	-	78	51.073	Colobus_angolensis_palliatus
ENSPLAG00000002500	-	92	66.383	ENSCGRG00001012928	Rbm38	89	66.383	Cricetulus_griseus_chok1gshd
ENSPLAG00000002500	-	77	61.257	ENSCSEG00000020943	rbm38	63	63.351	Cynoglossus_semilaevis
ENSPLAG00000002500	-	100	85.772	ENSCSEG00000004701	-	100	85.772	Cynoglossus_semilaevis
ENSPLAG00000002500	-	99	61.446	ENSCVAG00000015952	rbm38	98	62.109	Cyprinodon_variegatus
ENSPLAG00000002500	-	100	96.341	ENSCVAG00000005472	-	100	96.341	Cyprinodon_variegatus
ENSPLAG00000002500	-	86	78.302	ENSDARG00000058818	rbm38	85	79.227	Danio_rerio
ENSPLAG00000002500	-	92	66.094	ENSDNOG00000032004	RBM38	98	66.094	Dasypus_novemcinctus
ENSPLAG00000002500	-	92	67.797	ENSECAG00000007700	RBM38	89	65.532	Equus_caballus
ENSPLAG00000002500	-	92	66.245	ENSEEUG00000013489	RBM38	89	67.227	Erinaceus_europaeus
ENSPLAG00000002500	-	100	78.088	ENSELUG00000005849	-	100	77.689	Esox_lucius
ENSPLAG00000002500	-	86	66.355	ENSELUG00000000585	-	88	66.355	Esox_lucius
ENSPLAG00000002500	-	92	67.234	ENSFCAG00000042916	RBM38	78	94.681	Felis_catus
ENSPLAG00000002500	-	69	76.301	ENSFALG00000010805	RBM38	88	76.301	Ficedula_albicollis
ENSPLAG00000002500	-	100	62.948	ENSFHEG00000017748	rbm38	98	61.719	Fundulus_heteroclitus
ENSPLAG00000002500	-	100	89.157	ENSFHEG00000006160	-	100	91.968	Fundulus_heteroclitus
ENSPLAG00000002500	-	72	85.475	ENSGMOG00000016655	-	96	87.151	Gadus_morhua
ENSPLAG00000002500	-	93	66.667	ENSGALG00000026081	RBM38	99	67.094	Gallus_gallus
ENSPLAG00000002500	-	95	63.675	ENSGACG00000015224	rbm38	100	63.675	Gasterosteus_aculeatus
ENSPLAG00000002500	-	94	78.879	ENSGACG00000009873	-	100	78.879	Gasterosteus_aculeatus
ENSPLAG00000002500	-	93	69.362	ENSGAGG00000001187	RBM38	99	67.660	Gopherus_agassizii
ENSPLAG00000002500	-	100	64.143	ENSHBUG00000012058	rbm38	98	62.891	Haplochromis_burtoni
ENSPLAG00000002500	-	100	87.805	ENSHBUG00000011778	-	100	87.805	Haplochromis_burtoni
ENSPLAG00000002500	-	92	65.385	ENSHGLG00000015077	RBM38	89	66.807	Heterocephalus_glaber_female
ENSPLAG00000002500	-	92	51.046	ENSHCOG00000019040	rbm38	83	58.031	Hippocampus_comes
ENSPLAG00000002500	-	85	84.135	ENSHCOG00000005622	-	59	84.541	Hippocampus_comes
ENSPLAG00000002500	-	100	72.065	ENSIPUG00000019349	-	100	72.065	Ictalurus_punctatus
ENSPLAG00000002500	-	92	60.000	ENSKMAG00000012402	rbm38	98	59.244	Kryptolebias_marmoratus
ENSPLAG00000002500	-	100	61.753	ENSLBEG00000018878	rbm38	98	61.753	Labrus_bergylta
ENSPLAG00000002500	-	100	83.200	ENSLBEG00000016163	RBM38	100	84.000	Labrus_bergylta
ENSPLAG00000002500	-	100	74.390	ENSLOCG00000003456	rbm38	100	73.171	Lepisosteus_oculatus
ENSPLAG00000002500	-	92	66.949	ENSMFAG00000043808	RBM38	78	95.745	Macaca_fascicularis
ENSPLAG00000002500	-	92	66.949	ENSMMUG00000031391	RBM38	78	95.745	Macaca_mulatta
ENSPLAG00000002500	-	92	66.949	ENSMNEG00000034683	RBM38	78	95.745	Macaca_nemestrina
ENSPLAG00000002500	-	100	64.143	ENSMAMG00000024135	rbm38	98	62.891	Mastacembelus_armatus
ENSPLAG00000002500	-	100	84.553	ENSMAMG00000020499	RBM38	100	86.585	Mastacembelus_armatus
ENSPLAG00000002500	-	100	64.143	ENSMZEG00005026036	rbm38	98	62.891	Maylandia_zebra
ENSPLAG00000002500	-	100	87.805	ENSMZEG00005000849	-	100	87.805	Maylandia_zebra
ENSPLAG00000002500	-	92	67.660	ENSMAUG00000021211	Rbm38	89	67.660	Mesocricetus_auratus
ENSPLAG00000002500	-	92	69.068	ENSMICG00000038011	RBM38	98	67.373	Microcebus_murinus
ENSPLAG00000002500	-	92	67.234	ENSMOCG00000008715	Rbm38	89	67.234	Microtus_ochrogaster
ENSPLAG00000002500	-	100	84.959	ENSMMOG00000020051	-	100	86.585	Mola_mola
ENSPLAG00000002500	-	93	65.948	ENSMODG00000016458	RBM38	91	65.106	Monodelphis_domestica
ENSPLAG00000002500	-	77	90.526	ENSMALG00000004680	RBM38	72	90.526	Monopterus_albus
ENSPLAG00000002500	-	69	71.765	ENSMALG00000022327	rbm38	72	71.765	Monopterus_albus
ENSPLAG00000002500	-	92	64.103	MGP_CAROLIEiJ_G0024745	Rbm38	89	66.383	Mus_caroli
ENSPLAG00000002500	-	92	64.103	ENSMUSG00000027510	Rbm38	89	66.383	Mus_musculus
ENSPLAG00000002500	-	92	64.530	MGP_PahariEiJ_G0026186	Rbm38	89	65.957	Mus_pahari
ENSPLAG00000002500	-	92	64.103	MGP_SPRETEiJ_G0025665	Rbm38	89	66.383	Mus_spretus
ENSPLAG00000002500	-	72	77.838	ENSMPUG00000006518	RBM38	93	75.648	Mustela_putorius_furo
ENSPLAG00000002500	-	92	64.681	ENSMLUG00000011140	RBM38	98	64.255	Myotis_lucifugus
ENSPLAG00000002500	-	100	87.805	ENSNBRG00000022545	-	100	87.805	Neolamprologus_brichardi
ENSPLAG00000002500	-	100	64.542	ENSNBRG00000022685	rbm38	98	63.281	Neolamprologus_brichardi
ENSPLAG00000002500	-	92	66.949	ENSODEG00000007980	RBM38	89	66.250	Octodon_degus
ENSPLAG00000002500	-	99	64.400	ENSONIG00000017073	rbm38	100	63.137	Oreochromis_niloticus
ENSPLAG00000002500	-	99	87.755	ENSONIG00000020324	-	100	87.755	Oreochromis_niloticus
ENSPLAG00000002500	-	92	66.239	ENSOANG00000009259	RBM38	81	66.094	Ornithorhynchus_anatinus
ENSPLAG00000002500	-	100	83.401	ENSORLG00000027180	-	100	85.887	Oryzias_latipes
ENSPLAG00000002500	-	100	58.893	ENSORLG00000012154	rbm38	98	58.594	Oryzias_latipes
ENSPLAG00000002500	-	100	83.401	ENSORLG00020020751	-	100	85.887	Oryzias_latipes_hni
ENSPLAG00000002500	-	100	59.289	ENSORLG00020017871	rbm38	98	58.594	Oryzias_latipes_hni
ENSPLAG00000002500	-	100	59.289	ENSORLG00015012606	rbm38	98	58.594	Oryzias_latipes_hsok
ENSPLAG00000002500	-	100	84.553	ENSORLG00015017040	-	100	85.366	Oryzias_latipes_hsok
ENSPLAG00000002500	-	99	60.956	ENSOMEG00000006805	rbm38	96	61.382	Oryzias_melastigma
ENSPLAG00000002500	-	100	83.740	ENSOMEG00000023912	-	100	86.179	Oryzias_melastigma
ENSPLAG00000002500	-	92	66.949	ENSOGAG00000029136	RBM38	88	66.525	Otolemur_garnettii
ENSPLAG00000002500	-	92	67.234	ENSPPRG00000009507	RBM38	78	94.681	Panthera_pardus
ENSPLAG00000002500	-	72	76.757	ENSPTRG00000013661	RBM38	78	95.745	Pan_troglodytes
ENSPLAG00000002500	-	56	81.884	ENSPTRG00000045845	-	74	81.884	Pan_troglodytes
ENSPLAG00000002500	-	93	55.274	ENSPANG00000033127	-	91	53.165	Papio_anubis
ENSPLAG00000002500	-	92	66.949	ENSPANG00000020919	-	78	95.745	Papio_anubis
ENSPLAG00000002500	-	100	70.445	ENSPKIG00000018122	-	95	90.991	Paramormyrops_kingsleyae
ENSPLAG00000002500	-	100	68.526	ENSPKIG00000025417	rbm38	100	68.526	Paramormyrops_kingsleyae
ENSPLAG00000002500	-	93	68.936	ENSPSIG00000011649	RBM38	91	67.234	Pelodiscus_sinensis
ENSPLAG00000002500	-	100	79.920	ENSPMGG00000017094	-	100	79.920	Periophthalmus_magnuspinnatus
ENSPLAG00000002500	-	99	62.550	ENSPMGG00000011343	rbm38	98	62.550	Periophthalmus_magnuspinnatus
ENSPLAG00000002500	-	93	66.383	ENSPCIG00000013648	RBM38	91	65.957	Phascolarctos_cinereus
ENSPLAG00000002500	-	100	61.024	ENSPFOG00000011658	rbm38	98	60.385	Poecilia_formosa
ENSPLAG00000002500	-	100	58.268	ENSPMEG00000015770	rbm38	98	60.769	Poecilia_mexicana
ENSPLAG00000002500	-	100	61.024	ENSPREG00000007398	rbm38	98	60.385	Poecilia_reticulata
ENSPLAG00000002500	-	92	68.511	ENSPCOG00000026201	RBM38	77	95.745	Propithecus_coquereli
ENSPLAG00000002500	-	92	44.635	ENSPVAG00000006457	RBM38	89	44.635	Pteropus_vampyrus
ENSPLAG00000002500	-	100	87.805	ENSPNYG00000019727	-	100	92.000	Pundamilia_nyererei
ENSPLAG00000002500	-	100	63.745	ENSPNYG00000021373	rbm38	98	62.500	Pundamilia_nyererei
ENSPLAG00000002500	-	80	76.020	ENSPNAG00000010596	rbm38	82	76.020	Pygocentrus_nattereri
ENSPLAG00000002500	-	100	75.610	ENSPNAG00000015123	-	97	83.459	Pygocentrus_nattereri
ENSPLAG00000002500	-	92	67.234	ENSRNOG00000006420	Rbm38	89	65.957	Rattus_norvegicus
ENSPLAG00000002500	-	93	55.556	ENSRROG00000036388	-	88	54.701	Rhinopithecus_roxellana
ENSPLAG00000002500	-	92	67.797	ENSSBOG00000031053	RBM38	88	95.745	Saimiri_boliviensis_boliviensis
ENSPLAG00000002500	-	100	67.068	ENSSFOG00015004453	rbm38	100	70.281	Scleropages_formosus
ENSPLAG00000002500	-	100	86.179	ENSSDUG00000021082	RBM38	100	88.211	Seriola_dumerili
ENSPLAG00000002500	-	100	64.940	ENSSDUG00000022611	rbm38	98	64.940	Seriola_dumerili
ENSPLAG00000002500	-	100	64.940	ENSSLDG00000010845	rbm38	98	64.940	Seriola_lalandi_dorsalis
ENSPLAG00000002500	-	100	86.179	ENSSLDG00000011778	RBM38	100	88.211	Seriola_lalandi_dorsalis
ENSPLAG00000002500	-	100	85.366	ENSSPAG00000020989	RBM38	100	87.805	Stegastes_partitus
ENSPLAG00000002500	-	100	64.542	ENSSPAG00000011113	rbm38	98	63.281	Stegastes_partitus
ENSPLAG00000002500	-	92	67.234	ENSSSCG00000007504	RBM38	89	65.532	Sus_scrofa
ENSPLAG00000002500	-	96	62.656	ENSTRUG00000024954	rbm38	94	61.983	Takifugu_rubripes
ENSPLAG00000002500	-	100	82.520	ENSTRUG00000019869	-	100	85.020	Takifugu_rubripes
ENSPLAG00000002500	-	95	81.974	ENSTNIG00000007093	-	100	81.974	Tetraodon_nigroviridis
ENSPLAG00000002500	-	72	77.838	ENSUAMG00000019780	RBM38	89	66.525	Ursus_americanus
ENSPLAG00000002500	-	92	68.936	ENSVVUG00000017246	RBM38	89	68.220	Vulpes_vulpes
ENSPLAG00000002500	-	93	64.224	ENSXETG00000011268	rbm38	97	64.530	Xenopus_tropicalis
ENSPLAG00000002500	-	61	87.898	ENSXCOG00000017324	-	68	87.898	Xiphophorus_couchianus
ENSPLAG00000002500	-	100	62.948	ENSXMAG00000023662	rbm38	98	61.719	Xiphophorus_maculatus